Guide to the Human Genome
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Name: MYL1 Sequence: fasta or formatted (194aa) NCBI GI: 17986273
Description:

fast skeletal myosin alkali light chain 1 isoform 1f

Referenced in:

Myosin

Other entries for this name:
alt prot [150aa] fast skeletal myosin alkali light chain 1 isoform 3f
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.4         26           6
 C cysteine            0.5          1           1
 D aspartate           5.2         10           1
 E glutamate          11.3         22           3
 F phenylalanine       4.6          9           1
 G glycine             5.7         11           1
 H histidine           1.0          2           1
 I isoleucine          4.6          9           1
 K lysine              9.8         19           2
 L leucine             7.2         14           2
 M methionine          3.6          7           2
 N asparagine          5.2         10           2
 P proline             6.7         13           1
 Q glutamine           3.6          7           2
 R arginine            2.6          5           1
 S serine              4.1          8           1
 T threonine           3.6          7           1
 V valine              6.2         12           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fast skeletal myosin alkali light chain 1 isoform 1f... 
MYL1                  0.725   fast skeletal myosin alkali light chain 1 isoform 3f...
MYL4                  0.700   atrial/embryonic alkali myosin light chain 
MYL4                  0.700   atrial/embryonic alkali myosin light chain 
MYL3                  0.683   slow skeletal ventricular myosin alkali light chain 3...
MYL6B                 0.655   smooth muscle and non-muscle myosin alkali light chai...
MYL6                  0.583   myosin, light chain 6, alkali, smooth muscle and non...
MYL6                  0.555   myosin, light chain 6, alkali, smooth muscle and non...
CALML3                0.269   calmodulin-like 3 
CALM3                 0.258   calmodulin 3 
CALM2                 0.258   calmodulin 2 
CALM1                 0.258   calmodulin 1 
TNNC2                 0.160   fast skeletal muscle troponin C 
CALML5                0.151   calmodulin-like 5 
CETN1                 0.148   centrin 1 
TNNC1                 0.143   troponin C, slow 
CETN2                 0.140   caltractin 
CETN3                 0.137   centrin 3 
CALML4                0.132   calmodulin-like 4 isoform 1 
CABP2                 0.129   calcium binding protein 2 isoform 2 
CABP2                 0.129   calcium binding protein 2 isoform 1 
CALML6                0.123   calmodulin-like 6 
MYL12B                0.123   myosin regulatory light chain MRCL2 isoform B [Homo...
MYL12B                0.120   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.120   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.120   myosin regulatory light chain MRCL2 isoform A 
MYL12A                0.115   myosin, light chain 12A, regulatory, non-sarcomeric [...
MYL9                  0.109   myosin regulatory light chain 9 isoform a 
LOC391722             0.109   PREDICTED: similar to myosin regulatory light chain...
EFCAB2                0.109   EF-hand calcium binding domain 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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