Guide to the Human Genome
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Name: MYL5 Sequence: fasta or formatted (173aa) NCBI GI: 4505305
Description:

myosin regulatory light chain 5

Referenced in:

Myosin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         15           1
 C cysteine            0.0          0           0
 D aspartate           8.7         15           2
 E glutamate           9.8         17           2
 F phenylalanine       6.4         11           1
 G glycine             6.4         11           2
 H histidine           0.6          1           1
 I isoleucine          4.6          8           1
 K lysine             11.0         19           3
 L leucine             8.7         15           2
 M methionine          4.6          8           1
 N asparagine          5.2          9           1
 P proline             1.2          2           1
 Q glutamine           4.6          8           1
 R arginine            2.9          5           1
 S serine              5.8         10           2
 T threonine           5.8         10           1
 V valine              2.9          5           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin regulatory light chain 5 
MYL2                  0.648   slow cardiac myosin regulatory light chain 2 
MYL7                  0.638   myosin light chain 2a 
MYLPF                 0.581   myosin light chain, phosphorylatable, fast skeletal ...
MYL10                 0.565   myosin, light chain 10, regulatory 
MYL12A                0.505   myosin, light chain 12A, regulatory, non-sarcomeric [...
MYL12B                0.498   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.498   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.498   myosin regulatory light chain MRCL2 isoform A 
MYL9                  0.489   myosin regulatory light chain 9 isoform a 
MYL12B                0.454   myosin regulatory light chain MRCL2 isoform B [Homo...
LOC391722             0.438   PREDICTED: similar to myosin regulatory light chain...
LOC391722             0.432   PREDICTED: similar to myosin regulatory light chain ...
LOC391722             0.432   PREDICTED: similar to myosin regulatory light chain ...
CALM3                 0.222   calmodulin 3 
CALM2                 0.222   calmodulin 2 
CALM1                 0.222   calmodulin 1 
CALML3                0.197   calmodulin-like 3 
MYL9                  0.184   myosin regulatory light chain 9 isoform b 
CETN2                 0.181   caltractin 
CETN1                 0.162   centrin 1 
CETN3                 0.133   centrin 3 
CALML4                0.133   calmodulin-like 4 isoform 1 
MYL6B                 0.111   smooth muscle and non-muscle myosin alkali light chai...
TNNC2                 0.105   fast skeletal muscle troponin C 
CABP5                 0.102   calcium binding protein 5 
CALML5                0.098   calmodulin-like 5 
CABP2                 0.098   calcium binding protein 2 isoform 1 
CALML6                0.095   calmodulin-like 6 
MYL6                  0.092   myosin, light chain 6, alkali, smooth muscle and non...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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