Guide to the Human Genome
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Name: MYL6 Sequence: fasta or formatted (151aa) NCBI GI: 17986258
Description:

myosin, light chain 6, alkali, smooth muscle and non-muscle isoform 1

Referenced in:

Myosin

Other entries for this name:
alt prot [151aa] myosin, light chain 6, alkali, smooth muscle and non-muscle isofo...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3          8           1
 C cysteine            2.0          3           1
 D aspartate           7.3         11           1
 E glutamate          11.3         17           3
 F phenylalanine       5.3          8           1
 G glycine             9.3         14           1
 H histidine           2.6          4           1
 I isoleucine          2.6          4           1
 K lysine              6.0          9           1
 L leucine             8.6         13           1
 M methionine          4.6          7           1
 N asparagine          5.3          8           1
 P proline             2.0          3           1
 Q glutamine           4.0          6           1
 R arginine            3.3          5           1
 S serine              2.6          4           1
 T threonine           6.0          9           1
 V valine              9.3         14           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin, light chain 6, alkali, smooth muscle and non... 
MYL6                  0.965   myosin, light chain 6, alkali, smooth muscle and non...
MYL6B                 0.806   smooth muscle and non-muscle myosin alkali light chai...
MYL4                  0.764   atrial/embryonic alkali myosin light chain 
MYL4                  0.764   atrial/embryonic alkali myosin light chain 
MYL1                  0.739   fast skeletal myosin alkali light chain 1 isoform 3f...
MYL1                  0.732   fast skeletal myosin alkali light chain 1 isoform 1f...
MYL3                  0.725   slow skeletal ventricular myosin alkali light chain 3...
CALM3                 0.366   calmodulin 3 
CALM2                 0.366   calmodulin 2 
CALM1                 0.366   calmodulin 1 
CALML3                0.363   calmodulin-like 3 
TNNC2                 0.222   fast skeletal muscle troponin C 
TNNC1                 0.197   troponin C, slow 
CETN1                 0.187   centrin 1 
CALML4                0.176   calmodulin-like 4 isoform 1 
CETN2                 0.176   caltractin 
CALML5                0.173   calmodulin-like 5 
CETN3                 0.158   centrin 3 
MYL12A                0.158   myosin, light chain 12A, regulatory, non-sarcomeric [...
MYL12B                0.155   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.155   myosin regulatory light chain MRCL2 isoform B [Homo...
MYL12B                0.155   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.155   myosin regulatory light chain MRCL2 isoform A 
CALML6                0.155   calmodulin-like 6 
CABP2                 0.151   calcium binding protein 2 isoform 2 
CABP2                 0.151   calcium binding protein 2 isoform 1 
MYL9                  0.148   myosin regulatory light chain 9 isoform a 
LOC391722             0.141   PREDICTED: similar to myosin regulatory light chain...
LOC391722             0.137   PREDICTED: similar to myosin regulatory light chain ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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