| Name: TNNC1 | Sequence: fasta or formatted (161aa) | NCBI GI: 4507615 | |
|
Description: troponin C, slow
|
Referenced in:
| ||
|
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.3 7 2 C cysteine 1.2 2 1 D aspartate 14.3 23 2 E glutamate 14.3 23 3 F phenylalanine 5.6 9 1 G glycine 7.5 12 1 H histidine 0.0 0 0 I isoleucine 5.6 9 1 K lysine 8.1 13 1 L leucine 8.1 13 1 M methionine 6.8 11 2 N asparagine 3.1 5 2 P proline 1.2 2 1 Q glutamine 3.1 5 1 R arginine 2.5 4 1 S serine 3.1 5 1 T threonine 4.3 7 1 V valine 5.0 8 1 W tryptophan 0.0 0 0 Y tyrosine 1.9 3 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 troponin C, slow TNNC2 0.599 fast skeletal muscle troponin C CALM3 0.435 calmodulin 3 CALM2 0.435 calmodulin 2 CALM1 0.435 calmodulin 1 CALML3 0.411 calmodulin-like 3 CETN1 0.298 centrin 1 CETN2 0.288 caltractin CALML6 0.268 calmodulin-like 6 CALML5 0.231 calmodulin-like 5 CABP1 0.231 calcium binding protein 1 isoform 3 CABP1 0.231 calcium binding protein 1 isoform 2 CABP1 0.231 calcium binding protein 1 isoform 1 CABP5 0.224 calcium binding protein 5 CABP2 0.221 calcium binding protein 2 isoform 2 CABP2 0.221 calcium binding protein 2 isoform 1 MYL6B 0.211 smooth muscle and non-muscle myosin alkali light chai... CABP4 0.204 calcium binding protein 4 CALML4 0.197 calmodulin-like 4 isoform 1 MYL6 0.191 myosin, light chain 6, alkali, smooth muscle and non... MYL6 0.187 myosin, light chain 6, alkali, smooth muscle and non... MYL3 0.181 slow skeletal ventricular myosin alkali light chain 3... CETN3 0.177 centrin 3 MYL1 0.171 fast skeletal myosin alkali light chain 1 isoform 1f... MYL9 0.157 myosin regulatory light chain 9 isoform a MYL1 0.151 fast skeletal myosin alkali light chain 1 isoform 3f... MYL12A 0.151 myosin, light chain 12A, regulatory, non-sarcomeric [... MYL4 0.147 atrial/embryonic alkali myosin light chain MYL4 0.147 atrial/embryonic alkali myosin light chain LOC100292202 0.144 PREDICTED: similar to solute carrier family 25, mem...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
