Guide to the Human Genome
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Name: CETN2 Sequence: fasta or formatted (172aa) NCBI GI: 4757902
Description:

caltractin

Referenced in:

Centrosome

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         10           1
 C cysteine            0.0          0           0
 D aspartate           8.7         15           3
 E glutamate          14.0         24           2
 F phenylalanine       5.8         10           1
 G glycine             5.8         10           1
 H histidine           0.0          0           0
 I isoleucine          5.2          9           1
 K lysine             14.0         24           2
 L leucine             7.6         13           1
 M methionine          5.8         10           1
 N asparagine          2.9          5           1
 P proline             1.7          3           1
 Q glutamine           3.5          6           1
 R arginine            4.1          7           1
 S serine              5.8         10           3
 T threonine           5.8         10           1
 V valine              2.9          5           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   caltractin 
CETN1                 0.868   centrin 1 
CETN3                 0.508   centrin 3 
CALM3                 0.408   calmodulin 3 
CALM2                 0.408   calmodulin 2 
CALM1                 0.408   calmodulin 1 
CALML3                0.386   calmodulin-like 3 
TNNC2                 0.309   fast skeletal muscle troponin C 
TNNC1                 0.277   troponin C, slow 
CALML5                0.264   calmodulin-like 5 
CALML4                0.225   calmodulin-like 4 isoform 1 
CALML6                0.222   calmodulin-like 6 
CABP5                 0.212   calcium binding protein 5 
MYL12A                0.206   myosin, light chain 12A, regulatory, non-sarcomeric [...
MYL9                  0.203   myosin regulatory light chain 9 isoform a 
CABP2                 0.199   calcium binding protein 2 isoform 2 
CABP1                 0.196   calcium binding protein 1 isoform 1 
CABP2                 0.196   calcium binding protein 2 isoform 1 
MYL12B                0.190   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.190   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.190   myosin regulatory light chain MRCL2 isoform A 
CABP1                 0.190   calcium binding protein 1 isoform 3 
CABP1                 0.190   calcium binding protein 1 isoform 2 
MYL12B                0.190   myosin regulatory light chain MRCL2 isoform B [Homo...
CABP4                 0.190   calcium binding protein 4 
MYL5                  0.183   myosin regulatory light chain 5 
EFCAB2                0.174   EF-hand calcium binding domain 2 isoform a 
MYL6B                 0.164   smooth muscle and non-muscle myosin alkali light chai...
MYL6                  0.161   myosin, light chain 6, alkali, smooth muscle and non...
MYL1                  0.161   fast skeletal myosin alkali light chain 1 isoform 1f...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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