ASTN2 30323

Name: ASTN2	Sequence: fasta or formatted (1288aa)		NCBI GI: 46488915
Description: astrotactin 2 isoform a		Referenced in: Neurons Small RNAs in RNA Processing
Other entries for this name: alt prot [395aa] astrotactin 2 isoform d alt prot [1335aa] astrotactin 2 isoform b alt prot [1339aa] astrotactin 2 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 78 6 C cysteine 3.3 43 1 D aspartate 5.3 68 2 E glutamate 7.0 90 2 F phenylalanine 3.3 42 2 G glycine 7.2 93 2 H histidine 2.4 31 2 I isoleucine 3.8 49 2 K lysine 4.1 53 2 L leucine 11.4 147 6 M methionine 1.9 24 1 N asparagine 2.5 32 2 P proline 6.1 78 4 Q glutamine 4.0 52 3 R arginine 5.5 71 3 S serine 9.3 120 3 T threonine 6.1 78 2 V valine 6.2 80 2 W tryptophan 1.2 16 1 Y tyrosine 3.3 43 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 astrotactin 2 isoform a ASTN2 0.991 astrotactin 2 isoform c ASTN2 0.986 astrotactin 2 isoform b ASTN1 0.475 astrotactin isoform 1 ASTN1 0.452 astrotactin isoform 2 ASTN2 0.293 astrotactin 2 isoform d LOC100291924 0.238 PREDICTED: similar to astrotactin 2 FBN2 0.011 fibrillin 2 precursor SCUBE2 0.009 CEGP1 protein LRP1 0.008 low density lipoprotein-related protein 1 FUSSEL18 0.008 PREDICTED: functional smad suppressing element 18 [... FUSSEL18 0.008 PREDICTED: functional smad suppressing element 18 [... FUSSEL18 0.008 PREDICTED: functional smad suppressing element 18 [... LRP1B 0.008 low density lipoprotein-related protein 1B precursor... SCUBE1 0.008 signal peptide, CUB domain, EGF-like 1 EGF 0.008 epidermal growth factor (beta-urogastrone) ATRN 0.007 attractin isoform 2 ATRN 0.007 attractin isoform 1 MATN2 0.007 matrilin 2 isoform b precursor MATN2 0.007 matrilin 2 isoform a precursor MEGF6 0.007 EGF-like-domain, multiple 3 LOC100127930 0.006 PREDICTED: hypothetical protein STAB2 0.006 stabilin 2 precursor LRP4 0.006 low density lipoprotein receptor-related protein 4 ... LOC100128960 0.006 PREDICTED: similar to paraneoplastic antigen MA2 [H... LOC100128960 0.006 PREDICTED: similar to Putative paraneoplastic antig... FBN1 0.006 fibrillin 1 precursor FBN3 0.006 fibrillin 3 precursor VAX1 0.006 ventral anterior homeobox 1 isoform a SORCS2 0.005 VPS10 domain receptor protein SORCS 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.