| Name: TNNC2 | Sequence: fasta or formatted (160aa) | NCBI GI: 4507617 | |
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Description: fast skeletal muscle troponin C
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 7.5 12 2 C cysteine 0.6 1 1 D aspartate 11.9 19 1 E glutamate 16.2 26 3 F phenylalanine 6.2 10 1 G glycine 8.1 13 3 H histidine 0.6 1 1 I isoleucine 6.2 10 2 K lysine 5.6 9 1 L leucine 5.6 9 1 M methionine 6.9 11 2 N asparagine 1.9 3 2 P proline 1.2 2 1 Q glutamine 3.1 5 2 R arginine 4.4 7 1 S serine 4.4 7 1 T threonine 3.8 6 1 V valine 4.4 7 1 W tryptophan 0.0 0 0 Y tyrosine 1.2 2 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 fast skeletal muscle troponin C TNNC1 0.611 troponin C, slow CALM3 0.464 calmodulin 3 CALM2 0.464 calmodulin 2 CALM1 0.464 calmodulin 1 CALML3 0.416 calmodulin-like 3 CETN2 0.328 caltractin CETN1 0.324 centrin 1 CALML6 0.300 calmodulin-like 6 CABP1 0.263 calcium binding protein 1 isoform 3 CABP1 0.263 calcium binding protein 1 isoform 2 CABP1 0.263 calcium binding protein 1 isoform 1 CALML5 0.259 calmodulin-like 5 CABP5 0.259 calcium binding protein 5 CABP2 0.253 calcium binding protein 2 isoform 2 CABP2 0.253 calcium binding protein 2 isoform 1 CABP4 0.253 calcium binding protein 4 MYL6B 0.232 smooth muscle and non-muscle myosin alkali light chai... CETN3 0.225 centrin 3 MYL6 0.222 myosin, light chain 6, alkali, smooth muscle and non... MYL6 0.215 myosin, light chain 6, alkali, smooth muscle and non... CALML4 0.205 calmodulin-like 4 isoform 1 MYL1 0.205 fast skeletal myosin alkali light chain 1 isoform 3f... MYL1 0.195 fast skeletal myosin alkali light chain 1 isoform 1f... EFCAB2 0.184 EF-hand calcium binding domain 2 isoform a MYL3 0.177 slow skeletal ventricular myosin alkali light chain 3... MYL12A 0.177 myosin, light chain 12A, regulatory, non-sarcomeric [... PPP3R1 0.174 protein phosphatase 3, regulatory subunit B, alpha is... MYL9 0.171 myosin regulatory light chain 9 isoform a MYL12B 0.167 myosin regulatory light chain MRCL2 isoform A [Homo...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
