Guide to the Human Genome
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Name: MYL4 Sequence: fasta or formatted (197aa) NCBI GI: 4557038
Description:

atrial/embryonic alkali myosin light chain

Referenced in:

Myosin

Other entries for this name:
alt mRNA [197aa] atrial/embryonic alkali myosin light chain
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.7         23           2
 C cysteine            1.0          2           1
 D aspartate           4.6          9           1
 E glutamate          11.7         23           2
 F phenylalanine       5.1         10           1
 G glycine             6.6         13           1
 H histidine           1.5          3           1
 I isoleucine          3.6          7           1
 K lysine              8.6         17           2
 L leucine             7.1         14           2
 M methionine          3.6          7           1
 N asparagine          3.6          7           1
 P proline            10.2         20           1
 Q glutamine           3.6          7           1
 R arginine            3.0          6           1
 S serine              2.5          5           1
 T threonine           5.1         10           1
 V valine              5.6         11           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   atrial/embryonic alkali myosin light chain 
MYL4                  1.000   atrial/embryonic alkali myosin light chain 
MYL3                  0.787   slow skeletal ventricular myosin alkali light chain 3...
MYL1                  0.667   fast skeletal myosin alkali light chain 1 isoform 1f...
MYL6B                 0.603   smooth muscle and non-muscle myosin alkali light chai...
MYL6                  0.579   myosin, light chain 6, alkali, smooth muscle and non...
MYL6                  0.555   myosin, light chain 6, alkali, smooth muscle and non...
MYL1                  0.541   fast skeletal myosin alkali light chain 1 isoform 3f...
CALM3                 0.221   calmodulin 3 
CALM2                 0.221   calmodulin 2 
CALM1                 0.221   calmodulin 1 
CALML3                0.221   calmodulin-like 3 
CALML4                0.144   calmodulin-like 4 isoform 1 
TNNC2                 0.131   fast skeletal muscle troponin C 
TNNC1                 0.117   troponin C, slow 
CALML6                0.117   calmodulin-like 6 
CETN1                 0.109   centrin 1 
CETN2                 0.107   caltractin 
MYL12B                0.104   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.104   myosin regulatory light chain MRCL2 isoform A [Homo...
MYL12B                0.104   myosin regulatory light chain MRCL2 isoform A 
MYL12A                0.104   myosin, light chain 12A, regulatory, non-sarcomeric [...
MYL12B                0.101   myosin regulatory light chain MRCL2 isoform B [Homo...
LOC391722             0.099   PREDICTED: similar to myosin regulatory light chain...
MYL9                  0.099   myosin regulatory light chain 9 isoform a 
LOC391722             0.099   PREDICTED: similar to myosin regulatory light chain ...
LOC391722             0.099   PREDICTED: similar to myosin regulatory light chain ...
CABP2                 0.099   calcium binding protein 2 isoform 1 
CETN3                 0.093   centrin 3 
CABP4                 0.093   calcium binding protein 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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