Guide to the Human Genome
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Name: MYL3 Sequence: fasta or formatted (195aa) NCBI GI: 4557777
Description:

slow skeletal ventricular myosin alkali light chain 3

Referenced in:

Myosin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         16           2
 C cysteine            1.5          3           1
 D aspartate           5.6         11           2
 E glutamate          12.8         25           2
 F phenylalanine       5.1         10           1
 G glycine             6.2         12           1
 H histidine           1.5          3           1
 I isoleucine          3.6          7           1
 K lysine              9.7         19           2
 L leucine             7.2         14           1
 M methionine          4.6          9           2
 N asparagine          3.1          6           1
 P proline             8.2         16           3
 Q glutamine           3.6          7           1
 R arginine            4.1          8           1
 S serine              2.6          5           2
 T threonine           5.6         11           1
 V valine              5.1         10           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   slow skeletal ventricular myosin alkali light chain 3... 
MYL4                  0.793   atrial/embryonic alkali myosin light chain 
MYL4                  0.793   atrial/embryonic alkali myosin light chain 
MYL1                  0.656   fast skeletal myosin alkali light chain 1 isoform 1f...
MYL6B                 0.589   smooth muscle and non-muscle myosin alkali light chai...
MYL6                  0.554   myosin, light chain 6, alkali, smooth muscle and non...
MYL1                  0.540   fast skeletal myosin alkali light chain 1 isoform 3f...
MYL6                  0.527   myosin, light chain 6, alkali, smooth muscle and non...
CALML3                0.247   calmodulin-like 3 
CALM3                 0.245   calmodulin 3 
CALM2                 0.245   calmodulin 2 
CALM1                 0.245   calmodulin 1 
TNNC1                 0.145   troponin C, slow 
TNNC2                 0.140   fast skeletal muscle troponin C 
CALML4                0.124   calmodulin-like 4 isoform 1 
CABP2                 0.121   calcium binding protein 2 isoform 1 
CABP2                 0.116   calcium binding protein 2 isoform 2 
CETN2                 0.105   caltractin 
CETN1                 0.105   centrin 1 
CETN3                 0.102   centrin 3 
CALML6                0.099   calmodulin-like 6 
CALML5                0.094   calmodulin-like 5 
MYL12B                0.094   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.094   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.094   myosin regulatory light chain MRCL2 isoform A 
MYL12B                0.094   myosin regulatory light chain MRCL2 isoform B [Homo...
MYL12A                0.094   myosin, light chain 12A, regulatory, non-sarcomeric [...
MYL9                  0.089   myosin regulatory light chain 9 isoform a 
LOC391722             0.086   PREDICTED: similar to myosin regulatory light chain...
CABP4                 0.086   calcium binding protein 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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