Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 46370086
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46370086 transcription factor 12 isoform c [Homo sapiens]
(512 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46370086 transcription factor 12 isoform c [Homo sapiens] 1034 0.0
gi|46370084 transcription factor 12 isoform b [Homo sapiens] 983 0.0
gi|4507391 transcription factor 12 isoform b [Homo sapiens] 983 0.0
gi|46370082 transcription factor 12 isoform a [Homo sapiens] 969 0.0
gi|46370080 transcription factor 12 isoform a [Homo sapiens] 969 0.0
gi|145312267 transcription factor 4 isoform a [Homo sapiens] 612 e-175
gi|4507399 transcription factor 4 isoform b [Homo sapiens] 606 e-173
gi|27777636 transcription factor 3 isoform E12 [Homo sapiens] 437 e-122
gi|209915594 transcription factor 3 isoform E47 [Homo sapiens] 421 e-118
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 58 2e-08
gi|151301154 mucin 6, gastric [Homo sapiens] 54 3e-07
gi|118498337 HECT domain containing 1 [Homo sapiens] 48 2e-05
gi|28559039 mediator complex subunit 1 [Homo sapiens] 47 4e-05
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 47 5e-05
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 45 1e-04
gi|239752523 PREDICTED: intestinal mucin-like, partial [Homo sap... 45 2e-04
gi|47716512 mex-3 homolog B [Homo sapiens] 45 2e-04
gi|83367077 mucin 16 [Homo sapiens] 45 2e-04
gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens] 44 3e-04
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 44 4e-04
gi|38683827 ADAM metallopeptidase with thrombospondin type 1 mot... 44 5e-04
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 43 6e-04
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 43 6e-04
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 43 6e-04
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 43 6e-04
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 43 6e-04
gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ... 43 8e-04
gi|67782356 corneodesmosin precursor [Homo sapiens] 43 8e-04
gi|57864582 hornerin [Homo sapiens] 42 0.001
gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens] 42 0.001
>gi|46370086 transcription factor 12 isoform c [Homo sapiens]
Length = 512
Score = 1034 bits (2673), Expect = 0.0
Identities = 512/512 (100%), Positives = 512/512 (100%)
Query: 1 MYCAYPVPGMGSNSLMYYYNGKTVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDG 60
MYCAYPVPGMGSNSLMYYYNGKTVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDG
Sbjct: 1 MYCAYPVPGMGSNSLMYYYNGKTVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDG 60
Query: 61 THNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTS 120
THNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTS
Sbjct: 61 THNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTS 120
Query: 121 LPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPD 180
LPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPD
Sbjct: 121 LPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPD 180
Query: 181 HTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDA 240
HTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDA
Sbjct: 181 HTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDA 240
Query: 241 IHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHR 300
IHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHR
Sbjct: 241 IHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHR 300
Query: 301 EDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLH 360
EDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLH
Sbjct: 301 EDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLH 360
Query: 361 EPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRV 420
EPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRV
Sbjct: 361 EPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRV 420
Query: 421 RDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRRE 480
RDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRRE
Sbjct: 421 RDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRRE 480
Query: 481 EEKVSAVSAEPPTTLPGTHPGLSETTNPMGHM 512
EEKVSAVSAEPPTTLPGTHPGLSETTNPMGHM
Sbjct: 481 EEKVSAVSAEPPTTLPGTHPGLSETTNPMGHM 512
>gi|46370084 transcription factor 12 isoform b [Homo sapiens]
Length = 682
Score = 983 bits (2541), Expect = 0.0
Identities = 489/490 (99%), Positives = 490/490 (100%)
Query: 23 TVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGI 82
+VYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGI
Sbjct: 193 SVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGI 252
Query: 83 LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH 142
LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH
Sbjct: 253 LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH 312
Query: 143 TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTG 202
TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTG
Sbjct: 313 TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTG 372
Query: 203 TSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDI 262
TSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDI
Sbjct: 373 TSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDI 432
Query: 263 HSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSST 322
HSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSST
Sbjct: 433 HSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSST 492
Query: 323 DLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVS 382
DLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVS
Sbjct: 493 DLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVS 552
Query: 383 SRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEK 442
SRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEK
Sbjct: 553 SRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEK 612
Query: 443 PQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSAVSAEPPTTLPGTHPGL 502
PQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSAVSAEPPTTLPGTHPGL
Sbjct: 613 PQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSAVSAEPPTTLPGTHPGL 672
Query: 503 SETTNPMGHM 512
SETTNPMGHM
Sbjct: 673 SETTNPMGHM 682
>gi|4507391 transcription factor 12 isoform b [Homo sapiens]
Length = 682
Score = 983 bits (2541), Expect = 0.0
Identities = 489/490 (99%), Positives = 490/490 (100%)
Query: 23 TVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGI 82
+VYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGI
Sbjct: 193 SVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGI 252
Query: 83 LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH 142
LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH
Sbjct: 253 LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH 312
Query: 143 TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTG 202
TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTG
Sbjct: 313 TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTG 372
Query: 203 TSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDI 262
TSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDI
Sbjct: 373 TSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDI 432
Query: 263 HSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSST 322
HSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSST
Sbjct: 433 HSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSST 492
Query: 323 DLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVS 382
DLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVS
Sbjct: 493 DLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVS 552
Query: 383 SRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEK 442
SRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEK
Sbjct: 553 SRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEK 612
Query: 443 PQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSAVSAEPPTTLPGTHPGL 502
PQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSAVSAEPPTTLPGTHPGL
Sbjct: 613 PQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSAVSAEPPTTLPGTHPGL 672
Query: 503 SETTNPMGHM 512
SETTNPMGHM
Sbjct: 673 SETTNPMGHM 682
>gi|46370082 transcription factor 12 isoform a [Homo sapiens]
Length = 706
Score = 969 bits (2506), Expect = 0.0
Identities = 489/514 (95%), Positives = 490/514 (95%), Gaps = 24/514 (4%)
Query: 23 TVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGI 82
+VYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGI
Sbjct: 193 SVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGI 252
Query: 83 LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH 142
LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH
Sbjct: 253 LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH 312
Query: 143 TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTG 202
TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTG
Sbjct: 313 TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTG 372
Query: 203 TSQWPRPGGQAPSSPSYENSLHSL------------------------QSRMEDRLDRLD 238
TSQWPRPGGQAPSSPSYENSLHSL QSRMEDRLDRLD
Sbjct: 373 TSQWPRPGGQAPSSPSYENSLHSLKNRVEQQLHEHLQDAMSFLKDVCEQSRMEDRLDRLD 432
Query: 239 DAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGT 298
DAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGT
Sbjct: 433 DAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGT 492
Query: 299 HREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDEN 358
HREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDEN
Sbjct: 493 HREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDEN 552
Query: 359 LHEPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERL 418
LHEPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERL
Sbjct: 553 LHEPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERL 612
Query: 419 RVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKR 478
RVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKR
Sbjct: 613 RVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKR 672
Query: 479 REEEKVSAVSAEPPTTLPGTHPGLSETTNPMGHM 512
REEEKVSAVSAEPPTTLPGTHPGLSETTNPMGHM
Sbjct: 673 REEEKVSAVSAEPPTTLPGTHPGLSETTNPMGHM 706
>gi|46370080 transcription factor 12 isoform a [Homo sapiens]
Length = 706
Score = 969 bits (2506), Expect = 0.0
Identities = 489/514 (95%), Positives = 490/514 (95%), Gaps = 24/514 (4%)
Query: 23 TVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGI 82
+VYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGI
Sbjct: 193 SVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGI 252
Query: 83 LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH 142
LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH
Sbjct: 253 LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH 312
Query: 143 TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTG 202
TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTG
Sbjct: 313 TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTG 372
Query: 203 TSQWPRPGGQAPSSPSYENSLHSL------------------------QSRMEDRLDRLD 238
TSQWPRPGGQAPSSPSYENSLHSL QSRMEDRLDRLD
Sbjct: 373 TSQWPRPGGQAPSSPSYENSLHSLKNRVEQQLHEHLQDAMSFLKDVCEQSRMEDRLDRLD 432
Query: 239 DAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGT 298
DAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGT
Sbjct: 433 DAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGT 492
Query: 299 HREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDEN 358
HREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDEN
Sbjct: 493 HREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDEN 552
Query: 359 LHEPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERL 418
LHEPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERL
Sbjct: 553 LHEPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERL 612
Query: 419 RVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKR 478
RVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKR
Sbjct: 613 RVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKR 672
Query: 479 REEEKVSAVSAEPPTTLPGTHPGLSETTNPMGHM 512
REEEKVSAVSAEPPTTLPGTHPGLSETTNPMGHM
Sbjct: 673 REEEKVSAVSAEPPTTLPGTHPGLSETTNPMGHM 706
>gi|145312267 transcription factor 4 isoform a [Homo sapiens]
Length = 671
Score = 612 bits (1579), Expect = e-175
Identities = 332/503 (66%), Positives = 397/503 (78%), Gaps = 27/503 (5%)
Query: 23 TVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGI 82
+VYAPS ++ D+NR+SP YPS KP TS F S+FFMQDG H+SSD WSSS+GM+QPG+ G+
Sbjct: 183 SVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDG-HHSSDPWSSSSGMNQPGYAGM 241
Query: 83 LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH 142
LG S SH+ QSSSY +LH H+RLSYP HS + DIN+SLPPMS+FHR T+ Y +S
Sbjct: 242 LGNS-SHIPQSSSYCSLHPHERLSYPSHSSA--DINSSLPPMSTFHRSGTNH--YSTSSC 296
Query: 143 TPPINGSDSILGTRGN-AAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLT 201
TPP NG+DSI+ RG+ AAGSSQTGDALGKALASIYSPDHT++SF SNPSTPVGSP L+
Sbjct: 297 TPPANGTDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLS 356
Query: 202 -GTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHS 260
GT+ W R GGQA SSP+YE LHSLQSR+EDRL+RLDDAIHVLRNHAVGPST++P GH
Sbjct: 357 AGTAVWSRNGGQASSSPNYEGPLHSLQSRIEDRLERLDDAIHVLRNHAVGPSTAMPGGHG 416
Query: 261 DIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTV--- 317
D+H ++GPSHN +G L S YG + L++++R + MVGTHRED V+L G+HS+L + V
Sbjct: 417 DMHGIIGPSHNGAMGGLGSGYG-TGLLSANRHSLMVGTHREDGVALRGSHSLLPNQVPVP 475
Query: 318 -----TTSSTDLNHKTQENYRG---GLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMK 369
+ +S DLN Q+ YRG GLQ QS + ++EIK+++ E DENL + SS+D K
Sbjct: 476 QLPVQSATSPDLN-PPQDPYRGMPPGLQGQSVSSGSSEIKSDD-EGDENLQDTKSSEDKK 533
Query: 370 SDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKE 429
DD+ +KDIK +R R SS N+DEDL PEQK EREKERRMANNARERLRVRDINEAFKE
Sbjct: 534 LDDD--KKDIKSITRSR-SSNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKE 590
Query: 430 LGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSAVSA 489
LGRM QLHLKS+KPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVS S
Sbjct: 591 LGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVS--SE 648
Query: 490 EPPTTLPGTHPGLSETTNPMGHM 512
PP +L G HPG+ + +N MG M
Sbjct: 649 PPPLSLAGPHPGMGDASNHMGQM 671
>gi|4507399 transcription factor 4 isoform b [Homo sapiens]
Length = 667
Score = 606 bits (1563), Expect = e-173
Identities = 329/503 (65%), Positives = 394/503 (78%), Gaps = 31/503 (6%)
Query: 23 TVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGI 82
+VYAPS ++ D+NR+SP YPS KP TS F S+FFMQDG H+SSD WSSS+GM+QPG+ G+
Sbjct: 183 SVYAPSASTADYNRDSPGYPSSKPATSTFPSSFFMQDG-HHSSDPWSSSSGMNQPGYAGM 241
Query: 83 LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH 142
LG S SH+ QSSSY +LH H+RLSYP HS + DIN+SLPPMS+FHR T+ Y +S
Sbjct: 242 LGNS-SHIPQSSSYCSLHPHERLSYPSHSSA--DINSSLPPMSTFHRSGTNH--YSTSSC 296
Query: 143 TPPINGSDSILGTRGN-AAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLT 201
TPP NG+DSI+ RG+ AAGSSQTGDALGKALASIYSPDHT++SF SNPSTPVGSP L+
Sbjct: 297 TPPANGTDSIMANRGSGAAGSSQTGDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLS 356
Query: 202 -GTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHS 260
GT+ W R GGQA SSP+YE LHSLQSR+EDRL+RLDDAIHVLRNHAVGPST++P GH
Sbjct: 357 AGTAVWSRNGGQASSSPNYEGPLHSLQSRIEDRLERLDDAIHVLRNHAVGPSTAMPGGHG 416
Query: 261 DIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTV--- 317
D+H ++GPSHN +G L S YG + L++++R + MVGTHRED V+L G+HS+L + V
Sbjct: 417 DMHGIIGPSHNGAMGGLGSGYG-TGLLSANRHSLMVGTHREDGVALRGSHSLLPNQVPVP 475
Query: 318 -----TTSSTDLNHKTQENYRG---GLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMK 369
+ +S DLN Q+ YRG GLQ QS + ++EIK+++ E DENL + SS+D K
Sbjct: 476 QLPVQSATSPDLN-PPQDPYRGMPPGLQGQSVSSGSSEIKSDD-EGDENLQDTKSSEDKK 533
Query: 370 SDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINEAFKE 429
DD+ +KDIK +S N+DEDL PEQK EREKERRMANNARERLRVRDINEAFKE
Sbjct: 534 LDDD--KKDIK-----SITSNNDDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKE 586
Query: 430 LGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSAVSA 489
LGRM QLHLKS+KPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVS S
Sbjct: 587 LGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVS--SE 644
Query: 490 EPPTTLPGTHPGLSETTNPMGHM 512
PP +L G HPG+ + +N MG M
Sbjct: 645 PPPLSLAGPHPGMGDASNHMGQM 667
>gi|27777636 transcription factor 3 isoform E12 [Homo sapiens]
Length = 654
Score = 437 bits (1124), Expect = e-122
Identities = 261/508 (51%), Positives = 330/508 (64%), Gaps = 54/508 (10%)
Query: 23 TVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGT-HNSSDLWSSSNGMSQPGFGG 81
+VY PS + +D+ R++ +YPS K P+S + + F++ DG+ H S++LWS Q GFG
Sbjct: 183 SVYPPS-SGEDYGRDATAYPSAKTPSSTYPAPFYVADGSLHPSAELWSPPG---QAGFGP 238
Query: 82 ILGTSTSHM------------SQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHR 129
+LG +S + SS++G LH H+R+ Y H ++N LP SSF
Sbjct: 239 MLGGGSSPLPLPPGSGPVGSSGSSSTFGGLHQHERMGYQLHGA---EVNGGLPSASSFSS 295
Query: 130 GSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSN 189
++ V+ SHTPP++G+DS+LG+RG AGSS GDALGKALASIYSPDH+S++F S+
Sbjct: 296 APGATYGGVS-SHTPPVSGADSLLGSRGTTAGSS--GDALGKALASIYSPDHSSNNFSSS 352
Query: 190 PSTPVGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAV 249
PSTPVGSP L GTSQWPR G SPSY+ LH LQS++ED LD +AIHVLR+HAV
Sbjct: 353 PSTPVGSPQGLAGTSQWPRAGAPGALSPSYDGGLHGLQSKIEDHLD---EAIHVLRSHAV 409
Query: 250 GPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHRED----SVS 305
G + D+H+LL P H G+L S + G + + + G+H ED S S
Sbjct: 410 GTA-------GDMHTLL-PGH----GALASGFTGPMSLGGRHAGLVGGSHPEDGLAGSTS 457
Query: 306 LNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSS 365
L NH+ L S T DL+ + ++Y GL T +EIK E KE +EN S
Sbjct: 458 LMHNHAALPSQPGTLP-DLS-RPPDSY-SGLGRAGATAAASEIKREEKEDEENTSAADHS 514
Query: 366 DDMKSDDESSQKDIKVSSRGRTSSTNEDEDL-NPEQKIEREKERRMANNARERLRVRDIN 424
++ K K++K + R RTS +++DL PEQK EREKERR+ANNARERLRVRDIN
Sbjct: 515 EEEK-------KELK-APRARTSPDEDEDDLLPPEQKAEREKERRVANNARERLRVRDIN 566
Query: 425 EAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKV 484
EAFKELGRMCQLHL SEKPQTKLLILHQAV+VIL+LEQQVRERNLNPKAACLKRREEEKV
Sbjct: 567 EAFKELGRMCQLHLNSEKPQTKLLILHQAVSVILNLEQQVRERNLNPKAACLKRREEEKV 626
Query: 485 SAVSAEPPTTLPGTHPGLSETTNPMGHM 512
S V +P L HPGLSE NP GHM
Sbjct: 627 SGVVGDPQMVLSAPHPGLSEAHNPAGHM 654
>gi|209915594 transcription factor 3 isoform E47 [Homo sapiens]
Length = 651
Score = 421 bits (1083), Expect = e-118
Identities = 255/507 (50%), Positives = 326/507 (64%), Gaps = 55/507 (10%)
Query: 23 TVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGT-HNSSDLWSSSNGMSQPGFGG 81
+VY PS + +D+ R++ +YPS K P+S + + F++ DG+ H S++LWS Q GFG
Sbjct: 183 SVYPPS-SGEDYGRDATAYPSAKTPSSTYPAPFYVADGSLHPSAELWSPPG---QAGFGP 238
Query: 82 ILGTSTSHM------------SQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHR 129
+LG +S + SS++G LH H+R+ Y H ++N LP SSF
Sbjct: 239 MLGGGSSPLPLPPGSGPVGSSGSSSTFGGLHQHERMGYQLHGA---EVNGGLPSASSFSS 295
Query: 130 GSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSN 189
++ V+ SHTPP++G+DS+LG+RG AGSS GDALGKALASIYSPDH+S++F S+
Sbjct: 296 APGATYGGVS-SHTPPVSGADSLLGSRGTTAGSS--GDALGKALASIYSPDHSSNNFSSS 352
Query: 190 PSTPVGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAV 249
PSTPVGSP L GTSQWPR G SPSY+ LH LQS++ED LD +AIHVLR+HAV
Sbjct: 353 PSTPVGSPQGLAGTSQWPRAGAPGALSPSYDGGLHGLQSKIEDHLD---EAIHVLRSHAV 409
Query: 250 GPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHRED----SVS 305
G + D+H+LL P H G+L S + G + + + G+H ED S S
Sbjct: 410 GTA-------GDMHTLL-PGH----GALASGFTGPMSLGGRHAGLVGGSHPEDGLAGSTS 457
Query: 306 LNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSS 365
L NH+ L S T DL+ + ++Y GL T +EIK E KE +EN S
Sbjct: 458 LMHNHAALPSQPGTLP-DLS-RPPDSY-SGLGRAGATAAASEIKREEKEDEENTSAADHS 514
Query: 366 DDMKSDDESSQKDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRVRDINE 425
++ K K++K + R RTSST DE L+ E+K R++ERRMANNARER+RVRDINE
Sbjct: 515 EEEK-------KELK-APRARTSST--DEVLSLEEKDLRDRERRMANNARERVRVRDINE 564
Query: 426 AFKELGRMCQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVS 485
AF+ELGRMCQ+HLKS+K QTKLLIL QAV VIL LEQQVRERNLNPKAACLKRREEEKVS
Sbjct: 565 AFRELGRMCQMHLKSDKAQTKLLILQQAVQVILGLEQQVRERNLNPKAACLKRREEEKVS 624
Query: 486 AVSAEPPTTLPGTHPGLSETTNPMGHM 512
V +P L HPGLSE NP GHM
Sbjct: 625 GVVGDPQMVLSAPHPGLSEAHNPAGHM 651
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 57.8 bits (138), Expect = 2e-08
Identities = 93/376 (24%), Positives = 144/376 (38%), Gaps = 23/376 (6%)
Query: 20 NGKTVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGM-SQPG 78
N + + S NS D + S S S S +S + NSSD SS+ S
Sbjct: 720 NSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDS 779
Query: 79 FGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYV 138
+S+ S SS N S S +D ++S SS S+ SS
Sbjct: 780 SNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSS 839
Query: 139 AASHTPPIN-GSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSP 197
+S + + GSDS R +++ SS + D+ + +S S D + S+ SN S S
Sbjct: 840 DSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSD-SSDSSDSNESSNSSD--SSD 896
Query: 198 SPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPA 257
S + S + SS S +S S S D + D + ++ S S +
Sbjct: 897 SSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSS------NSSDSSDSSDS 950
Query: 258 GHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTV 317
+S S S N+ S +SN SS ++S +S + S S + ++S SS
Sbjct: 951 SNSSDSSNSSDSSNSSDSS-DSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDS 1009
Query: 318 TTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQK 377
+ SS N N S +++ + ++ SSD S D S+
Sbjct: 1010 SDSSDSSNSSDSSNSSDSSNS-----------SDSSDSSDSSDSSDSSDSSDSSDSSNSS 1058
Query: 378 DIKVSSRGRTSSTNED 393
D SS SS + D
Sbjct: 1059 DSSDSSDSSDSSDSSD 1074
Score = 57.0 bits (136), Expect = 4e-08
Identities = 87/369 (23%), Positives = 146/369 (39%), Gaps = 17/369 (4%)
Query: 28 SPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTST 87
S NSD + + S S +S + + D + NSSD SS+ + +S
Sbjct: 651 SDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSS-NSSDSSDSSDSSNSSESSDSSDSSD 709
Query: 88 SHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTPPIN 147
S S SS N +S D S S + ++ S S SS +++ + +
Sbjct: 710 SDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSD 769
Query: 148 GSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGTSQWP 207
SDS +++ SS + D+ + +S S D ++SS SN S S S
Sbjct: 770 SSDS-----SDSSDSSNSSDSNDSSNSSD-SSDSSNSSDSSNSSDSSDSSDSSDSDSS-- 821
Query: 208 RPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLG 267
+ SS S ++S S S D D D + N + ++S + SD +
Sbjct: 822 ---NSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSD 878
Query: 268 PSHNAPIG-SLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVT--TSSTDL 324
S ++ S NS+ S +S +S + S S N + S SS + ++S+D
Sbjct: 879 SSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDS 938
Query: 325 NHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVSSR 384
++ + + + S + +++ + D N + SSD S D S D SS
Sbjct: 939 SNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSD--SSDSSNSSDSSDSSDSSDSSD 996
Query: 385 GRTSSTNED 393
SS + D
Sbjct: 997 SSDSSNSSD 1005
Score = 55.5 bits (132), Expect = 1e-07
Identities = 81/385 (21%), Positives = 146/385 (37%), Gaps = 37/385 (9%)
Query: 17 YYYNGKTVYAPSPNS-------DDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWS 69
Y ++ K++ PNS DD N ES + S + D ++NS +
Sbjct: 453 YDFDDKSMQGDDPNSSDESNGNDDANSESDNNSSSRG------------DASYNSDESKD 500
Query: 70 SSNGMSQPGFGGILGTSTSHMSQSSSYGN-LHSHDRLSYPPHSVSPTDINTSLPPMSSFH 128
+ NG G STS + S S GN + +D +D + S
Sbjct: 501 NGNGSDSKGAEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDS-------- 552
Query: 129 RGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPS 188
S+ SS +S + + SDS + +++ S + + + S S D + SS S
Sbjct: 553 -DSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSS 611
Query: 189 NPSTPVGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHA 248
+ S S + +S + + S S +S S S D D D + N +
Sbjct: 612 DSSDSSDSSDSKSDSS---KSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSS-----NSS 663
Query: 249 VGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNG 308
+S + SD S S+++ + + S SS S+ + DS + N
Sbjct: 664 NSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNS 723
Query: 309 NHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDM 368
+ S S++ +S + + + ++ S S + +++ + ++ SS+
Sbjct: 724 SDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSS 783
Query: 369 KSDDESSQKDIKVSSRGRTSSTNED 393
S+D S+ D SS SS + D
Sbjct: 784 DSNDSSNSSDSSDSSNSSDSSNSSD 808
Score = 55.5 bits (132), Expect = 1e-07
Identities = 87/379 (22%), Positives = 146/379 (38%), Gaps = 17/379 (4%)
Query: 28 SPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTST 87
S NS D + S S S + S S + +SSD SSN +S
Sbjct: 908 SSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSD 967
Query: 88 SHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTPPIN 147
S S SS + + S S +D + S S+ S SS +++ + N
Sbjct: 968 SSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDS----SNSSDSSDSSDSSDSSNSSDSSN 1023
Query: 148 GSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGTSQWP 207
SDS N++ SS + D+ + +S S SS+ S+ S+ S + +S
Sbjct: 1024 SSDS-----SNSSDSSDSSDSSDSSDSSDSSDSSDSSN--SSDSSDSSDSSDSSDSSDSS 1076
Query: 208 RPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLG 267
+ SS S ++S S S D D D + + + S S + S S
Sbjct: 1077 DSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSS 1136
Query: 268 PSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTS-----ST 322
S N+ S +S SS + S +S + S S + ++S SS + S S+
Sbjct: 1137 DSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSS 1196
Query: 323 DLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVS 382
D + + + S + +++ + D N SSD S D S+ D S
Sbjct: 1197 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSN-ESSDSSDSSDSSDSSNSSDSSDS 1255
Query: 383 SRGRTSSTNEDEDLNPEQK 401
S S+++ +++ + + K
Sbjct: 1256 SDSSDSTSDSNDESDSQSK 1274
Score = 55.1 bits (131), Expect = 2e-07
Identities = 87/406 (21%), Positives = 152/406 (37%), Gaps = 17/406 (4%)
Query: 21 GKTVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNS----SDLWSSSNGMSQ 76
GK+ + S +SD N S S + +S+ + +S SD SSN
Sbjct: 545 GKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDS 604
Query: 77 PGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSP 136
+S S S S + S S +D N+S +S S++SS
Sbjct: 605 SDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSN 664
Query: 137 YVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGS 196
+S + + S S N++ SS + D+ + +S S S S S+ S+ S
Sbjct: 665 SSDSSDSSDSSDSSS-SSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNS 723
Query: 197 PSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLP 256
+ S + SS S ++S S S D D D + N + +S
Sbjct: 724 SDSDSSNS-----SDSSDSSNSSDSSDSSDSSNSSDSSDSSDSS-----NSSDSSDSSDS 773
Query: 257 AGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSST 316
+ SD S N S +S+ +S +S+ S S + DS S N + S SS
Sbjct: 774 SDSSD--SSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSD 831
Query: 317 VTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQ 376
+ SS + + G S S + +++ + ++ + SSD S++ S+
Sbjct: 832 SSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNS 891
Query: 377 KDIKVSSRGRTSSTNEDEDLNPEQKIEREKERRMANNARERLRVRD 422
D SS S +++ + + + ++N+ + D
Sbjct: 892 SDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSD 937
Score = 53.5 bits (127), Expect = 4e-07
Identities = 85/368 (23%), Positives = 144/368 (39%), Gaps = 16/368 (4%)
Query: 28 SPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGM-SQPGFGGILGTS 86
S NS D + S S +S + + + +SSD SSN S ++
Sbjct: 835 SSNSSDSSDSSDSSDGSDSDSSNRSDS----SNSSDSSDSSDSSNSSDSSDSSDSNESSN 890
Query: 87 TSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGST-SSSPYVAASHTPP 145
+S S SS+ + S D + S S ++S SS + S+ SS+ ++ +
Sbjct: 891 SSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDS 950
Query: 146 INGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGTSQ 205
N SDS N++ SS + D+ + ++S S S+ S+ S + +S
Sbjct: 951 SNSSDS-----SNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSD 1005
Query: 206 WPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSL 265
+ SS S ++S S S D D D + + + S S + +S S
Sbjct: 1006 SSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSD---SSDSSDSSDSSDSSNSSDSSD 1062
Query: 266 LGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSSTDLN 325
S ++ S +S+ SS + S +S + S S + + S SS + SS N
Sbjct: 1063 SSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSN 1122
Query: 326 HKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVSSRG 385
+ ++ S S + +++ E ++ SSD S D S D SS
Sbjct: 1123 --SSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNS 1180
Query: 386 RTSSTNED 393
SS + D
Sbjct: 1181 SDSSDSSD 1188
Score = 51.6 bits (122), Expect = 2e-06
Identities = 83/370 (22%), Positives = 143/370 (38%), Gaps = 9/370 (2%)
Query: 30 NSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSH 89
+SD + +S S S +S +++ D + +SSD SS+ + +S
Sbjct: 577 SSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSS-DSSDSSDSSDSSDSKSDSSKSESDSSD 635
Query: 90 MSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAAS----HTPP 145
S + +S D S S N+S SS S+SSS +S +
Sbjct: 636 SDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDS 695
Query: 146 INGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGS--PSPLTGT 203
N S+S + + + SS + D+ + S + + SS SN S S S + +
Sbjct: 696 SNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDS 755
Query: 204 SQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIH 263
S + SS S ++S S S D D + + +++ S S + S
Sbjct: 756 SDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDS 815
Query: 264 SLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSSTD 323
S S+++ S NS+ S +S S S + DS S N + S SS + SS
Sbjct: 816 SDSDSSNSS--DSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDS 873
Query: 324 LNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVSS 383
N + +S + + + + + + ++ + SSD S D S + +S
Sbjct: 874 SNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNS 933
Query: 384 RGRTSSTNED 393
SS + D
Sbjct: 934 NSSDSSNSSD 943
Score = 49.7 bits (117), Expect = 6e-06
Identities = 81/370 (21%), Positives = 137/370 (37%), Gaps = 13/370 (3%)
Query: 30 NSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSH 89
NS D + S S S S +S + +SSD SS + S + +S
Sbjct: 934 NSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSD 993
Query: 90 MSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTPPINGS 149
S SS N S S + +D + S S S SS ++ + + S
Sbjct: 994 SSDSSDSSNSSDSSDSSDSSDSSNSSDSSNS----SDSSNSSDSSDSSDSSDSSDSSDSS 1049
Query: 150 DSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGTSQWPRP 209
DS N++ SS + D+ + +S S SS S+ S+ + S + +S
Sbjct: 1050 DS--SDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSE--SSDSSDSSNSSDSSDSSDSSDS 1105
Query: 210 GGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPS 269
+ SS S ++S S S D D D + + + S S + S S S
Sbjct: 1106 SDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDS 1165
Query: 270 HNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQ 329
++ S +S+ SS + S +S + S S + + S SS + SS +
Sbjct: 1166 SDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDS 1225
Query: 330 ENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVSSRGRTSS 389
+ S S + +++ + + SSD S +S+ + S G ++
Sbjct: 1226 SD-----SSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSKSGNGNN 1280
Query: 390 TNEDEDLNPE 399
D D + E
Sbjct: 1281 NGSDSDSDSE 1290
Score = 47.0 bits (110), Expect = 4e-05
Identities = 72/310 (23%), Positives = 117/310 (37%), Gaps = 8/310 (2%)
Query: 28 SPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTST 87
S +S D + S S S S +S + NSSD SS+ +S
Sbjct: 994 SSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSD 1053
Query: 88 SHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTPPIN 147
S S SS + S S S + ++ S+ S SS ++ + +
Sbjct: 1054 SSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSD 1113
Query: 148 GSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSS----SFPSNPSTPVGSPSPLTGT 203
SDS N++ SS + D+ + +S S SS S S+ S+ S + +
Sbjct: 1114 SSDS--SDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDS 1171
Query: 204 SQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIH 263
S + SS S ++S S S D D D + + + S S + S
Sbjct: 1172 SDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDS 1231
Query: 264 SLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSL--NGNHSVLSSTVTTSS 321
+ S ++ S +SN SS + S ++ DS S NGN++ S +
Sbjct: 1232 NESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSKSGNGNNNGSDSDSDSEG 1291
Query: 322 TDLNHKTQEN 331
+D NH T ++
Sbjct: 1292 SDSNHSTSDD 1301
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 54.3 bits (129), Expect = 3e-07
Identities = 75/346 (21%), Positives = 136/346 (39%), Gaps = 54/346 (15%)
Query: 46 PPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLHSHDRL 105
PPT++ A+ TH + + +++G SQ L T+ + S S + H +
Sbjct: 1655 PPTTLKAT-----GSTHTAPTMTLTTSGTSQALSS--LNTAKTSTSLHSHTSSTHHAEAT 1707
Query: 106 SYPPHSVSPTDINTSLPPM-----------SSFHRGSTSSS--PYVAASHTPPINGSDSI 152
S +++P +T PPM SSF TS+S + +++H P + + +
Sbjct: 1708 STSTTNITPNPTSTGTPPMTVTTSGTSQSRSSFSTAKTSTSLHSHTSSTHHPEVTSTSTT 1767
Query: 153 LGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGTS-----QWP 207
T + + ++T A + S P ++ P +TP+ S P+T TS +P
Sbjct: 1768 SITPNHTSTGTRTPVAHTTSATSSRLPTPFTTHSPPTGTTPISSTGPVTATSFQTTTTYP 1827
Query: 208 RPGGQAPS----SPSYENSL-----HSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAG 258
P + PS+ SL H++ ++ +IH + + P T++ A
Sbjct: 1828 TPSHPHTTLPTHVPSFSTSLVTPSTHTVIIPTHTQM-ATSASIHSMPTGTIPPPTTIKA- 1885
Query: 259 HSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVT 318
G +H AP + G+S SS S + T S + +H ++ T T
Sbjct: 1886 -------TGSTHTAP--PMTPTTSGTSQSPSSFSTAKTSTSLPYHTS-STHHPEVTPTST 1935
Query: 319 TSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPS 364
T+ T + T +++ TT + H PP+
Sbjct: 1936 TNITPKHTST--------GTRTPVAHTTSASSSRLPTPFTTHSPPT 1973
Score = 51.6 bits (122), Expect = 2e-06
Identities = 70/329 (21%), Positives = 130/329 (39%), Gaps = 46/329 (13%)
Query: 28 SPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTST 87
+P + P+ SP P T +T F T+ + ++ P F L T +
Sbjct: 1399 TPQTPHTTHSPPTAGSPVPSTGPVTATSFHATTTYPTPSHPETTLPTHVPPFSTSLVTPS 1458
Query: 88 SHM------SQSSSYGNLHSHDRLSYPPHS-------------VSPTDINTSLPPMS-SF 127
+H +Q ++ + HS + PP + ++PT TS S S
Sbjct: 1459 THTVITPTHAQMATSASNHSAPTGTIPPPTTLKATGSTHTAPPITPTTSGTSQAHSSFST 1518
Query: 128 HRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFP 187
++ TS + +++H P + + + T + ++T A + S P ++ P
Sbjct: 1519 NKTPTSLHSHTSSTHHPEVTPTSTTTITPNPTSTRTRTPVAHTNSATSSRPPPPFTTHSP 1578
Query: 188 SNPSTPVGSPSPLTGTS-----QWPRPGGQAPSSPSY---------ENSLHSLQSRMEDR 233
S+P S P+T TS +P P + P++ S H++ + +
Sbjct: 1579 PTGSSPFSSTGPMTATSFKTTTTYPTPSHPQTTLPTHVPPFSTSLVTPSTHTVITPTHAQ 1638
Query: 234 LDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSA 293
+ +IH + + P T+L A G +H AP +L ++ G+S SS +
Sbjct: 1639 M-ATSASIHSMPTGTIPPPTTLKA--------TGSTHTAPTMTLTTS--GTSQALSSLNT 1687
Query: 294 SMVGTHREDSVSLNGNHSVLSSTVTTSST 322
+ T S + +H+ +ST TT+ T
Sbjct: 1688 AKTSTSLHSHTS-STHHAEATSTSTTNIT 1715
Score = 44.7 bits (104), Expect = 2e-04
Identities = 71/328 (21%), Positives = 130/328 (39%), Gaps = 50/328 (15%)
Query: 39 PSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHM------SQ 92
P+ +P T +T F T+ + ++ P F L T ++H +Q
Sbjct: 1803 PTGTTPISSTGPVTATSFQTTTTYPTPSHPHTTLPTHVPSFSTSLVTPSTHTVIIPTHTQ 1862
Query: 93 SSSYGNLHSHDRLSYPPHS-------------VSPTDINTSLPPMSSFHRGSTSSS-PY- 137
++ ++HS + PP + ++PT TS P SSF TS+S PY
Sbjct: 1863 MATSASIHSMPTGTIPPPTTIKATGSTHTAPPMTPTTSGTSQSP-SSFSTAKTSTSLPYH 1921
Query: 138 VAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSP 197
+++H P + + + T + + ++T A + +S P ++ P S+P S
Sbjct: 1922 TSSTHHPEVTPTSTTNITPKHTSTGTRTPVAHTTSASSSRLPTPFTTHSPPTGSSPFSST 1981
Query: 198 SPLTGTS-----QWPRPGGQAPSSPSY---------ENSLHSLQSRMEDRLDRLDDAIHV 243
P+T TS +P P + P++ S H++ ++ +IH
Sbjct: 1982 GPMTATSFQTTTTYPTPSHPQTTLPTHVPPFSTSLVTPSTHTVIITTHTQM-ATSASIHS 2040
Query: 244 LRNHAVGPSTSLPAGHSDIHSLLGPSHNAP---IGSLNSNYGGSSLVASSRSASMVGTHR 300
V P T+L A G +H AP + + ++ SS ++ S+S + +
Sbjct: 2041 TPTGTVPPPTTLKA--------TGSTHTAPPMTVTTSGTSQTHSSFSTATASSSFISS-- 2090
Query: 301 EDSVSLNGNHSVLSSTVTTSSTDLNHKT 328
+ N + SS +TT L+ T
Sbjct: 2091 SSWLPQNSSSRPPSSPITTQLPHLSSAT 2118
Score = 43.9 bits (102), Expect = 4e-04
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 41/260 (15%)
Query: 46 PPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLHSHDRL 105
PPT++ A+ TH + + +++G SQ T++S SSS+ +S R
Sbjct: 2048 PPTTLKAT-----GSTHTAPPMTVTTSGTSQTHSSFSTATASSSFISSSSWLPQNSSSRP 2102
Query: 106 SYPPHSVSPTDINTSLPPMSSFHRGSTSSSP----------YVAASHTPPINGSDSILGT 155
P + ++++ P+S+ ++ S+S SP YV +SH+ P S S+
Sbjct: 2103 PSSPITTQLPHLSSATTPVSTTNQLSSSFSPSPSAPSTVSSYVPSSHSSPQTSSPSV--- 2159
Query: 156 RGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPS 215
G+S + + ++ S H SS ++P+T S SPL PS
Sbjct: 2160 -----GTSSSFVSAPVHSTTLSSGSH--SSLSTHPTTASVSASPL------------FPS 2200
Query: 216 SPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIG 275
SP+ ++ + L A+ + V P+ P+ H ++ PS
Sbjct: 2201 SPAASTTIRATLPHTISSPFTL-SALLPISTVTVSPT---PSSHLASSTIAFPSTPRTTA 2256
Query: 276 SLNSNYGGSSLVASSRSASM 295
S ++ SS +SRS S+
Sbjct: 2257 STHTAPAFSSQSTTSRSTSL 2276
Score = 36.2 bits (82), Expect = 0.073
Identities = 76/328 (23%), Positives = 119/328 (36%), Gaps = 67/328 (20%)
Query: 46 PPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLHSHDRL 105
PPT++ A+ TH + + +++G SQ ST+ S S Y +H
Sbjct: 1879 PPTTIKAT-----GSTHTAPPMTPTTSGTSQSPSS----FSTAKTSTSLPYHTSSTHHPE 1929
Query: 106 SYPPHSVSPTDINTSL---PPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGS 162
P + + T +TS P++ S+S P +H+PP GS T A S
Sbjct: 1930 VTPTSTTNITPKHTSTGTRTPVAHTTSASSSRLPTPFTTHSPP-TGSSPFSSTGPMTATS 1988
Query: 163 SQTGD--------------------------ALGKALASIYSPDHTSSSFPSNPSTPVGS 196
QT + + + ++ TS+S S P+ V
Sbjct: 1989 FQTTTTYPTPSHPQTTLPTHVPPFSTSLVTPSTHTVIITTHTQMATSASIHSTPTGTVPP 2048
Query: 197 PSPL----------------TGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDA 240
P+ L +GTSQ A +S S+ +S L R
Sbjct: 2049 PTTLKATGSTHTAPPMTVTTSGTSQTHSSFSTATASSSFISSSSWLPQNSSSRPP--SSP 2106
Query: 241 IHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHR 300
I H +T + + + S PS +AP S S+Y SS + S+ VGT
Sbjct: 2107 ITTQLPHLSSATTPVSTTNQ-LSSSFSPSPSAP--STVSSYVPSSHSSPQTSSPSVGTSS 2163
Query: 301 E-------DSVSLNGNHSVLSSTVTTSS 321
+ +G+HS LS+ TT+S
Sbjct: 2164 SFVSAPVHSTTLSSGSHSSLSTHPTTAS 2191
>gi|118498337 HECT domain containing 1 [Homo sapiens]
Length = 2610
Score = 47.8 bits (112), Expect = 2e-05
Identities = 92/417 (22%), Positives = 148/417 (35%), Gaps = 83/417 (19%)
Query: 11 GSNSLMYYYNGKTVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSS 70
GSNS GK +P D + SPKP +S + T + WSS
Sbjct: 1318 GSNSYRMGAEGKFDLKLAPGYDP-----DTVASPKPVSSTVSGT----------TQSWSS 1362
Query: 71 SNGMSQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPP------------HS-VSPTDI 117
+ P S+S SSS ++ S +S HS VS D+
Sbjct: 1363 LVKNNCPDKTSAAAGSSSRKGSSSSVCSVASSSDISLGSTKTERRSEIVMEHSIVSGADV 1422
Query: 118 NTSLPPMSSFHR-------GSTSSSPYVAASHTPPIN-----GSDSILGTRGNAAGSSQT 165
+ + +SS S+S+S + T N G DS + T G ++
Sbjct: 1423 HEPIVVLSSAENVPQTEVGSSSSASTSTLTAETGSENAERKLGPDSSVRTPGESS----- 1477
Query: 166 GDALGKALASIYSPDHTSSSFPSNPSTPVGSP-----SPLTGTSQWPRPGGQAPSSPSYE 220
A+ + S+ SPD +S S +N P S S G SS S
Sbjct: 1478 --AISMGIVSVSSPDVSSVSELTNKEAASQRPLSSSASNRLSVSSLLAAGAPMSSSASVP 1535
Query: 221 NSLHSLQSRMEDRLDRL-------------------DDAIHVLRNHAVGPSTSLPAGHSD 261
N S +E + R+ D+ + L + + +TS G
Sbjct: 1536 NLSSRETSSLESFVRRVANIARTNATNNMNLSRSSSDNNTNTLGRNVMSTATSPLMGAQS 1595
Query: 262 IHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSS 321
+L P + + S+ SS VA++ + VG ++++ S T T+S
Sbjct: 1596 FPNLTTPGTTSTVTMSTSSVTSSSNVATATTVLSVGQSLSNTLTT-------SLTSTSSE 1648
Query: 322 TDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKD 378
+D + + + L S + + E+ + DE+L EP DD DD ++
Sbjct: 1649 SDTGQEAEYSLYDFLDSCRASTLLAEL-----DDDEDLPEPDEEDDENEDDNQEDQE 1700
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 47.0 bits (110), Expect = 4e-05
Identities = 72/299 (24%), Positives = 113/299 (37%), Gaps = 40/299 (13%)
Query: 61 THNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPH-----SVSPT 115
T S SSSN P TST S G + ++ PP +
Sbjct: 1017 TEGKSPSHSSSNRPFTPP------TSTGGSKSPGSAGRSQTPPGVATPPIPKITIQIPKG 1070
Query: 116 DINTSLPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALAS 175
+ P S + S S S + SH + S S T G S G + K +S
Sbjct: 1071 TVMVGKPSSHSQYTSSGSVSSSGSKSHHSHSSSSSSSASTSGKMKSSKSEGSSSSKLSSS 1130
Query: 176 IYSPDHTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLD 235
+YS +S S S S+ + GG+ SSP ++ L S S + +
Sbjct: 1131 MYSSQGSSGSSQSKNSS---------------QSGGKPGSSPITKHGLSSGSSSTKMKPQ 1175
Query: 236 RLDDAI--HVLRNHAVGPSTSLPAGHSD-IHSLLGPSHNAPIGS-----LNSNYGGSSLV 287
++ L + PS S P G SD + S + P P S ++S GGS +
Sbjct: 1176 GKPSSLMNPSLSKPNISPSHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMS 1235
Query: 288 ASSRSASM---VGTHREDSVSLN---GNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQS 340
+S S+ M G S+S ++S +S+ + SS+ + + +N G + +S
Sbjct: 1236 GTSSSSGMKSSSGLGSSGSLSQKTPPSSNSCTASSSSFSSSGSSMSSSQNQHGSSKGKS 1294
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 46.6 bits (109), Expect = 5e-05
Identities = 80/360 (22%), Positives = 134/360 (37%), Gaps = 51/360 (14%)
Query: 41 YPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLH 100
Y SP+ P + + G S + S+PG T T+ S++ +
Sbjct: 1695 YSSPRSPDTTLSPASTTSSGVSEES-----TTSHSRPG-----STHTTAFPGSTTMPGVS 1744
Query: 101 SHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAA 160
S+ SP +T+L P S+ ++S P H+ P + ++L A+
Sbjct: 1745 QESTASHS----SPGSTDTTLSPGSTT---ASSLGPESTTFHSSPGSTETTLLPDNTTAS 1797
Query: 161 GSSQTGDALGKALASIYSP---------DHTSSSFPSNPSTPVGSPSPLTGTSQWPRPGG 211
G + + + S ++ S++F S PS+ P+P T TS +
Sbjct: 1798 GLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPSSKDTMPAPPTTTSAFVELST 1857
Query: 212 QAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPS-- 269
+ SPS + H S L R +++ V + +T PA S L+ S
Sbjct: 1858 TSHGSPSSTPTTHF--SASSTTLGRSEESTTVHSSPVATATTPSPA-RSTTSGLVEESTA 1914
Query: 270 -HNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLN--------------GNHSVLS 314
H++P GS + + S AS RS +H + +++ HS
Sbjct: 1915 YHSSP-GSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTTSALVEEPTSYHSSPG 1973
Query: 315 STVTT----SSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKS 370
ST TT SST + Q +GT+V T + E+ P SS M++
Sbjct: 1974 STATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMET 2033
Score = 43.9 bits (102), Expect = 4e-04
Identities = 83/365 (22%), Positives = 146/365 (40%), Gaps = 45/365 (12%)
Query: 27 PSPNSDDFNRESPSYP--SPKPPTSMFASTFFMQDGTHNSSDLWSS--SNGMSQPGFGGI 82
PSP S + E+ + P + KP S ++TF+ + +++ L +S S+G+S+
Sbjct: 610 PSPISSG-SMETTALPGSTTKPGLSEKSTTFYSSPRSPDTTHLPASMTSSGVSEESTTSH 668
Query: 83 LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH 142
++H + + + S HS SP +T+L P S+ ++S P H
Sbjct: 669 SRPGSTHTTAFPGSTTMPGLSQESTASHS-SPGPTDTTLSPGSTT---ASSLGPEYTTFH 724
Query: 143 TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSP---------DHTSSSFPSNPSTP 193
+ P + ++L A+G + + + S ++ S++F S PS+
Sbjct: 725 SRPGSTETTLLPDNTTASGLLEASMPVHSSTRSPHTTLSPAGSTTRQGESTTFHSWPSSK 784
Query: 194 VGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPST 253
P+P T TS + P + SPS + H L H + G +
Sbjct: 785 DTRPAPPTTTSAFVEPSTTSHGSPSSIPTTHISARSTTSGLVEESTTYH----SSPGSTQ 840
Query: 254 SLPAGHSDIHSLLG----PSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGN 309
++ SD S G SH++ +++S A S ++++V E+ S
Sbjct: 841 TMHFPESDTTSGRGEESTTSHSSTTHTISS--------APSTTSALV----EEPTSY--- 885
Query: 310 HSVLSSTVTT----SSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSS 365
HS ST TT SST + Q +GT+V T + E+ P SS
Sbjct: 886 HSSPGSTATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISS 945
Query: 366 DDMKS 370
M++
Sbjct: 946 GSMET 950
Score = 43.9 bits (102), Expect = 4e-04
Identities = 78/360 (21%), Positives = 133/360 (36%), Gaps = 51/360 (14%)
Query: 41 YPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLH 100
Y SP+ P + + G S + S+PG + H + S +
Sbjct: 4335 YSSPRSPDTTLSPASTTSSGVSEES-----TTSHSRPG--------SMHTTAFPSSTTMP 4381
Query: 101 SHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAA 160
+ S HS SP +T+L P S+ ++S P H+ P + ++L A+
Sbjct: 4382 GVSQESTASHS-SPGSTDTTLSPGSTT---ASSLGPESTTFHSSPGSTETTLLPDNTTAS 4437
Query: 161 GSSQTGDALGKALASIYSP---------DHTSSSFPSNPSTPVGSPSPLTGTSQWPRPGG 211
G + + + S ++ S++F S P++ +P+P T TS +
Sbjct: 4438 GLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPNSKDTTPAPPTTTSAFVELST 4497
Query: 212 QAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPS-- 269
+ SPS + H S L R +++ V + +T PA S L+ S
Sbjct: 4498 TSHGSPSSTPTTHF--SASSTTLGRSEESTTVHSSPVATATTPSPA-RSTTSGLVEESTT 4554
Query: 270 -HNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLN--------------GNHSVLS 314
H++P GS + + S S R +H + +++ HS
Sbjct: 4555 YHSSP-GSTQTMHFPESNTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYHSSPG 4613
Query: 315 STVTT----SSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKS 370
ST TT SST + Q +GT+V T + E+ P SS M++
Sbjct: 4614 STATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMET 4673
Score = 43.1 bits (100), Expect = 6e-04
Identities = 79/364 (21%), Positives = 132/364 (36%), Gaps = 59/364 (16%)
Query: 41 YPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQ----PGFGGILGTSTSHMSQSSSY 96
Y SP+ P + + G S S G + PG + G S + SS
Sbjct: 3252 YSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSP 3311
Query: 97 GNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTP---------PIN 147
G+ + + P S + + + P ++FH G S+ + +T P++
Sbjct: 3312 GSTDT----TLSPGSTTASSLG---PESTTFHSGPGSTETTLLPDNTTASGLLEASTPVH 3364
Query: 148 GSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGTSQWP 207
S T + AGS+ + S++F S P++ +P+P T TS +
Sbjct: 3365 SSTGSPHTTLSPAGST--------------TRQGESTTFQSWPNSKDTTPAPPTTTSAFV 3410
Query: 208 RPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLG 267
+ SPS + H S L R +++ V + +T PA S L+
Sbjct: 3411 ELSTTSHGSPSSTPTTHF--SASSTTLGRSEESTTVHSSPVATATTPSPA-RSTTSGLVE 3467
Query: 268 PS---HNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLN--------------GNH 310
S H++P GS + + S S R +H + +++ H
Sbjct: 3468 ESTTYHSSP-GSTQTMHFPESDTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYH 3526
Query: 311 SVLSSTVTT----SSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSD 366
S ST TT SST + Q +GT+V T + E+ P SS
Sbjct: 3527 SSPGSTATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSG 3586
Query: 367 DMKS 370
M++
Sbjct: 3587 SMET 3590
Score = 41.2 bits (95), Expect = 0.002
Identities = 77/353 (21%), Positives = 121/353 (34%), Gaps = 44/353 (12%)
Query: 57 MQDGTHNSSDLWSSSNGM-SQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPT 115
+ GT S L S S PG+ T T+ + +++ L S P HS + +
Sbjct: 350 LSPGTTTPSSLGPESTTFHSSPGY-----TKTTRLPDNTTTSGLLE---ASTPVHSSTGS 401
Query: 116 DINTSLPPMSSFHRGS-TSSSPYVAASHTPPI-NGSDSILGTRGNAAGSSQTGDALGKAL 173
T P S+ H G T+ + ++ T P +G+ S SS +
Sbjct: 402 PHTTLSPSSSTTHEGEPTTFQSWPSSKDTSPAPSGTTSAFVKLSTTYHSSPSSTPTTHFS 461
Query: 174 ASIYSPDHTSSSFP--SNPSTPVGSPSPL-TGTSQWPRPGGQAPSSPSYENSLHSLQSRM 230
AS + H+ S P S+P +P P + TS SP ++H +S
Sbjct: 462 ASSTTLGHSEESTPVHSSPVATATTPPPARSATSGHVEESTAYHRSPGSTQTMHFPESST 521
Query: 231 EDRLDRLDDAIHVLRNHAVG--PSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVA 288
H H PST+ H+ HS L GS+
Sbjct: 522 TSGHSEESATFHGSTTHTKSSTPSTTAALAHTSYHSSL----------------GSTETT 565
Query: 289 SSRSASMVGTHREDSVSLNGNHSVLSSTV----TTSSTDLNHKTQENYRGGLQSQSGTVV 344
R +S + E+S + + + +++TV +T S + T G +
Sbjct: 566 HFRDSSTISGRSEESKASHSSPDAMATTVLPAGSTPSVLVGDSTPSPISSGSMETTALPG 625
Query: 345 TTEIKTENKEKDENLHEPPSSDD-------MKSDDESSQKDIKVSSRGRTSST 390
+T K EK + P S D M S S + S G T +T
Sbjct: 626 ST-TKPGLSEKSTTFYSSPRSPDTTHLPASMTSSGVSEESTTSHSRPGSTHTT 677
Score = 40.8 bits (94), Expect = 0.003
Identities = 81/396 (20%), Positives = 129/396 (32%), Gaps = 58/396 (14%)
Query: 23 TVYAPSPNSDDFNRESPS-YPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGG 81
T SP + + +S + Y SP+ P + + G S S SQPG
Sbjct: 4065 TTLPGSPTTPSLSEKSTTFYTSPRSPDATLSPATTTSSGVSEES-----STSHSQPG--- 4116
Query: 82 ILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAAS 141
T T+ S++ L S+ + ++ SS + ST+
Sbjct: 4117 --STHTTAFPDSTTTSGLSQEPTTSHSSQGSTEATLSPGSTTASSLGQQSTTF------- 4167
Query: 142 HTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSP-- 199
H+ P + ++L D + L +P H+S+ TP S S
Sbjct: 4168 HSSPGDTETTLL-----------PDDTITSGLVEASTPTHSSTGSLHTTLTPASSTSTGL 4216
Query: 200 ---LTGTSQWPRPGGQAPSSPS-------YENSLHSLQ--------SRMEDRLDRLDDAI 241
T WP PS PS + HS S L R +++
Sbjct: 4217 QEESTTFQSWPSSSDTTPSPPSTTAVPVEVSTTYHSRPSSTPTTHFSASSTTLGRSEEST 4276
Query: 242 HVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHRE 301
V + T+L S L+G +PI S G + A S + G +
Sbjct: 4277 TV-HSSPGATGTALFPTRSATSVLVGEPTTSPISS-----GSTETTALPGSTTTAGLSEK 4330
Query: 302 DSVSLNGNHS---VLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDEN 358
+ + S LS TTSS T + R G + +T + ++E +
Sbjct: 4331 STTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSMHTTAFPSSTTMPGVSQESTAS 4390
Query: 359 LHEPPSSDDMKSDDESSQKDIKVSSRGRTSSTNEDE 394
P S+D S ++ + S SS E
Sbjct: 4391 HSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTE 4426
Score = 37.0 bits (84), Expect = 0.043
Identities = 66/303 (21%), Positives = 110/303 (36%), Gaps = 27/303 (8%)
Query: 41 YPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLH 100
Y SP+ P + G S + S+PG + S S +
Sbjct: 284 YSSPRSPDRTLSPARTTSSGVSEKS-----TTSHSRPGPTHTIAFPDSTTMPGVSQESTA 338
Query: 101 SHDRLSYPPHSVSP-TDINTSLPPMSS-FHRGSTSSSPYVAASHTPPINGSDSILGTRGN 158
SH ++SP T +SL P S+ FH SSP + P N + S L
Sbjct: 339 SHSIPGSTDTTLSPGTTTPSSLGPESTTFH-----SSPGYTKTTRLPDNTTTSGLLEAST 393
Query: 159 AAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSPS 218
SS + +S + + ++F S PS+ SP+P TS + + SSPS
Sbjct: 394 PVHSSTGSPHTTLSPSSSTTHEGEPTTFQSWPSSKDTSPAPSGTTSAFVKLSTTYHSSPS 453
Query: 219 YENSLHSLQSRMEDRLDRLDDAIH---VLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIG 275
+ H S +H V P+ S +GH + + H +P
Sbjct: 454 STPTTHFSASSTTLGHSEESTPVHSSPVATATTPPPARSATSGHVEESTAY---HRSP-- 508
Query: 276 SLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGG 335
GS+ +S H E+S + +G+ + S+ +++ L H + + G
Sbjct: 509 -------GSTQTMHFPESSTTSGHSEESATFHGSTTHTKSSTPSTTAALAHTSYHSSLGS 561
Query: 336 LQS 338
++
Sbjct: 562 TET 564
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 45.4 bits (106), Expect = 1e-04
Identities = 57/199 (28%), Positives = 81/199 (40%), Gaps = 25/199 (12%)
Query: 28 SPNSDDFNRESPSY----PSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGIL 83
SP S ++ SPSY PS P + ++ T T S S S + P +
Sbjct: 1651 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP-- 1708
Query: 84 GTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHT 143
TS S+ S SY S SY P S S + + S P S + ++ + + S++
Sbjct: 1709 -TSPSYSPTSPSY----SPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYS 1763
Query: 144 PPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGT 203
P S S T N +S S SP ++ +S +P++P SPS T
Sbjct: 1764 PT---SPSYSPTSPNYTPTSPN--------YSPTSPSYSPTSPSYSPTSPSYSPSSPRYT 1812
Query: 204 SQWPRPGGQAPSSPSYENS 222
Q P PSSPSY S
Sbjct: 1813 PQSPT---YTPSSPSYSPS 1828
Score = 45.1 bits (105), Expect = 2e-04
Identities = 57/211 (27%), Positives = 87/211 (41%), Gaps = 19/211 (9%)
Query: 21 GKTVYAPS--PNSDDFNRESPSY----PSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGM 74
G T +PS P S ++ SPSY P+ P + ++ T T S S S
Sbjct: 1607 GYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1666
Query: 75 SQPGFGGILGTSTSHMSQSSSYGNL---HSHDRLSYPPHSVSPTDINTSLPPMSSFHRGS 131
+ P + TS S+ S SY +S SY P S S + + S P S + +
Sbjct: 1667 TSPSYSP---TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
Query: 132 TSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPS 191
+ S + S++P S S T N + +S + + SP ++ +S P+
Sbjct: 1724 SPSYSPTSPSYSPT---SPSYSPTSPNYSPTSPNYTPTSPSYSPT-SPSYSPTSPNYTPT 1779
Query: 192 TPVGSPSPLTGTSQWPRPGGQAPSSPSYENS 222
+P SP T S P +P+SPSY S
Sbjct: 1780 SPNYSP---TSPSYSPTSPSYSPTSPSYSPS 1807
Score = 43.9 bits (102), Expect = 4e-04
Identities = 61/202 (30%), Positives = 81/202 (40%), Gaps = 24/202 (11%)
Query: 28 SPNSDDFNRESPSY----PSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGIL 83
SP S ++ SPSY PS P + ++ T T S S S + P +
Sbjct: 1665 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP-- 1722
Query: 84 GTSTSHMSQSSSYGNLHSHDRLSYPPHS--VSPTDINTSLPPMSSFHRGSTSSSPYVAAS 141
TS S+ S SY S SY P S SPT N + P S+ S S SP + +
Sbjct: 1723 -TSPSYSPTSPSY----SPTSPSYSPTSPNYSPTSPNYT-PTSPSYSPTSPSYSP-TSPN 1775
Query: 142 HTPPI-NGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPL 200
+TP N S + + S T + + SP +T S PS+P SPS
Sbjct: 1776 YTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPS-----SPRYTPQSPTYTPSSPSYSPS-- 1828
Query: 201 TGTSQWPRPGGQAPSSPSYENS 222
S P P+SPSY S
Sbjct: 1829 -SPSYSPTSPKYTPTSPSYSPS 1849
Score = 41.6 bits (96), Expect = 0.002
Identities = 53/195 (27%), Positives = 76/195 (38%), Gaps = 27/195 (13%)
Query: 28 SPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTST 87
SP S ++ SPSY P S + + Q T+ S S S S P + TS
Sbjct: 1784 SPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS---SPSYSPSSPSYSP---TSP 1837
Query: 88 SHMSQSSSYGNLHSHDRLSYPPHS--VSPTDINTSLPPMSSFHRGSTSSSPYVAA-SHTP 144
+ S SY S Y P S SPT S P + S + SP S T
Sbjct: 1838 KYTPTSPSY----SPSSPEYTPTSPKYSPTSPKYS-PTSPKYSPTSPTYSPTTPKYSPTS 1892
Query: 145 PINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGTS 204
P S + T + S SP ++ +S +P++P SP+ G++
Sbjct: 1893 PTYSPTSPVYTPTSPKYSPT-------------SPTYSPTSPKYSPTSPTYSPTSPKGST 1939
Query: 205 QWPRPGGQAPSSPSY 219
P G +P+SP+Y
Sbjct: 1940 YSPTSPGYSPTSPTY 1954
Score = 38.9 bits (89), Expect = 0.011
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 17/117 (14%)
Query: 113 SPTDINTSLPPMSSFHRGSTSS----SPYVAASHTPPINGSDSILGTRGNAAGSSQTGDA 168
+P+ + P M+ +++G+T + SP V + TP G +A S +G +
Sbjct: 1506 APSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSP-------SAASDASGFS 1558
Query: 169 LGKALASIYSPDHTSSSFPSNP--STPVGSPSPL---TGTSQWPR-PGGQAPSSPSY 219
G + A +P S PS+P +P G+ SP T + PR PGG P SPSY
Sbjct: 1559 PGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSY 1615
Score = 38.5 bits (88), Expect = 0.015
Identities = 49/196 (25%), Positives = 72/196 (36%), Gaps = 39/196 (19%)
Query: 28 SPNSDDFNRESPSY----PSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGIL 83
SP S ++ SPSY PS P + ++ T T S S S + P +
Sbjct: 1693 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYS--- 1749
Query: 84 GTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHT 143
TS ++ S SY S SY P S + T + + P S + ++ S + S++
Sbjct: 1750 PTSPNYTPTSPSY----SPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYS 1805
Query: 144 PPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGT 203
P + SP +T SS +PS+P SP T
Sbjct: 1806 P-------------------------SSPRYTPQSPTYTPSSPSYSPSSPSYSP---TSP 1837
Query: 204 SQWPRPGGQAPSSPSY 219
P +PSSP Y
Sbjct: 1838 KYTPTSPSYSPSSPEY 1853
>gi|239752523 PREDICTED: intestinal mucin-like, partial [Homo
sapiens]
Length = 514
Score = 45.1 bits (105), Expect = 2e-04
Identities = 67/267 (25%), Positives = 105/267 (39%), Gaps = 37/267 (13%)
Query: 84 GTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINT-SLPPMSSFHRGSTSSSPYVAASH 142
GT + S + +L + + + P ++ T+I + S P SS ST S+P S
Sbjct: 155 GTLSMETSLPPTSSSLPTTETATTPTTNLVTTEITSHSTPSFSSSTIHSTVSTPTTVISS 214
Query: 143 TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTG 202
PP +G+ + T SS + D L + + H S + T S T
Sbjct: 215 GPPTSGT---IVTSITVTPSSLSTDI---PLTTPTTITHHSVGSTESLLTATDLTSTFTV 268
Query: 203 TSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDI 262
+S PSSPS +N+ S M S ++P+ +
Sbjct: 269 SSSSAMSTSDIPSSPSIQNTETSSLVSMT--------------------SATIPS----V 304
Query: 263 HSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVG-THREDSVSLNGNHSVLSSTVTTSS 321
+HN SL + + G+ +SS SAS G TH E SL + S L TT+
Sbjct: 305 RPTFTSTHNTLTSSLLTTFPGTYSFSSSMSASSDGTTHTETITSLPASTSTLH---TTAE 361
Query: 322 TDLNHKTQENYRGG--LQSQSGTVVTT 346
+ H T ++ ++S S +V TT
Sbjct: 362 STTAHTTTTSFTTSTTMESPSSSVATT 388
>gi|47716512 mex-3 homolog B [Homo sapiens]
Length = 569
Score = 45.1 bits (105), Expect = 2e-04
Identities = 72/277 (25%), Positives = 107/277 (38%), Gaps = 37/277 (13%)
Query: 80 GGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPT-----------DINTSLPPMS--S 126
G +G H S S G+L S P S++PT D ++SL S S
Sbjct: 245 GTDVGFDLHHGSGGSGPGSLWSK-----PTPSITPTPGRKPFSSYRNDSSSSLGSASTDS 299
Query: 127 FHRGSTSSSPYVA---ASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPD--- 180
+ G TSSS A ++PP N G+ T A G+A S+ SPD
Sbjct: 300 YFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEA--SVPSPDGCP 357
Query: 181 HTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRME------DRL 234
+F P+ P G+P + P G AP S S +S S S
Sbjct: 358 ELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGAS 417
Query: 235 DRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLV----ASS 290
+ + +L + + P TS P +H G + + S+ GG L A+
Sbjct: 418 APSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANG 477
Query: 291 RSASMVGTHREDSVSLNGNHSVLSSTVTTSSTDLNHK 327
A + G D+ S + + S SS+ ++SS+ L K
Sbjct: 478 LGAQLPGLQPSDT-SGSSSSSSSSSSSSSSSSGLRRK 513
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 44.7 bits (104), Expect = 2e-04
Identities = 84/390 (21%), Positives = 146/390 (37%), Gaps = 45/390 (11%)
Query: 23 TVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGI 82
TV P+P++ S + K + F + + T S + ++ + G
Sbjct: 5159 TVGDPAPSTSMPVHGSSETTNIKREPTYFLTPRLRETSTSQESSFPTDTSFLLSKVPTGT 5218
Query: 83 LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVS---PTDINTSLPPMSSFHRGSTSSSPYVA 139
+ +S SSS + HD+ + PP + + P +S+ S+ +T +SP +
Sbjct: 5219 ITEVSSTGVNSSSKISTPDHDKSTVPPDTFTGEIPRVFTSSIKTKSAEMTITTQASPPES 5278
Query: 140 ASH-TPPINGSDSIL--GTRGNAAGS---SQTGDALGKALASIY----SPDHTSSSFPSN 189
ASH T P++ S ++ GT S+ +G ++ P +SS S
Sbjct: 5279 ASHSTLPLDTSTTLSQGGTHSTVTQGFPYSEVTTLMGMGPGNVSWMTTPPVEETSSVSSL 5338
Query: 190 PSTP-VGSPSPLTGTSQWPRPGGQAP--------------------------SSPSYENS 222
S+P + SPSP++ TS P P S P+ +
Sbjct: 5339 MSSPAMTSPSPVSSTSPQSIPSSPLPVTALPTSVLVTTTDVLGTTSPESVTSSPPNLSSI 5398
Query: 223 LHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNA---PIGSLNS 279
H + +D + A+H N AV + +GH S+L S + P+ S S
Sbjct: 5399 THERPATYKDTA-HTEAAMHHSTNTAVTNVGTSGSGHKSQSSVLADSETSKATPLMSTTS 5457
Query: 280 NYGGSSLVASSRSASMVG-THREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQS 338
G +S+ S+ + S E + SL+ S++ TSST + G +
Sbjct: 5458 TLGDTSVSTSTPNISQTNQIQTEPTASLSPRLRESSTSEKTSSTTETNTAFSYVPTGAIT 5517
Query: 339 QSGTVVTTEIKTENKEKDENLHEPPSSDDM 368
Q+ + +T + D P S M
Sbjct: 5518 QASRTEISSSRTSISDLDRPTIAPDISTGM 5547
Score = 37.4 bits (85), Expect = 0.033
Identities = 97/392 (24%), Positives = 145/392 (36%), Gaps = 88/392 (22%)
Query: 39 PSYPSPKPPTSMFASTFFMQDGTHNSSDLWSS--SNGMSQPGFG---GILGTSTSHM--- 90
P+Y P TS ++F ++D ++S SS + + F G+ GTSTS
Sbjct: 6611 PAYSEPPKVTSPMVTSFNIRDTIVSTSMPGSSEITRIEMESTFSLAHGLKGTSTSQDPIV 6670
Query: 91 --------------SQSSSYGNLHSHDRLSYP--PHSVSPTDINTSLPPMSSFHRGSTSS 134
+ +S + S R S P HS DI+T + P G T S
Sbjct: 6671 STEKSAVLHKLTTGATETSRTEVASSRRTSIPGPDHSTESPDISTEVIPSLPISLGITES 6730
Query: 135 SPYVAASHTPPINGSDS------ILGTRGNAAGS----------SQTGDALGK---ALAS 175
S + T P GS S T + AG+ S+ + K L+
Sbjct: 6731 SNMTIITRTGPPLGSTSQGTFTLDTPTTSSRAGTHSMATQEFPHSEMTTVMNKDPEILSW 6790
Query: 176 IYSPDHTSSSF-------PSNPSTPVGS---------PSPLT--------------GTSQ 205
P +SF P+ S PV S PSP+T GTS
Sbjct: 6791 TIPPSIEKTSFSSSLMPSPAMTSPPVSSTLPKTIHTTPSPMTSLLTPSLVMTTDTLGTS- 6849
Query: 206 WPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSL 265
P P +P P+ ++ H + + ED +A+H + A + +GH S+
Sbjct: 6850 -PEPTTSSP--PNLSSTSHEILTTDED--TTAIEAMHPSTSTAATNVETTSSGHGSQSSV 6904
Query: 266 LGPSH----NAPIGSLNSNYGGSSLVASSRSASMVGT--HREDSVSLN-GNHSVLSSTVT 318
L S AP+ + ++ G + V++S S S T RE + SL G S
Sbjct: 6905 LADSEKTKATAPMDTTSTM--GHTTVSTSMSVSSETTKIKRESTYSLTPGLRETSISQNA 6962
Query: 319 TSSTDLNHKTQENYRGGLQSQSGTVVTTEIKT 350
+ STD + E G S T VT+ +T
Sbjct: 6963 SFSTDTSIVLSEVPTGTTAEVSRTEVTSSGRT 6994
Score = 37.4 bits (85), Expect = 0.033
Identities = 94/415 (22%), Positives = 143/415 (34%), Gaps = 86/415 (20%)
Query: 24 VYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGIL 83
V +P P S F P PSP P TS+ S G ++D IL
Sbjct: 7696 VTSPHPVSTTFLAHIP--PSPLPVTSLLTS------GPATTTD---------------IL 7732
Query: 84 GTSTSHMSQSSSYGNLHSHDRLS-----------YPPHSVSPTDINTSLPPMSSFHRGST 132
GTST + SSS + SH+RL+ +P + T++ T+ S
Sbjct: 7733 GTSTEPGTSSSSSLSTTSHERLTTYKDTAHTEAVHPSTNTGGTNVATTSSGYKSQSSVLA 7792
Query: 133 SSSPYVAAS---HTPPINGSDSILGTR------------GNAAGSSQTGDALGKALASIY 177
SSP S T + + + L TR G S G + G ++++
Sbjct: 7793 DSSPMCTTSTMGDTSVLTSTPAFLETRRIQTELASSLTPGLRESSGSEGTSSGTKMSTVL 7852
Query: 178 SPDHTSSSFPSNPSTPVGSPSPLTGTSQ---WPRPGGQAPSSPSYENSLHSLQSRMEDRL 234
S T ++ + P P T R +SP S + L
Sbjct: 7853 SKVPTGATTEISKEDVTSIPGPAQSTISPDISTRTVSWFSTSPVMTESAEITMNTHTSPL 7912
Query: 235 DRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPI---GSLNSNYGGSSLVASSR 291
L + +TSL HS I S + + G + ++ L+ +R
Sbjct: 7913 GATTQGTSTLDTSS---TTSLTMTHSTISQGFSHSQMSTLMRRGPEDVSWMSPPLLEKTR 7969
Query: 292 SA----SMVGTHREDSVSLNGNHSVLSSTVTTSS---------TDLNHKTQE---NYRGG 335
+ S T VS S+ SS + +S TD+ HK+ E N
Sbjct: 7970 PSFSLMSSPATTSPSPVSSTLPESISSSPLPVTSLLTSGLAKTTDMLHKSSEPVTNSPAN 8029
Query: 336 LQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVSSRGRTSST 390
L S S ++ T T + EK PSS+ + D+ SS G S++
Sbjct: 8030 LSSTSVEILATSEVTTDTEKTH-----PSSN-------RTVTDVGTSSSGHESTS 8072
Score = 37.0 bits (84), Expect = 0.043
Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 23/239 (9%)
Query: 82 ILGTSTSHMSQSSSYGNLHSHDRLSYPPHS---VSPTDINTSLPPMSSFHRGSTSSSPYV 138
I+ TST + QS+ + S +++S S V+ ++ S +S GS++SSPY
Sbjct: 1972 IVWTSTGTIEQSTQPLHAVSSEKVSVQTQSTPYVNSVAVSASPTHENSVSSGSSTSSPYS 2031
Query: 139 AASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPS 198
+AS + DS + R A +S D L +L + P + S S+ + V +PS
Sbjct: 2032 SAS----LESLDSTISRRN--AITSWLWD-LTTSLPTTTWPSTSLSEALSSGHSGVSNPS 2084
Query: 199 PLTGTSQWPRPGGQAPSSPSYEN---SLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSL 255
+ T+++P + S+ N H Q+ L+ ++ L VG S S
Sbjct: 2085 --STTTEFPLFSAASTSAAKQRNPETETHGPQNTAASTLNTDASSVTGLSETPVGASIS- 2141
Query: 256 PAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLS 314
S++ + + + + L S S+ S +AS GT ++SL + S++S
Sbjct: 2142 ----SEVPLPMAITSRSDVSGLTSE---STANPSLGTASSAGTKLTRTISLPTSESLVS 2193
Score = 33.1 bits (74), Expect = 0.62
Identities = 67/320 (20%), Positives = 124/320 (38%), Gaps = 37/320 (11%)
Query: 38 SPSYPSPKPPT--------SMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSH 89
S S P+P PT + F+S+ + + SS ++S G + P + GT+T
Sbjct: 890 STSVPTPVFPTMDTWPTRSAQFSSSHLVSELRATSSTSVTNSTGSALPKISHLTGTATMS 949
Query: 90 MSQSSSYGNLHSHDRLSYPPHS--------VSPTDINTSLPPMSSFHRGSTSSSPYVAAS 141
+ ++ + + ++P S + T ++TS +S+ S +SP ++
Sbjct: 950 QTNRDTFNDSAAPQSTTWPETSPRFKTGLPSATTTVSTSATSLSATVMVSKFTSPATSSM 1009
Query: 142 HTPPI-NGSDSILGTR-GNAAGS---SQTGDALGKA------LASIYSPDHTSSSFPSNP 190
I S +IL T N GS + T +GK L + + P T++S ++
Sbjct: 1010 EATSIREPSTTILTTETTNGPGSMAVASTNIPIGKGYITEGRLDTSHLPIGTTASSETSM 1069
Query: 191 STPVG--------SPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSR-MEDRLDRLDDAI 241
+ SPS + PG + ++ + ++ L SR + D A+
Sbjct: 1070 DFTMAKESVSMSVSPSQSMDAAGSSTPGRTSQFVDTFSDDVYHLTSREITIPRDGTSSAL 1129
Query: 242 HVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLN-SNYGGSSLVASSRSASMVGTHR 300
PS + S +L S ++P + S+ + V +S V T R
Sbjct: 1130 TPQMTATHPPSPDPGSARSTWLGILSSSPSSPTPKVTMSSTFSTQRVTTSMIMDTVETSR 1189
Query: 301 EDSVSLNGNHSVLSSTVTTS 320
+ +L S+ S + TS
Sbjct: 1190 WNMPNLPSTTSLTPSNIPTS 1209
Score = 30.0 bits (66), Expect = 5.2
Identities = 76/377 (20%), Positives = 136/377 (36%), Gaps = 51/377 (13%)
Query: 28 SPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSN------------GMS 75
SP + + +R+S S P P ST + + T S+ ++SS +
Sbjct: 6060 SPETKNVDRDSTS---PLTPELKEDSTALVMNSTTESNTVFSSVSLDAATEVSRAEVTYY 6116
Query: 76 QPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSP-TDINTSLPPMSSFHRGS-TS 133
P F ST S + HS+ PP ++S I T P G T
Sbjct: 6117 DPTFMPASAQSTKSPDISPEASSSHSNS----PPLTISTHKTIATQTGPSGVTSLGQLTL 6172
Query: 134 SSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTP 193
+ +A S P + + + + ++ D L S +S + +S P
Sbjct: 6173 DTSTIATSAGTPSARTQDFVDSETTSVMNNDLNDVLK---TSPFSAEEANSLSSQAPLLV 6229
Query: 194 VGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRN------- 246
SPSP+T T Q S S + + M+ L+ + + LRN
Sbjct: 6230 TTSPSPVTSTLQ-EHSTSSLVSVTSVPTPTLAKITDMDTNLEPVTRSPQNLRNTLATSEA 6288
Query: 247 ----HAVGPSTSLPAGH-------SDIHSLLGPS---HNAPIGSLNSNYGGSSLVASS-- 290
H + PS + + ++ + + P + A + ++ G S+V++S
Sbjct: 6289 TTDTHTMHPSINTAVANVGTTSSPNEFYFTVSPDSDPYKATSAVVITSTSGDSIVSTSMP 6348
Query: 291 RSASMVGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSGTVVTTEIKT 350
RS++M E + SL L T T+ + T + + + V TE+ +
Sbjct: 6349 RSSAMKKIESETTFSLIFR---LRETSTSQKIGSSSDTSTVFDKAFTAATTEVSRTELTS 6405
Query: 351 ENKEKDENLHEPPSSDD 367
++ + +P S D
Sbjct: 6406 SSRTSIQGTEKPTMSPD 6422
Score = 29.6 bits (65), Expect = 6.8
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
Query: 180 DHTSSSF-PSNPSTPVGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLD 238
D TSS+ P +T SP P + S W +PSSP+ + ++ S S +
Sbjct: 1123 DGTSSALTPQMTATHPPSPDPGSARSTWLGILSSSPSSPTPKVTMSSTFSTQRVTTSMIM 1182
Query: 239 DAIHVLR-NHAVGPS-TSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRSASMV 296
D + R N PS TSL + +G S P L++ +SL AS +
Sbjct: 1183 DTVETSRWNMPNLPSTTSLTPSNIPTSGAIGKSTLVP---LDTPSPATSLEASEGGLPTL 1239
Query: 297 GTHREDS 303
T+ E +
Sbjct: 1240 STYPEST 1246
Score = 29.6 bits (65), Expect = 6.8
Identities = 47/209 (22%), Positives = 70/209 (33%), Gaps = 32/209 (15%)
Query: 37 ESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSY 96
ES SYP P +S ST T S ++ +G S TS +S ++S
Sbjct: 2990 ESMSYPDPSKASSAMTSTSLASKLTTLFSTGQAARSGSSSSPISLSTEKETSFLSPTAST 3049
Query: 97 GNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTR 156
S L P +I L +S S +S+ ++ P + S +I
Sbjct: 3050 SRKTS---LFLGPSMARQPNILVHL--QTSALTLSPTSTLNMSQEEPPELTSSQTIAEEE 3104
Query: 157 GNAAGSSQ---TGDALGKALASIYSPDHTSSSFPSNPSTPVGSPS--------------- 198
G A + T +L + SP ++ S+P T S S
Sbjct: 3105 GTTAETQTLTFTPSETPTSLLPVSSPTEPTARRKSSPETWASSISVPAKTSLVETTDGTL 3164
Query: 199 ---------PLTGTSQWPRPGGQAPSSPS 218
G S WP P + SSP+
Sbjct: 3165 VTTIKMSSQAAQGNSTWPAPAEETGSSPA 3193
>gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]
Length = 861
Score = 44.3 bits (103), Expect = 3e-04
Identities = 82/365 (22%), Positives = 146/365 (40%), Gaps = 45/365 (12%)
Query: 27 PSPNSDDFNRESPSYP--SPKPPTSMFASTFFMQDGTHNSSDLWS--SSNGMSQPGFGGI 82
PSP S + E+ + P + KP S ++TF+ + +++ L + +S+G+S+
Sbjct: 466 PSPISSG-SMETTALPGSTTKPGLSEKSTTFYSSPRSPDTTHLPARMTSSGVSEESTTSH 524
Query: 83 LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH 142
++H + + + S HS SP +T+L P S+ ++S P H
Sbjct: 525 SRPGSTHTTAFPGSTTMPGLSQESTASHS-SPGPTDTTLSPGSTT---ASSLGPEYTTFH 580
Query: 143 TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSP---------DHTSSSFPSNPSTP 193
+ P + ++L A+G + + + S ++ S++F S PS+
Sbjct: 581 SSPGSTETTLLPDNTTASGLLEASTPVHSSTRSPHTTLSPAGSTTRQGESTTFHSWPSSK 640
Query: 194 VGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPST 253
P+P T TS + P + SPS + H L H + G +
Sbjct: 641 DTRPAPPTTTSAFVEPSTTSHGSPSSIPTTHISARSTTSGLVEESTTYH----SSPGSTQ 696
Query: 254 SLPAGHSDIHSLLG----PSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGN 309
++ SD S G SH++ +++S A S ++++V E+ S
Sbjct: 697 TMHFPESDTTSGRGEESTTSHSSTTHTISS--------APSTTSALV----EEPTSY--- 741
Query: 310 HSVLSSTVTT----SSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSS 365
HS ST TT SST + Q +GT+V T + E+ P SS
Sbjct: 742 HSSPGSTATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTNSVLLGESTTSPISS 801
Query: 366 DDMKS 370
M++
Sbjct: 802 GSMET 806
Score = 41.2 bits (95), Expect = 0.002
Identities = 77/353 (21%), Positives = 121/353 (34%), Gaps = 44/353 (12%)
Query: 57 MQDGTHNSSDLWSSSNGM-SQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPT 115
+ GT S L S S PG+ T T+ + +++ L S P HS + +
Sbjct: 206 LSPGTTTPSSLGPESTTFHSSPGY-----TKTTRLPDNTTTSGLLE---ASTPVHSSTGS 257
Query: 116 DINTSLPPMSSFHRGS-TSSSPYVAASHTPPI-NGSDSILGTRGNAAGSSQTGDALGKAL 173
T P S+ H G T+ + ++ T P +G+ S SS +
Sbjct: 258 PHTTLSPSSSTTHEGEPTTFQSWPSSKDTSPAPSGTTSAFVKLSTTYHSSPSSTPTTHFS 317
Query: 174 ASIYSPDHTSSSFP--SNPSTPVGSPSPL-TGTSQWPRPGGQAPSSPSYENSLHSLQSRM 230
AS + H+ S P S+P +P P + TS SP ++H +S
Sbjct: 318 ASSTTLGHSEESTPVHSSPVATATTPPPARSATSGHVEESTAYHRSPGSTQTMHFPESST 377
Query: 231 EDRLDRLDDAIHVLRNHAVG--PSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVA 288
H H PST+ H+ HS L GS+
Sbjct: 378 TSGHSEESATFHGSTTHTKSSTPSTTAALAHTSYHSSL----------------GSTETT 421
Query: 289 SSRSASMVGTHREDSVSLNGNHSVLSSTV----TTSSTDLNHKTQENYRGGLQSQSGTVV 344
R +S + E+S + + + +++TV +T S + T G +
Sbjct: 422 HFRDSSTISGRSEESKASHSSPDAMATTVLPAGSTPSVLVGDSTPSPISSGSMETTALPG 481
Query: 345 TTEIKTENKEKDENLHEPPSSDD-------MKSDDESSQKDIKVSSRGRTSST 390
+T K EK + P S D M S S + S G T +T
Sbjct: 482 ST-TKPGLSEKSTTFYSSPRSPDTTHLPARMTSSGVSEESTTSHSRPGSTHTT 533
Score = 37.0 bits (84), Expect = 0.043
Identities = 66/303 (21%), Positives = 110/303 (36%), Gaps = 27/303 (8%)
Query: 41 YPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLH 100
Y SP+ P + G S + S+PG + S S +
Sbjct: 140 YSSPRSPDRTLSPARTTSSGVSEKS-----TTSHSRPGPTHTIAFPDSTTMPGVSQESTA 194
Query: 101 SHDRLSYPPHSVSP-TDINTSLPPMSS-FHRGSTSSSPYVAASHTPPINGSDSILGTRGN 158
SH ++SP T +SL P S+ FH SSP + P N + S L
Sbjct: 195 SHSIPGSTDTTLSPGTTTPSSLGPESTTFH-----SSPGYTKTTRLPDNTTTSGLLEAST 249
Query: 159 AAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSPS 218
SS + +S + + ++F S PS+ SP+P TS + + SSPS
Sbjct: 250 PVHSSTGSPHTTLSPSSSTTHEGEPTTFQSWPSSKDTSPAPSGTTSAFVKLSTTYHSSPS 309
Query: 219 YENSLHSLQSRMEDRLDRLDDAIH---VLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIG 275
+ H S +H V P+ S +GH + + H +P
Sbjct: 310 STPTTHFSASSTTLGHSEESTPVHSSPVATATTPPPARSATSGHVEESTAY---HRSP-- 364
Query: 276 SLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGG 335
GS+ +S H E+S + +G+ + S+ +++ L H + + G
Sbjct: 365 -------GSTQTMHFPESSTTSGHSEESATFHGSTTHTKSSTPSTTAALAHTSYHSSLGS 417
Query: 336 LQS 338
++
Sbjct: 418 TET 420
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 43.9 bits (102), Expect = 4e-04
Identities = 83/365 (22%), Positives = 146/365 (40%), Gaps = 45/365 (12%)
Query: 27 PSPNSDDFNRESPSYP--SPKPPTSMFASTFFMQDGTHNSSDLWSS--SNGMSQPGFGGI 82
PSP S + E+ + P + KP S ++TF+ + +++ L +S S+G+S+
Sbjct: 97 PSPISSG-SMETTALPGSTTKPGLSEKSTTFYSSPRSPDTTHLPASMTSSGVSEESTTSH 155
Query: 83 LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH 142
++H + + + S HS SP +T+L P S+ ++S P H
Sbjct: 156 SRPGSTHTTAFPGSTTMPGLSQESTASHS-SPGPTDTTLSPGSTT---ASSLGPEYTTFH 211
Query: 143 TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSP---------DHTSSSFPSNPSTP 193
+ P + ++L A+G + + + S ++ S++F S PS+
Sbjct: 212 SRPGSTETTLLPDNTTASGLLEASMPVHSSTRSPHTTLSPAGSTTRQGESTTFHSWPSSK 271
Query: 194 VGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPST 253
P+P T TS + P + SPS + H L H + G +
Sbjct: 272 DTRPAPPTTTSAFVEPSTTSHGSPSSIPTTHISARSTTSGLVEESTTYH----SSPGSTQ 327
Query: 254 SLPAGHSDIHSLLG----PSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGN 309
++ SD S G SH++ +++S A S ++++V E+ S
Sbjct: 328 TMHFPESDTTSGRGEESTTSHSSTTHTISS--------APSTTSALV----EEPTSY--- 372
Query: 310 HSVLSSTVTT----SSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSS 365
HS ST TT SST + Q +GT+V T + E+ P SS
Sbjct: 373 HSSPGSTATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISS 432
Query: 366 DDMKS 370
M++
Sbjct: 433 GSMET 437
Score = 42.0 bits (97), Expect = 0.001
Identities = 79/359 (22%), Positives = 131/359 (36%), Gaps = 59/359 (16%)
Query: 41 YPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLH 100
Y SP+ P + + G S + S+PG T T+ S++ +
Sbjct: 1182 YSSPRSPDTTLSPASTTSSGVSEES-----TTSHSRPG-----STHTTAFPGSTTMPGVS 1231
Query: 101 SHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAA 160
S+ SP +T+L P S+ ++S P H+ P + ++L A+
Sbjct: 1232 QESTASHS----SPGSTDTTLSPGSTT---ASSLGPESTTFHSSPGSTETTLLPDNTTAS 1284
Query: 161 GSSQTGDALGKALASIYSP---------DHTSSSFPSNPSTPVGSPSPLTGTSQWPRPGG 211
G + + + S ++ S++F S PS+ P+P T TS +
Sbjct: 1285 GLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPSSKDTMPAPPTTTSAFVELST 1344
Query: 212 QAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPS-- 269
+ SPS + H S L R +++ V + +T PA S L+ S
Sbjct: 1345 TSHGSPSSTPTTHF--SASSTTLGRSEESTTVHSSPVATATTPSPA-RSTTSGLVEESTA 1401
Query: 270 -HNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKT 328
H++P GS + + S AS RS E S + +SS +T+S + T
Sbjct: 1402 YHSSP-GSTQTMHFPESSTASGRS-------EESRTSHSSTTHTISSPPSTTSALVEEPT 1453
Query: 329 QENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVSSRGRT 387
S G++ TT H P SS +ES+ + G T
Sbjct: 1454 ------SYHSSPGSIATT-------------HFPESSTTSGRSEESTASHSSPDTNGIT 1493
>gi|38683827 ADAM metallopeptidase with thrombospondin type 1 motif, 7
preproprotein [Homo sapiens]
Length = 1686
Score = 43.5 bits (101), Expect = 5e-04
Identities = 38/140 (27%), Positives = 53/140 (37%), Gaps = 26/140 (18%)
Query: 96 YGNLHSHDRLSYPPHSVSPTDI---NTSLPPMSSFHRGSTSSSPYVAASHTPPINGSDSI 152
Y ++ H+ LSY P D+ PP S ++ SP A PP + +
Sbjct: 1067 YNFINFHEDLSYGPSEEPDLDLAGTGDRTPPPHSHPAAPSTGSPVPATE--PPAAKEEGV 1124
Query: 153 LGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNP--------STPVGSPSPLTGTS 204
LG + SQ G SP S P NP TP+G+P +
Sbjct: 1125 LGPWSPSPWPSQAGR----------SPPPPSEQTPGNPLINFLPEEDTPIGAPDLGLPSL 1174
Query: 205 QWPR---PGGQAPSSPSYEN 221
WPR G Q P++P +N
Sbjct: 1175 SWPRVSTDGLQTPATPESQN 1194
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 43.1 bits (100), Expect = 6e-04
Identities = 79/354 (22%), Positives = 124/354 (35%), Gaps = 49/354 (13%)
Query: 41 YPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQ----PGFGGILGTSTSHMSQSSSY 96
Y SP+ P + + G S S G + PG + G S + SS
Sbjct: 1002 YSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSP 1061
Query: 97 GNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTR 156
G+ + + P S + + + P ++FH G S+ + P N + S L
Sbjct: 1062 GSTDT----TLSPRSTTASSLG---PESTTFHSGPGSTETTLL-----PDNTTASGLLEA 1109
Query: 157 GNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPSS 216
SS + A + S++F S PS+ P+P T TS + + S
Sbjct: 1110 STPVHSSTGSPRTTLSPAGSTTRQGESTTFQSWPSSKDTMPAPPTTTSAFVELSTTSHGS 1169
Query: 217 PSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPS---HNAP 273
PS + H S +H + V P+T+ S L+ S H++P
Sbjct: 1170 PSSIPTTHFSASSTTFGRSEESTTVH---SSPVAPATTPSPARSTTSGLVEESTAYHSSP 1226
Query: 274 IGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYR 333
GS + + S AS RS E S + +SS +T+S + T
Sbjct: 1227 -GSTQTMHFPESSTASGRS-------EESRTSHSSTTHTISSPPSTTSALVEEPT----- 1273
Query: 334 GGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVSSRGRT 387
S G++ TT H P SS +ES+ + G T
Sbjct: 1274 -SYHSSPGSIATT-------------HFPESSTTSGRSEESTASHSSPDTNGIT 1313
Score = 42.7 bits (99), Expect = 8e-04
Identities = 83/365 (22%), Positives = 146/365 (40%), Gaps = 45/365 (12%)
Query: 27 PSPNSDDFNRESPSYP--SPKPPTSMFASTFFMQDGTHNSSDLWSS--SNGMSQPGFGGI 82
PSP S + E+ + P + KP S ++TF+ + +++ L +S S+G+S+
Sbjct: 531 PSPISSG-SMETTALPGSTTKPGLSEKSTTFYSSPRSPDTTHLPASMTSSGVSEESTTSH 589
Query: 83 LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPYVAASH 142
++H + + + S HS SP +T+L P S+ ++S P H
Sbjct: 590 SRPGSTHTTAFPGSTTMPGLSQESTASHS-SPGPTDTTLSPGSTT---ASSLGPEYTTFH 645
Query: 143 TPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSP---------DHTSSSFPSNPSTP 193
+ P + ++L A+G + + + S ++ S++F S PS+
Sbjct: 646 SRPGSTETTLLPDNTTASGLLEASMPVHSSTRSPHTTLSPAGSTTRQGESTTFHSWPSSN 705
Query: 194 VGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPST 253
P+P T TS + P + SPS + H L H + G +
Sbjct: 706 DTRPAPPTTTSAFVEPSTTSHGSPSSIPTTHISARSTTSGLVEESTTYH----SSPGSTQ 761
Query: 254 SLPAGHSDIHSLLG----PSHNAPIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGN 309
++ SD S G SH++ +++S A S ++++V E+ S
Sbjct: 762 TMHFPESDTTSGRGEESTTSHSSTTHTISS--------APSTTSALV----EEPTSY--- 806
Query: 310 HSVLSSTVTT----SSTDLNHKTQENYRGGLQSQSGTVVTTEIKTENKEKDENLHEPPSS 365
HS ST TT SST + Q +GT+V T + E+ P SS
Sbjct: 807 HSSPGSTATTHFPDSSTTSGRSEESIASHSSQDATGTIVLPARSTNSVLLGESTTSPISS 866
Query: 366 DDMKS 370
M++
Sbjct: 867 GSMET 871
Score = 41.2 bits (95), Expect = 0.002
Identities = 77/353 (21%), Positives = 121/353 (34%), Gaps = 44/353 (12%)
Query: 57 MQDGTHNSSDLWSSSNGM-SQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPT 115
+ GT S L S S PG+ T T+ + +++ L S P HS + +
Sbjct: 271 LSPGTTTPSSLGPESTTFHSSPGY-----TKTTRLPDNTTTSGLLE---ASTPVHSSTGS 322
Query: 116 DINTSLPPMSSFHRGS-TSSSPYVAASHTPPI-NGSDSILGTRGNAAGSSQTGDALGKAL 173
T P S+ H G T+ + ++ T P +G+ S SS +
Sbjct: 323 PHTTLSPASSTTHEGEPTTFQSWPSSKDTSPAPSGTTSAFVKLSTTYHSSPSSTPTTHFS 382
Query: 174 ASIYSPDHTSSSFP--SNPSTPVGSPSPL-TGTSQWPRPGGQAPSSPSYENSLHSLQSRM 230
AS + H+ S P S+P +P P + TS SP ++H +S
Sbjct: 383 ASSTTLGHSEESTPVHSSPVATATTPPPARSATSGHVEESTAYHRSPGSTQTMHFPESST 442
Query: 231 EDRLDRLDDAIHVLRNHAVG--PSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVA 288
H H PST+ H+ HS L GS+
Sbjct: 443 TSGHSEESATFHGSTTHTKSSTPSTTAALAHTSYHSSL----------------GSTETT 486
Query: 289 SSRSASMVGTHREDSVSLNGNHSVLSSTV----TTSSTDLNHKTQENYRGGLQSQSGTVV 344
R +S + E+S + + + +++TV +T S + T G +
Sbjct: 487 HFRDSSTISGRSEESKASHSSPDAMATTVLPAGSTPSVLVGDSTPSPISSGSMETTALPG 546
Query: 345 TTEIKTENKEKDENLHEPPSSDD-------MKSDDESSQKDIKVSSRGRTSST 390
+T K EK + P S D M S S + S G T +T
Sbjct: 547 ST-TKPGLSEKSTTFYSSPRSPDTTHLPASMTSSGVSEESTTSHSRPGSTHTT 598
Score = 38.1 bits (87), Expect = 0.019
Identities = 67/303 (22%), Positives = 110/303 (36%), Gaps = 27/303 (8%)
Query: 41 YPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLH 100
Y SP+ P + G S + S+PG + S S +
Sbjct: 205 YSSPRSPDRTLSPARTTSSGVSEKS-----TTSHSRPGPTHTIAFPDSTTMPGVSQESTA 259
Query: 101 SHDRLSYPPHSVSP-TDINTSLPPMSS-FHRGSTSSSPYVAASHTPPINGSDSILGTRGN 158
SH ++SP T +SL P S+ FH SSP + P N + S L
Sbjct: 260 SHSIPGSTDTTLSPGTTTPSSLGPESTTFH-----SSPGYTKTTRLPDNTTTSGLLEAST 314
Query: 159 AAGSSQTGDALGKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSPS 218
SS + AS + + ++F S PS+ SP+P TS + + SSPS
Sbjct: 315 PVHSSTGSPHTTLSPASSTTHEGEPTTFQSWPSSKDTSPAPSGTTSAFVKLSTTYHSSPS 374
Query: 219 YENSLHSLQSRMEDRLDRLDDAIH---VLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIG 275
+ H S +H V P+ S +GH + + H +P
Sbjct: 375 STPTTHFSASSTTLGHSEESTPVHSSPVATATTPPPARSATSGHVEESTAY---HRSP-- 429
Query: 276 SLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGG 335
GS+ +S H E+S + +G+ + S+ +++ L H + + G
Sbjct: 430 -------GSTQTMHFPESSTTSGHSEESATFHGSTTHTKSSTPSTTAALAHTSYHSSLGS 482
Query: 336 LQS 338
++
Sbjct: 483 TET 485
>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
Length = 987
Score = 43.1 bits (100), Expect = 6e-04
Identities = 67/276 (24%), Positives = 108/276 (39%), Gaps = 29/276 (10%)
Query: 70 SSNGMSQPGFG-GILGTSTSHMSQSSSYGNLHSHDRLSYPPHS--VSPTDINTSL----- 121
S++ S+P FG GI S+S +S ++S S L P + S T S+
Sbjct: 562 STDSASKPAFGFGINSVSSSSVSTTTSTATAASQPFLFGAPQASAASFTPAMGSIFQFGK 621
Query: 122 PP-------MSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALA 174
PP +++F + ++ P +S +G S L T A S T +
Sbjct: 622 PPALPTTTTVTTFSQSLPTAVPTATSSSAADFSGFGSTLATSAPATSSQPTLTFSNTSTP 681
Query: 175 SIYSPDHTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPS-SPSYENSLHSLQSRMEDR 233
+ P +S+ P PS P +P P G ++ PG P+ +PS+ +S S
Sbjct: 682 TFNIPFGSSAKSPL-PSYPGANPQPAFGAAEGQPPGAAKPALTPSFGSSFTFGNSAAPAP 740
Query: 234 LDRLDDA----IHVLRNHAVGPSTSLPAGHSDIHSLLG-----PSHNAPIGSLNSNYGGS 284
A I ++ H P+ P HS G + AP S +GGS
Sbjct: 741 ATAPTPAPASTIKIVPAHV--PTPIQPTFGGATHSAFGLKATASAFGAPASS-QPAFGGS 797
Query: 285 SLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTS 320
+ V S +A+ G + +G+ S + + T S
Sbjct: 798 TAVFSFGAATSSGFGATTQTASSGSSSSVFGSTTPS 833
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 43.1 bits (100), Expect = 6e-04
Identities = 44/141 (31%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 74 MSQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPT--DINTSLPPMSSFHRGS 131
M PG GG S S + S+ G + P +PT + TS PM + GS
Sbjct: 321 MMGPGGGG--AASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGS 378
Query: 132 TS--SSPYVAASHTPPINGSDSILGTRGNAAGSSQT--GDALGKALASIY---SPDHTSS 184
SSP ++ PP + S G AAG Q G LGK + + Y SP ++
Sbjct: 379 YPEYSSP---SAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAA 435
Query: 185 SFPSNPSTPVGSPSPLTGTSQ 205
S+P+ G+P P G SQ
Sbjct: 436 QQRSHPAMSPGTPGPTMGRSQ 456
Score = 33.9 bits (76), Expect = 0.36
Identities = 90/431 (20%), Positives = 151/431 (35%), Gaps = 70/431 (16%)
Query: 29 PNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTH-------NSSDLWSSSNGMSQPGFGG 81
PN +D N PS P S S + GT ++S SS S P
Sbjct: 604 PNHEDLNLIQQERPSSLPDLS--GSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSP 661
Query: 82 ILGTSTSHMSQ------SSSYGN-LHSHDRLSYPPHSVSPTDI-NTSLPPMSSFHRGSTS 133
++ H+S S G+ + S+ S P +SP I + +PP + +S
Sbjct: 662 FSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGP---ISPASIPGSQMPPQPPGSQSESS 718
Query: 134 SSPYVAASHTPPINGSDSILGTRGNAA----GSSQTGDAL-------GKALASIYSPDHT 182
S P ++ S P G + GT+ N G QTG ++ G+ A I S +
Sbjct: 719 SHPALSQSPMPQERGF--MAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQS 776
Query: 183 SSS---------------------FPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSPSYEN 221
+SS + PS P P G S + GQ PS P
Sbjct: 777 NSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAV 836
Query: 222 SLHSLQSR-MEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSN 280
L + S M++R G +S+ + GP P+ ++N
Sbjct: 837 PLGRMPSAGMQNR-------------PFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRK 883
Query: 281 YGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQS 340
+ A ++A+ R+ S +++S+ S N + N + S +
Sbjct: 884 -AQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMA 942
Query: 341 GTVVTTEIKTENKEKDENLHEPPSSDDMKSD-DESSQKDIKVSSRGRTSSTNEDEDLNPE 399
+V + + + E +K+D E + S+ +SST E +
Sbjct: 943 PAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKV 1002
Query: 400 QKIEREKERRM 410
++ E ER++
Sbjct: 1003 YELGNEPERKL 1013
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 43.1 bits (100), Expect = 6e-04
Identities = 44/141 (31%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 74 MSQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPT--DINTSLPPMSSFHRGS 131
M PG GG S S + S+ G + P +PT + TS PM + GS
Sbjct: 321 MMGPGGGG--AASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGS 378
Query: 132 TS--SSPYVAASHTPPINGSDSILGTRGNAAGSSQT--GDALGKALASIY---SPDHTSS 184
SSP ++ PP + S G AAG Q G LGK + + Y SP ++
Sbjct: 379 YPEYSSP---SAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAA 435
Query: 185 SFPSNPSTPVGSPSPLTGTSQ 205
S+P+ G+P P G SQ
Sbjct: 436 QQRSHPAMSPGTPGPTMGRSQ 456
Score = 36.6 bits (83), Expect = 0.056
Identities = 49/204 (24%), Positives = 77/204 (37%), Gaps = 26/204 (12%)
Query: 28 SPNSDDFNRESPSYPSPKPPT----SMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGIL 83
+P+S +++ P PT + A+ MQ +++ S GM+Q G
Sbjct: 846 TPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASS 905
Query: 84 GTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSS----PYVA 139
+ M+ SSS N + PP+S++P +N+S + S S P A
Sbjct: 906 SPYSQPMNNSSSLMNTQA------PPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKA 959
Query: 140 ASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDHTS-SSFPSNPSTPVGSPS 198
+S ++ G SQ + S SP S SSF + S + SP
Sbjct: 960 DGKEEGTPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPG 1019
Query: 199 PLTGTSQWPRPGGQAPSSPSYENS 222
WP+ PSSP +S
Sbjct: 1020 -------WPK----TPSSPKSSSS 1032
Score = 32.3 bits (72), Expect = 1.1
Identities = 58/236 (24%), Positives = 84/236 (35%), Gaps = 54/236 (22%)
Query: 29 PNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTH-------NSSDLWSSSNGMSQPGFGG 81
PN +D N PS P S S + GT ++S SS S P
Sbjct: 591 PNHEDLNLIQQERPSSLPDLS--GSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSP 648
Query: 82 ILGTSTSHMSQ------SSSYGN-LHSHDRLSYPPHSVSPTDI-NTSLPPMSSFHRGSTS 133
++ H+S S G+ + S+ S P +SP I + +PP + +S
Sbjct: 649 FSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGP---ISPASIPGSQMPPQPPGSQSESS 705
Query: 134 SSPYVAASHTPPINGSDSILGTRGNAA----GSSQTGDAL-------GKALASIYSPDHT 182
S P ++ S P G + GT+ N G QTG ++ G+ A I S +
Sbjct: 706 SHPALSQSPMPQERGF--MAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQS 763
Query: 183 SSS---------------------FPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSP 217
+SS + PS P P G S + GQ PS P
Sbjct: 764 NSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQP 819
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 43.1 bits (100), Expect = 6e-04
Identities = 44/141 (31%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 74 MSQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPT--DINTSLPPMSSFHRGS 131
M PG GG S S + S+ G + P +PT + TS PM + GS
Sbjct: 321 MMGPGGGG--AASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGS 378
Query: 132 TS--SSPYVAASHTPPINGSDSILGTRGNAAGSSQT--GDALGKALASIY---SPDHTSS 184
SSP ++ PP + S G AAG Q G LGK + + Y SP ++
Sbjct: 379 YPEYSSP---SAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAA 435
Query: 185 SFPSNPSTPVGSPSPLTGTSQ 205
S+P+ G+P P G SQ
Sbjct: 436 QQRSHPAMSPGTPGPTMGRSQ 456
Score = 33.9 bits (76), Expect = 0.36
Identities = 90/431 (20%), Positives = 151/431 (35%), Gaps = 70/431 (16%)
Query: 29 PNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTH-------NSSDLWSSSNGMSQPGFGG 81
PN +D N PS P S S + GT ++S SS S P
Sbjct: 591 PNHEDLNLIQQERPSSLPDLS--GSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSP 648
Query: 82 ILGTSTSHMSQ------SSSYGN-LHSHDRLSYPPHSVSPTDI-NTSLPPMSSFHRGSTS 133
++ H+S S G+ + S+ S P +SP I + +PP + +S
Sbjct: 649 FSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGP---ISPASIPGSQMPPQPPGSQSESS 705
Query: 134 SSPYVAASHTPPINGSDSILGTRGNAA----GSSQTGDAL-------GKALASIYSPDHT 182
S P ++ S P G + GT+ N G QTG ++ G+ A I S +
Sbjct: 706 SHPALSQSPMPQERGF--MAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQS 763
Query: 183 SSS---------------------FPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSPSYEN 221
+SS + PS P P G S + GQ PS P
Sbjct: 764 NSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAV 823
Query: 222 SLHSLQSR-MEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSN 280
L + S M++R G +S+ + GP P+ ++N
Sbjct: 824 PLGRMPSAGMQNR-------------PFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRK 870
Query: 281 YGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQS 340
+ A ++A+ R+ S +++S+ S N + N + S +
Sbjct: 871 -AQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMA 929
Query: 341 GTVVTTEIKTENKEKDENLHEPPSSDDMKSD-DESSQKDIKVSSRGRTSSTNEDEDLNPE 399
+V + + + E +K+D E + S+ +SST E +
Sbjct: 930 PAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKV 989
Query: 400 QKIEREKERRM 410
++ E ER++
Sbjct: 990 YELGNEPERKL 1000
>gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo
sapiens]
Length = 834
Score = 42.7 bits (99), Expect = 8e-04
Identities = 65/272 (23%), Positives = 105/272 (38%), Gaps = 23/272 (8%)
Query: 70 SSNGMSQPGFG-GILGTSTSHMSQSSSYGNLHSHDRLSYPPHS--VSPTDINTSL----- 121
S++ S+P FG GI S+S +S ++S S L P + S T S+
Sbjct: 411 STDSASKPAFGFGINSVSSSSVSTTTSTATAASQPFLFGAPQASAASFTPAMGSIFQFGK 470
Query: 122 PP-------MSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALA 174
PP +++F + ++ P +S +G S L T A S T +
Sbjct: 471 PPALPTTTTVTTFSQSLPTAVPTATSSSAADFSGFGSTLATSAPATSSQPTLTFSNTSTP 530
Query: 175 SIYSPDHTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPS-SPSYENSLHSLQSRMEDR 233
+ P +S+ P PS P +P P G ++ PG P+ +PS+ +S S
Sbjct: 531 TFNIPFGSSAKSPL-PSYPGANPQPAFGAAEGQPPGAAKPALTPSFGSSFTFGNSAAPAA 589
Query: 234 LDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLG-----PSHNAPIGSLNSNYGGSSLVA 288
+ A P+ P HS G + AP S +GGS+ V
Sbjct: 590 APTPAPPSMIKIVPAHVPTPIQPTFGGATHSAFGLKATASAFGAPASS-QPAFGGSTAVF 648
Query: 289 SSRSASMVGTHREDSVSLNGNHSVLSSTVTTS 320
S +A+ G + +G+ S + + T S
Sbjct: 649 SFGAATSSGFGATTQTASSGSSSSVFGSTTPS 680
>gi|67782356 corneodesmosin precursor [Homo sapiens]
Length = 529
Score = 42.7 bits (99), Expect = 8e-04
Identities = 60/212 (28%), Positives = 87/212 (41%), Gaps = 23/212 (10%)
Query: 9 GMGSNSLMYYYNGKTVYAPSPNSDDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLW 68
G G +S Y+G + S +S + S S + S + GT S +
Sbjct: 58 GKGDSSGFSSYSGSSSSGSSISSARSSGGGSSGSSSGSSIAQGGSAGSFKPGTGYSQVSY 117
Query: 69 SSSNGMSQPGFGGI--LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSS 126
SS +G S G G LG+S+SH S S+ S HS S + S SS
Sbjct: 118 SSGSGSSLQGASGSSQLGSSSSHSGSSGSHSG-------SSSSHSSSSSSFQFS---SSS 167
Query: 127 FHRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQT--GDALGKALASIYSPDHTSS 184
F G+ S+ P S+ +N S G ++ SSQT + G++++S P SS
Sbjct: 168 FQVGNGSALPTNDNSYRGILNPSQP-----GQSSSSSQTFGVSSSGQSVSSNQRP--CSS 220
Query: 185 SFPSNPST--PVGSPSPLTGTSQWPRPGGQAP 214
P +P + P+ S S S GGQ P
Sbjct: 221 DIPDSPCSGGPIVSHSGPYIPSSHSVSGGQRP 252
Score = 31.6 bits (70), Expect = 1.8
Identities = 54/258 (20%), Positives = 91/258 (35%), Gaps = 24/258 (9%)
Query: 52 ASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHS 111
+S F G+ +S SS+ G G+S + + S+ + ++SY S
Sbjct: 62 SSGFSSYSGSSSSGSSISSARSSGGGSSGSSSGSSIAQGGSAGSFKPGTGYSQVSYSSGS 121
Query: 112 VSPTD--INTSLPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDAL 169
S +S SS H GS+ S ++SH+ + S + G+
Sbjct: 122 GSSLQGASGSSQLGSSSSHSGSSGSHSGSSSSHSS--SSSSFQFSSSSFQVGNGSALPTN 179
Query: 170 GKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSP-----------S 218
+ I +P S S+ + V S ++Q P P SP
Sbjct: 180 DNSYRGILNPSQPGQSSSSSQTFGVSSSGQSVSSNQRP-CSSDIPDSPCSGGPIVSHSGP 238
Query: 219 YENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLN 278
Y S HS+ + V+ H G + + G + L PI S++
Sbjct: 239 YIPSSHSVSGGQR-------PVVVVVDQHGSG-APGVVQGPPCSNGGLPGKPCPPITSVD 290
Query: 279 SNYGGSSLVASSRSASMV 296
+YGG +V S + +V
Sbjct: 291 KSYGGYEVVGGSSDSYLV 308
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 42.4 bits (98), Expect = 0.001
Identities = 85/356 (23%), Positives = 119/356 (33%), Gaps = 39/356 (10%)
Query: 60 GTHNSSDLWSSSNGMSQPGFGGI--LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDI 117
G + S WSSS G + G G LG S QSS YG S HS +
Sbjct: 1965 GPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSG-----HSSTHGQH 2019
Query: 118 NTSLPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIY 177
++ SS + SS ++SH +GS G +GS Q+ + S
Sbjct: 2020 GSASGQSSSCGQHGASSGQ--SSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQ 2077
Query: 178 SPDHTSSSFPSNPSTPVGSPSPLTG--------------TSQWPRPGGQAPSSPSY-ENS 222
SP + S S+ G P G +S + + G + S Y ++
Sbjct: 2078 SPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHG 2137
Query: 223 LHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYG 282
S QS +R + H G S +GH S G H+ G S G
Sbjct: 2138 SRSGQSSRGERHGSSSGSSSRYGQHGSGSRQS--SGHGRQGS--GSGHSPSRGRHGSGSG 2193
Query: 283 GSSLVASSRSASMVGTHREDSVSLNGNHSVL---------SSTVTTSSTDLNHKTQENYR 333
SS S S + R S +G+ SV SS + + H +
Sbjct: 2194 HSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQH 2253
Query: 334 GGLQSQSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVSSRGRTSS 389
G QS T E + + H SS + S + SRGR S
Sbjct: 2254 GSTSGQSST-FDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSG-QSPSRGRHGS 2307
Score = 38.9 bits (89), Expect = 0.011
Identities = 73/306 (23%), Positives = 102/306 (33%), Gaps = 29/306 (9%)
Query: 60 GTHNSSDLWSSSNGM--SQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDI 117
G H S SSS G S+ G + G S SS+Y S H S
Sbjct: 1259 GQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSG-----HFCSQGQH 1313
Query: 118 NTSLPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGD--ALGKALAS 175
++ S+F + +S+ + H + S G G +G S + G +S
Sbjct: 1314 GSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSPSRGRHGSGSGHSS 1373
Query: 176 IYSPDHTSSSFPSNPSTPVGSPSPLTG------TSQWPRPG------GQAPSSPSYENSL 223
Y H S S S+ S GS S + +S W G G SS ++
Sbjct: 1374 SYG-QHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGS 1432
Query: 224 HSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPS-----HNAPIG--S 276
S QS +R + H G SL G S PS H + G S
Sbjct: 1433 RSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSS 1492
Query: 277 LNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRGGL 336
S YG S +SSR G+ + + S SS + H + G
Sbjct: 1493 SYSPYGSGSGWSSSRGPYESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGST 1552
Query: 337 QSQSGT 342
QS +
Sbjct: 1553 SGQSSS 1558
Score = 38.5 bits (88), Expect = 0.015
Identities = 76/308 (24%), Positives = 108/308 (35%), Gaps = 33/308 (10%)
Query: 60 GTHNSSDLWSSSNGM--SQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDI 117
G H S SSS G S+ G + G S SS+Y S H S
Sbjct: 2199 GQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSG-----HFCSQGQH 2253
Query: 118 NTSLPPMSSFHRGSTSSSPYVAASHTPPINGSD--SILGTRGNAAGSSQTGD--ALGKAL 173
++ S+F + +S+ ++SH +GS S G +G+ +G S + G
Sbjct: 2254 GSTSGQSSTFDQEGSSTGQ--SSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGSGSGH 2311
Query: 174 ASIYSPDHTSSSFPSNPSTPVGSPSPLTG------TSQWPRPG------GQAPSSPSYEN 221
+S Y H S S S+ S GS S + +S W G G SS ++
Sbjct: 2312 SSSYG-QHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQH 2370
Query: 222 SLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPS-----HNAPIG- 275
S QS +R + H G SL G S PS H + G
Sbjct: 2371 GSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQ 2430
Query: 276 -SLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENYRG 334
S S YG S +SSR G+ + + S SS + H + G
Sbjct: 2431 SSSYSPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHG 2490
Query: 335 GLQSQSGT 342
QS +
Sbjct: 2491 STSGQSSS 2498
Score = 38.1 bits (87), Expect = 0.019
Identities = 62/257 (24%), Positives = 89/257 (34%), Gaps = 45/257 (17%)
Query: 60 GTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINT 119
G H S WSSS+G G G QSS +G+ H+ S+ S T +
Sbjct: 1376 GQHGSGSGWSSSSGRHGSGSG-----------QSSGFGH---HESSSW--QSSGCTQHGS 1419
Query: 120 SLPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSP 179
SS+ + + S +GS S G G+ + S G SP
Sbjct: 1420 GSGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSP 1479
Query: 180 D---HTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDR 236
H S S S+ +P GS S W G S S+ + L +SR
Sbjct: 1480 SRGRHGSGSGQSSSYSPYGS------GSGWSSSRGPYESGSSHSSGLGHRESRSG----- 1528
Query: 237 LDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNS--NYGGSSLVASSRSAS 294
++ G S +GHS H H + G +S +G SS +SS
Sbjct: 1529 --------QSSGYGQHGS-SSGHSSTHG----QHGSTSGQSSSCGQHGASSGQSSSHGQH 1575
Query: 295 MVGTHREDSVSLNGNHS 311
G+ + G+ S
Sbjct: 1576 GSGSSQSSGYGRQGSGS 1592
Score = 37.4 bits (85), Expect = 0.033
Identities = 76/302 (25%), Positives = 96/302 (31%), Gaps = 58/302 (19%)
Query: 52 ASTFFMQDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHS 111
AS F G H S+ SSS+G G QSSSYG H+ S H
Sbjct: 834 ASGHFSSQGRHGSTSGQSSSSGQHDSSSG-----------QSSSYG---QHESAS---HH 876
Query: 112 VSPTDINTSLPPMSSFH--RGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDAL 169
S + S S H RGS S G G G+ +G S +
Sbjct: 877 ASGRGRHGSGSGQSPGHGQRGSGS--------------GQSPSYGRHGSGSGRSSSSGRH 922
Query: 170 GKALASIYSPDHTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSR 229
G H SSS S+ T GS G SS ++ S QS
Sbjct: 923 GSGSGQSSGFGHKSSSGQSSGYTQHGS--------------GSGHSSSYEQHGSRSGQSS 968
Query: 230 MEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVAS 289
++ + H G SL GH S G S + G S G SS
Sbjct: 969 RSEQHGSSSGSSSSYGQHGSGSRQSL--GHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGP 1026
Query: 290 SRSASMVGTHREDSVSLNGNHSVL---------SSTVTTSSTDLNHKTQENYRGGLQSQS 340
RS S + R S +G+ S L SS + H + G QS
Sbjct: 1027 YRSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQS 1086
Query: 341 GT 342
+
Sbjct: 1087 SS 1088
Score = 36.6 bits (83), Expect = 0.056
Identities = 61/257 (23%), Positives = 88/257 (34%), Gaps = 45/257 (17%)
Query: 60 GTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINT 119
G H S WSSS+G G G QSS +G+ H+ S+ S T +
Sbjct: 2316 GQHGSGSGWSSSSGRHGSGSG-----------QSSGFGH---HESSSW--QSSGYTQHGS 2359
Query: 120 SLPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSP 179
SS+ + + S +GS S G G+ + S G SP
Sbjct: 2360 GSGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSP 2419
Query: 180 D---HTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDR 236
H S S S+ +P GS S W G S + + L +SR
Sbjct: 2420 SRGRHGSGSGQSSSYSPYGS------GSGWSSSRGPYESGSGHSSGLGHRESRSG----- 2468
Query: 237 LDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNS--NYGGSSLVASSRSAS 294
++ G S +GHS H H + G +S +G SS +SS
Sbjct: 2469 --------QSSGYGQHGS-SSGHSSTHG----QHGSTSGQSSSCGQHGASSGQSSSHGQH 2515
Query: 295 MVGTHREDSVSLNGNHS 311
G+ + G+ S
Sbjct: 2516 GSGSSQSSGYGRQGSGS 2532
Score = 35.4 bits (80), Expect = 0.12
Identities = 61/257 (23%), Positives = 87/257 (33%), Gaps = 45/257 (17%)
Query: 60 GTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINT 119
G H S WSSS+G G G QSS +G+ H+ S+ S T +
Sbjct: 1846 GQHGSGSGWSSSSGRHGSGSG-----------QSSGFGH---HESSSW--QSSGYTQHGS 1889
Query: 120 SLPPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSP 179
SS+ + + S +GS S G G+ + S G SP
Sbjct: 1890 GSGHSSSYEQHGSRSGQSSRGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSP 1949
Query: 180 D---HTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDR 236
H S S S+ P GS S W G S + + L +SR
Sbjct: 1950 SRGRHGSGSGQSSSYGPYGS------GSGWSSSRGPYESGSGHSSGLGHRESRSG----- 1998
Query: 237 LDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNS--NYGGSSLVASSRSAS 294
++ G S +GHS H H + G +S +G SS +SS
Sbjct: 1999 --------QSSGYGQHGS-SSGHSSTHG----QHGSASGQSSSCGQHGASSGQSSSHGQH 2045
Query: 295 MVGTHREDSVSLNGNHS 311
G+ + G+ S
Sbjct: 2046 GSGSSQSSGYGRQGSGS 2062
Score = 33.1 bits (74), Expect = 0.62
Identities = 77/335 (22%), Positives = 118/335 (35%), Gaps = 31/335 (9%)
Query: 26 APSPNS---DDFNRESPSYPSPKPPTSMFASTFFMQDGTHNSSDLWSSSNGMSQPGFGGI 82
+PSP+ + +R+S SY + +S + G+ +SS L + Q G
Sbjct: 540 SPSPSRGRHESGSRQSSSYGPHGYGSGRSSSRGPYESGSGHSSGLGHQESRSGQSSGYGQ 599
Query: 83 LGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPY----- 137
G+S+ H S +G+ S S H + ++ GS+ SS Y
Sbjct: 600 HGSSSGHSSTHGQHGST-SGQSSSCGQHGATSGQSSSH----GQHGSGSSQSSRYGQQGS 654
Query: 138 -VAASHTPPINGSD----SILGTRGNAAGSSQTGDALGKALASIYSPDHTSSSFPSNPST 192
S + +GSD S G G+ +G S + G H S S S+ +
Sbjct: 655 GSGQSPSRGRHGSDFGHSSSYGQHGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSSGYS 714
Query: 193 PVGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPS 252
GS S + +S + + G + S S + H S + + H H S
Sbjct: 715 QHGSGS--SHSSGYRKHGSR--SGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGS 770
Query: 253 TSLPAGHSDIHSLLGPS--HNAPIGSLNSNYGGSS----LVASSRSASMVGTHREDSVSL 306
S GHS G S H++ G S SS + S AS G H S
Sbjct: 771 GS---GHSPSRVRHGSSSGHSSSHGQHGSGTSCSSSCGHYESGSGQASGFGQHESGSGQG 827
Query: 307 NGNHSVLSSTVTTSSTDLNHKTQENYRGGLQSQSG 341
H S ++ + Q + G S SG
Sbjct: 828 YSQHGSASGHFSSQGRHGSTSGQSSSSGQHDSSSG 862
Score = 30.8 bits (68), Expect = 3.1
Identities = 76/327 (23%), Positives = 108/327 (33%), Gaps = 51/327 (15%)
Query: 60 GTHNSSDLWSSSNGMSQPGFG------------------GILGTSTSHMSQSSSYGNLHS 101
G + S WSSS G + G G G G+S+ H S +G+ S
Sbjct: 1025 GPYRSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGST-S 1083
Query: 102 HDRLSYPPHSVSPTDINTSLPPMSSFHRGSTSSSPY---VAASHTPPING-------SDS 151
S H S ++ GS+ SS Y + S P +G
Sbjct: 1084 GQSSSCGQHGASSGQSSSH----GQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSP 1139
Query: 152 ILGTRGNAAGSSQTGDALGKALA-SIYSPDHTSSSFPSNPSTPVGSPS-PLTGTSQWPRP 209
G G+ +G S + G L S H SSS S+ + GS S +G Q
Sbjct: 1140 SYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSR 1199
Query: 210 GGQAPSSPSYENSLHSLQSRMEDRLDRLDDAIHVLRNHAVGPSTS-----LPAGHSDIHS 264
GQ+ + +S S + + H + G S S GHS H
Sbjct: 1200 SGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGLGHSSSHG 1259
Query: 265 L--LGPSHNAPIGSLNSNYGGSSLVASSRSAS---------MVGTHREDSVSLNGNHSVL 313
G ++ G S G SS+ S S G+ S +G+ S
Sbjct: 1260 QHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQ 1319
Query: 314 SSTVTTSSTDLNHKTQENYRGGLQSQS 340
SST + + +RG SQS
Sbjct: 1320 SSTFDQEGSSTGQSSSYGHRGSGSSQS 1346
Score = 30.4 bits (67), Expect = 4.0
Identities = 83/351 (23%), Positives = 119/351 (33%), Gaps = 43/351 (12%)
Query: 58 QDGTHNSSDLWSSSNGMSQPGFGGILGTSTSHMSQSSSYGNLHSHDRLSYPPHSVSPTDI 117
+ G+ +SS L + Q G G+S+ H S +G+ S S H S
Sbjct: 1511 ESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGST-SGQSSSCGQHGASSGQS 1569
Query: 118 NTSLPPMSSFHRGSTSSSPY---VAASHTPPING-------SDSILGTRGNAAGSSQTGD 167
++ GS+ SS Y + S P +G G G+ +G S +
Sbjct: 1570 SSH----GQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSG 1625
Query: 168 ALGKALA-SIYSPDHTSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSPSYENSLHSL 226
G L S H SSS S+ + GS S +S + + G + S S H
Sbjct: 1626 QHGSGLGESSGFGHHESSSGQSSSYSQHGSGS--GHSSGYGQHGSR--SGQSSRGERHGS 1681
Query: 227 QSRMEDRLDRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPS---HNAPIG--SLNSNY 281
SR R + H G S G S PS H + +G S + +
Sbjct: 1682 SSRSSSRYGQ----------HGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQH 1731
Query: 282 GGSSLVASSRSASMVGTHREDSVSLNGNH---SVLSSTVTTSSTDLNHKTQENYRGGLQS 338
G S +SSR R S+ G H S SS + + H + G
Sbjct: 1732 GSGSGRSSSRGPY---ESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSG 1788
Query: 339 QSGTVVTTEIKTENKEKDENLHEPPSSDDMKSDDESSQKDIKVSSRGRTSS 389
QS T E + + H SS + S + SRGR S
Sbjct: 1789 QSST-FDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSG-QSPSRGRHGS 1837
>gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens]
Length = 1424
Score = 42.4 bits (98), Expect = 0.001
Identities = 82/310 (26%), Positives = 121/310 (39%), Gaps = 45/310 (14%)
Query: 69 SSSNGMSQPGFGGILG----TSTSHMSQSSSYGNLHSHDRLSYPPHS---VSPTDINTSL 121
S++ MS +GG T M SSY N + +S PPH ++P N +
Sbjct: 423 STTGQMSGARYGGSSNIASLTPGPGMQSPSSYQNNNYGLNMSSPPHGSPGLAPNQQNIMI 482
Query: 122 PPMSSFHRGSTSSSPYVAASHTPPINGSDSILGTRGNAAGSSQTGDALGKALASIYSPDH 181
P + RGS P +A+ P+ G S + + GN S + +L AL +I
Sbjct: 483 SPRN---RGS----PKIASHQFSPVAGVHSPMASSGNTGNHSFSSSSL-SALQAISEGVG 534
Query: 182 TSSSFPSNPSTPVGSPSPLTGTSQWPRPGGQAPSSP----SYENSLHS--LQSRMEDRL- 234
TS + P SP +Q + Q SP +N + S QS D L
Sbjct: 535 TSLLSTLSSPGPKLDNSPNMNITQPSKVSNQDSKSPLGFYCDQNPVESSMCQSNSRDHLS 594
Query: 235 --DRLDDAIHVLRNHAVGPSTSLPAGHSDIHSLLGPSHNAPIGSLNSNYGGSSLVASSRS 292
+ + ++ N GP S GH + LL S + + G SSL S
Sbjct: 595 DKESKESSVEGAENQR-GPLES--KGHKKLLQLLTCS--------SDDRGHSSLTNSPLD 643
Query: 293 ASMVGTHREDSVSLNGNHSVLSST---VTTSSTDLNHKTQENYR---GGLQSQSGTVVTT 346
+S +E SVS+ V SST V+++S QE +R LQ+ +
Sbjct: 644 SSC----KESSVSVTSPSGVSSSTSGGVSSTSNMHGSLLQEKHRILHKLLQNGNSPAEVA 699
Query: 347 EIKTENKEKD 356
+I E KD
Sbjct: 700 KITAEATGKD 709
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.123 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,004,002
Number of Sequences: 37866
Number of extensions: 1222826
Number of successful extensions: 8145
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 560
Number of HSP's that attempted gapping in prelim test: 6682
Number of HSP's gapped (non-prelim): 1767
length of query: 512
length of database: 18,247,518
effective HSP length: 107
effective length of query: 405
effective length of database: 14,195,856
effective search space: 5749321680
effective search space used: 5749321680
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.