Guide to the Human Genome
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Name: CALML4 Sequence: fasta or formatted (196aa) NCBI GI: 110227594
Description:

calmodulin-like 4 isoform 1

Referenced in:

Calmodulin and Calcium

Other entries for this name:
alt prot [149aa] calmodulin-like 4 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         11           2
 C cysteine            1.0          2           1
 D aspartate           7.1         14           2
 E glutamate           7.7         15           1
 F phenylalanine       3.6          7           1
 G glycine             9.2         18           2
 H histidine           3.1          6           1
 I isoleucine          4.6          9           1
 K lysine              9.7         19           2
 L leucine            10.2         20           2
 M methionine          4.6          9           1
 N asparagine          1.5          3           1
 P proline             5.6         11           3
 Q glutamine           4.1          8           2
 R arginine            5.1         10           1
 S serine              6.6         13           2
 T threonine           5.1         10           1
 V valine              3.1          6           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.6          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calmodulin-like 4 isoform 1 
CALML4                0.680   calmodulin-like 4 isoform 2 
CALM3                 0.293   calmodulin 3 
CALM2                 0.293   calmodulin 2 
CALM1                 0.293   calmodulin 1 
CALML3                0.250   calmodulin-like 3 
CETN1                 0.202   centrin 1 
CETN2                 0.188   caltractin 
MYL9                  0.164   myosin regulatory light chain 9 isoform a 
TNNC2                 0.161   fast skeletal muscle troponin C 
MYL12B                0.159   myosin regulatory light chain MRCL2 isoform B [Homo...
MYL12A                0.159   myosin, light chain 12A, regulatory, non-sarcomeric [...
TNNC1                 0.159   troponin C, slow 
MYL12B                0.156   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.156   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.156   myosin regulatory light chain MRCL2 isoform A 
CALML6                0.151   calmodulin-like 6 
CALML5                0.151   calmodulin-like 5 
MYL4                  0.145   atrial/embryonic alkali myosin light chain 
MYL4                  0.145   atrial/embryonic alkali myosin light chain 
MYL6B                 0.145   smooth muscle and non-muscle myosin alkali light chai...
LOC391722             0.145   PREDICTED: similar to myosin regulatory light chain...
LOC391722             0.142   PREDICTED: similar to myosin regulatory light chain ...
LOC391722             0.142   PREDICTED: similar to myosin regulatory light chain ...
CETN3                 0.137   centrin 3 
MYL6                  0.134   myosin, light chain 6, alkali, smooth muscle and non...
MYL6                  0.134   myosin, light chain 6, alkali, smooth muscle and non...
MYL2                  0.132   slow cardiac myosin regulatory light chain 2 
CABP1                 0.132   calcium binding protein 1 isoform 3 
MYL1                  0.132   fast skeletal myosin alkali light chain 1 isoform 3f...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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