Guide to the Human Genome
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Name: MYL6 Sequence: fasta or formatted (151aa) NCBI GI: 88999583
Description:

myosin, light chain 6, alkali, smooth muscle and non-muscle isoform 2

Referenced in:

Myosin

Other entries for this name:
alt prot [151aa] myosin, light chain 6, alkali, smooth muscle and non-muscle isofo...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6          7           1
 C cysteine            2.0          3           1
 D aspartate           7.3         11           1
 E glutamate          11.9         18           3
 F phenylalanine       4.6          7           1
 G glycine             9.3         14           1
 H histidine           2.0          3           1
 I isoleucine          2.0          3           1
 K lysine              6.0          9           1
 L leucine             9.3         14           1
 M methionine          5.3          8           1
 N asparagine          6.0          9           1
 P proline             2.0          3           1
 Q glutamine           4.0          6           1
 R arginine            3.3          5           1
 S serine              2.0          3           1
 T threonine           6.0          9           1
 V valine              9.9         15           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin, light chain 6, alkali, smooth muscle and non... 
MYL6                  0.968   myosin, light chain 6, alkali, smooth muscle and non...
MYL6B                 0.774   smooth muscle and non-muscle myosin alkali light chai...
MYL4                  0.735   atrial/embryonic alkali myosin light chain 
MYL4                  0.735   atrial/embryonic alkali myosin light chain 
MYL1                  0.707   fast skeletal myosin alkali light chain 1 isoform 3f...
MYL1                  0.700   fast skeletal myosin alkali light chain 1 isoform 1f...
MYL3                  0.693   slow skeletal ventricular myosin alkali light chain 3...
CALM3                 0.375   calmodulin 3 
CALM2                 0.375   calmodulin 2 
CALM1                 0.375   calmodulin 1 
CALML3                0.364   calmodulin-like 3 
TNNC2                 0.230   fast skeletal muscle troponin C 
TNNC1                 0.201   troponin C, slow 
CETN1                 0.191   centrin 1 
CALML5                0.184   calmodulin-like 5 
CETN2                 0.177   caltractin 
CALML4                0.177   calmodulin-like 4 isoform 1 
MYL12A                0.166   myosin, light chain 12A, regulatory, non-sarcomeric [...
MYL12B                0.163   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.163   myosin regulatory light chain MRCL2 isoform B [Homo...
MYL12B                0.163   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.163   myosin regulatory light chain MRCL2 isoform A 
CALML6                0.163   calmodulin-like 6 
CETN3                 0.163   centrin 3 
CABP2                 0.159   calcium binding protein 2 isoform 2 
CABP2                 0.159   calcium binding protein 2 isoform 1 
MYL9                  0.155   myosin regulatory light chain 9 isoform a 
MYL2                  0.148   slow cardiac myosin regulatory light chain 2 
LOC391722             0.148   PREDICTED: similar to myosin regulatory light chain...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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