Guide to the Human Genome
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Name: MYL12A Sequence: fasta or formatted (171aa) NCBI GI: 5453740
Description:

myosin, light chain 12A, regulatory, non-sarcomeric

Referenced in:

Myosin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         11           1
 C cysteine            0.6          1           1
 D aspartate          11.1         19           2
 E glutamate           9.4         16           2
 F phenylalanine       7.6         13           1
 G glycine             5.3          9           1
 H histidine           1.2          2           1
 I isoleucine          5.3          9           1
 K lysine              8.2         14           2
 L leucine             6.4         11           2
 M methionine          5.3          9           2
 N asparagine          5.8         10           1
 P proline             3.5          6           1
 Q glutamine           3.5          6           1
 R arginine            5.3          9           1
 S serine              2.9          5           2
 T threonine           8.2         14           2
 V valine              1.8          3           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin, light chain 12A, regulatory, non-sarcomeric [... 
MYL12B                0.969   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.969   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.969   myosin regulatory light chain MRCL2 isoform A 
MYL9                  0.929   myosin regulatory light chain 9 isoform a 
MYL12B                0.877   myosin regulatory light chain MRCL2 isoform B [Homo...
LOC391722             0.840   PREDICTED: similar to myosin regulatory light chain ...
LOC391722             0.840   PREDICTED: similar to myosin regulatory light chain ...
LOC391722             0.831   PREDICTED: similar to myosin regulatory light chain...
MYL2                  0.511   slow cardiac myosin regulatory light chain 2 
MYL5                  0.489   myosin regulatory light chain 5 
MYLPF                 0.483   myosin light chain, phosphorylatable, fast skeletal ...
MYL7                  0.446   myosin light chain 2a 
MYL10                 0.428   myosin, light chain 10, regulatory 
MYL9                  0.385   myosin regulatory light chain 9 isoform b 
CALM3                 0.302   calmodulin 3 
CALM2                 0.302   calmodulin 2 
CALM1                 0.302   calmodulin 1 
CALML3                0.274   calmodulin-like 3 
CETN2                 0.197   caltractin 
CETN1                 0.191   centrin 1 
CALML4                0.182   calmodulin-like 4 isoform 1 
TNNC2                 0.160   fast skeletal muscle troponin C 
CALML5                0.157   calmodulin-like 5 
MYL6B                 0.145   smooth muscle and non-muscle myosin alkali light chai...
MYL6                  0.145   myosin, light chain 6, alkali, smooth muscle and non...
TNNC1                 0.138   troponin C, slow 
MYL6                  0.138   myosin, light chain 6, alkali, smooth muscle and non...
CABP2                 0.135   calcium binding protein 2 isoform 1 
CETN3                 0.132   centrin 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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