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Search of human proteins with 4507431
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507431 thyrotrophic embryonic factor isoform 1 [Homo
sapiens]
(303 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507431 thyrotrophic embryonic factor isoform 1 [Homo sapiens] 607 e-174
gi|223972670 thyrotrophic embryonic factor isoform 2 [Homo sapiens] 510 e-145
gi|4504421 hepatic leukemia factor [Homo sapiens] 296 1e-80
gi|31542493 D site of albumin promoter (albumin D-box) binding p... 221 5e-58
gi|52630429 nuclear factor, interleukin 3 regulated [Homo sapiens] 64 2e-10
gi|239751641 PREDICTED: hypothetical protein XP_002347943 [Homo ... 63 4e-10
gi|5453563 basic leucine zipper transcription factor, ATF-like [... 47 3e-05
gi|8924246 basic leucine zipper transcription factor, ATF-like 3... 44 2e-04
gi|28872796 CCAAT/enhancer binding protein beta [Homo sapiens] 43 3e-04
gi|4885241 v-fos FBJ murine osteosarcoma viral oncogene homolog ... 43 3e-04
gi|4885245 FOS-like antigen 2 [Homo sapiens] 42 9e-04
gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B is... 41 0.001
gi|4502769 CCAAT/enhancer binding protein gamma [Homo sapiens] 40 0.003
gi|33469974 activating transcription factor 4 [Homo sapiens] 39 0.006
gi|33469976 activating transcription factor 4 [Homo sapiens] 39 0.006
gi|194239643 activating transcription factor 7 isoform 3 [Homo s... 39 0.007
gi|5802980 activating transcription factor 7 isoform 2 [Homo sap... 39 0.007
gi|194239640 activating transcription factor 7 isoform 1 [Homo s... 39 0.007
gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens] 38 0.010
gi|205277421 Jun dimerization protein 2 isoform b [Homo sapiens] 38 0.010
gi|205277419 Jun dimerization protein 2 isoform a [Homo sapiens] 38 0.010
gi|205277417 Jun dimerization protein 2 isoform a [Homo sapiens] 38 0.010
gi|18497306 Jun dimerization protein 2 isoform a [Homo sapiens] 38 0.010
gi|59938776 cAMP responsive element binding protein 5 isoform de... 38 0.013
gi|59938774 cAMP responsive element binding protein 5 isoform be... 38 0.013
gi|59938772 cAMP responsive element binding protein 5 isoform ga... 38 0.013
gi|59938770 cAMP responsive element binding protein 5 isoform al... 38 0.013
gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens] 38 0.013
gi|45238854 basic leucine zipper transcription factor, ATF-like ... 38 0.013
gi|22538422 activating transcription factor 2 [Homo sapiens] 37 0.022
>gi|4507431 thyrotrophic embryonic factor isoform 1 [Homo sapiens]
Length = 303
Score = 607 bits (1565), Expect = e-174
Identities = 303/303 (100%), Positives = 303/303 (100%)
Query: 1 MSDAGGGKKPPVDPQAGPGPGPGRAAGERGLSGSFPLVLKKLMENPPREARLDKEKGKEK 60
MSDAGGGKKPPVDPQAGPGPGPGRAAGERGLSGSFPLVLKKLMENPPREARLDKEKGKEK
Sbjct: 1 MSDAGGGKKPPVDPQAGPGPGPGRAAGERGLSGSFPLVLKKLMENPPREARLDKEKGKEK 60
Query: 61 LEEDEAAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPASPTHLAHN 120
LEEDEAAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPASPTHLAHN
Sbjct: 61 LEEDEAAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPASPTHLAHN 120
Query: 121 LLLPVAELEGKESASSSTASPPSSSTAIFQPSETVSSTESSLEKERETPSPIDPNCVEVD 180
LLLPVAELEGKESASSSTASPPSSSTAIFQPSETVSSTESSLEKERETPSPIDPNCVEVD
Sbjct: 121 LLLPVAELEGKESASSSTASPPSSSTAIFQPSETVSSTESSLEKERETPSPIDPNCVEVD 180
Query: 181 VNFNPDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRR 240
VNFNPDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRR
Sbjct: 181 VNFNPDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRR 240
Query: 241 KKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKY 300
KKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKY
Sbjct: 241 KKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKY 300
Query: 301 GPL 303
GPL
Sbjct: 301 GPL 303
>gi|223972670 thyrotrophic embryonic factor isoform 2 [Homo sapiens]
Length = 273
Score = 510 bits (1313), Expect = e-145
Identities = 260/270 (96%), Positives = 262/270 (97%), Gaps = 2/270 (0%)
Query: 36 PLVLKKLMEN--PPREARLDKEKGKEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGES 93
P VLK L+E+ P E R DKEKGKEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGES
Sbjct: 4 PEVLKSLLEHSLPWPEKRTDKEKGKEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGES 63
Query: 94 FHLEYMDLDEFLLENGIPASPTHLAHNLLLPVAELEGKESASSSTASPPSSSTAIFQPSE 153
FHLEYMDLDEFLLENGIPASPTHLAHNLLLPVAELEGKESASSSTASPPSSSTAIFQPSE
Sbjct: 64 FHLEYMDLDEFLLENGIPASPTHLAHNLLLPVAELEGKESASSSTASPPSSSTAIFQPSE 123
Query: 154 TVSSTESSLEKERETPSPIDPNCVEVDVNFNPDPADLVLSSVPGGELFNPRKHKFAEEDL 213
TVSSTESSLEKERETPSPIDPNCVEVDVNFNPDPADLVLSSVPGGELFNPRKHKFAEEDL
Sbjct: 124 TVSSTESSLEKERETPSPIDPNCVEVDVNFNPDPADLVLSSVPGGELFNPRKHKFAEEDL 183
Query: 214 KPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENT 273
KPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENT
Sbjct: 184 KPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENT 243
Query: 274 ALRTEVAELRKEVGKCKTIVSKYETKYGPL 303
ALRTEVAELRKEVGKCKTIVSKYETKYGPL
Sbjct: 244 ALRTEVAELRKEVGKCKTIVSKYETKYGPL 273
>gi|4504421 hepatic leukemia factor [Homo sapiens]
Length = 295
Score = 296 bits (759), Expect = 1e-80
Identities = 156/278 (56%), Positives = 199/278 (71%), Gaps = 15/278 (5%)
Query: 38 VLKKLMENPPR-----EARLDKEKGKEKLEEDEAAAASTMAVSASLMPPIWDKTIPYDGE 92
VL+ L+ENP + E K+K KEK +DE+ + T+ SA L P +WDKT+PYDG+
Sbjct: 21 VLRSLLENPLKLPLHHEDAFSKDKDKEKKLDDESNSP-TVPQSAFLGPTLWDKTLPYDGD 79
Query: 93 SFHLEYMDLDEFLLENGIPASPTHLAHNLLLPVAELEGKESASSSTASPPSSSTAIFQPS 152
+F LEYMDL+EFL ENGIP SP+ H+ P L+ SA+ S S ++A P
Sbjct: 80 TFQLEYMDLEEFLSENGIPPSPSQHDHSPHPP--GLQPASSAAPSVMDLSSRASAPLHPG 137
Query: 153 ETVSSTESS-------LEKERETPSPIDPNCVEVDVNFNPDPADLVLSSVPGGELFNPRK 205
+ S L R TPSPIDP+ ++V V + PDPADL LSS+PG E+F+PRK
Sbjct: 138 IPSPNCMQSPIRPGQLLPANRNTPSPIDPDTIQVPVGYEPDPADLALSSIPGQEMFDPRK 197
Query: 206 HKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRA 265
KF+EE+LKPQPMIKKA+KVF+PD+ KD+KYW RR+KNN+AAKRSRDARRLKENQI IRA
Sbjct: 198 RKFSEEELKPQPMIKKARKVFIPDDLKDDKYWARRRKNNMAAKRSRDARRLKENQIAIRA 257
Query: 266 AFLEKENTALRTEVAELRKEVGKCKTIVSKYETKYGPL 303
+FLEKEN+ALR EVA+LRKE+GKCK I++KYE ++GPL
Sbjct: 258 SFLEKENSALRQEVADLRKELGKCKNILAKYEARHGPL 295
>gi|31542493 D site of albumin promoter (albumin D-box) binding
protein [Homo sapiens]
Length = 325
Score = 221 bits (564), Expect = 5e-58
Identities = 118/232 (50%), Positives = 157/232 (67%), Gaps = 12/232 (5%)
Query: 78 LMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPASPTHLAHNLLLPVAELEGKES---A 134
L P +W++T+P+ +EY+DLD FLLE+G+P SP P S
Sbjct: 100 LAPLLWERTLPFGD----VEYVDLDAFLLEHGLPPSPPPPGGPSPEPSPARTPAPSPGPG 155
Query: 135 SSSTASPPSSSTAIFQPSETVSSTESSLEK---ERETPSPIDPNCVEVDVNFNPDPADLV 191
S +ASP SS P+ T S R+TPSP+DP+ VEV + F PDPADL
Sbjct: 156 SCGSASPRSSPG--HAPARAALGTASGHRAGLTSRDTPSPVDPDTVEVLMTFEPDPADLA 213
Query: 192 LSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSR 251
LSS+PG E F+PR+H+F+EE+LKPQP++KKA+K+ VP+EQKDEKYW+RR KNN AAKRSR
Sbjct: 214 LSSIPGHETFDPRRHRFSEEELKPQPIMKKARKIQVPEEQKDEKYWSRRYKNNEAAKRSR 273
Query: 252 DARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKYGPL 303
DARRLKENQI++RAAFLEKEN LR EV +R+E+ + ++S+Y+ ++G L
Sbjct: 274 DARRLKENQISVRAAFLEKENALLRQEVVAVRQELSHYRAVLSRYQAQHGAL 325
>gi|52630429 nuclear factor, interleukin 3 regulated [Homo sapiens]
Length = 462
Score = 63.9 bits (154), Expect = 2e-10
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 221 KAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVA 280
+ K+ F+PDE+KD YW +R+KNN AAKRSR+ RRL + + + L +EN L+ E+
Sbjct: 61 RRKREFIPDEKKDAMYWEKRRKNNEAAKRSREKRRLNDLVLENKLIALGEENATLKAELL 120
Query: 281 ELRKEVG 287
L+ + G
Sbjct: 121 SLKLKFG 127
>gi|239751641 PREDICTED: hypothetical protein XP_002347943 [Homo
sapiens]
Length = 369
Score = 62.8 bits (151), Expect = 4e-10
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 217 PMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALR 276
P I++ ++ F+P+E+KD YW +R+KNN AAKRSR+ RRL + I R A L +EN L+
Sbjct: 61 PSIRRQRE-FMPEEKKDTVYWEKRRKNNEAAKRSREKRRLNDAAIEGRLAALMEENALLK 119
Query: 277 TEVAELRKEVG 287
E+ L+ G
Sbjct: 120 GELKALKLRFG 130
>gi|5453563 basic leucine zipper transcription factor, ATF-like
[Homo sapiens]
Length = 125
Score = 46.6 bits (109), Expect = 3e-05
Identities = 22/69 (31%), Positives = 42/69 (60%)
Query: 229 DEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGK 288
D D + RR+KN +AA++SR + K + + + + LEK+N ALR E+ +L +E+
Sbjct: 22 DSSDDVRRVQRREKNRIAAQKSRQRQTQKADTLHLESEDLEKQNAALRKEIKQLTEELKY 81
Query: 289 CKTIVSKYE 297
++++ +E
Sbjct: 82 FTSVLNSHE 90
>gi|8924246 basic leucine zipper transcription factor, ATF-like 3
[Homo sapiens]
Length = 127
Score = 43.9 bits (102), Expect = 2e-04
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 231 QKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCK 290
+ D++ RR+KN VAA+RSR + K +++ LE+ENT LR E+ +L +E+
Sbjct: 33 EDDDRKVRRREKNRVAAQRSRKKQTQKADKLHEEYESLEQENTMLRREIGKLTEELKHLT 92
Query: 291 TIVSKYE 297
+ ++E
Sbjct: 93 EALKEHE 99
>gi|28872796 CCAAT/enhancer binding protein beta [Homo sapiens]
Length = 345
Score = 43.1 bits (100), Expect = 3e-04
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 215 PQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTA 274
P P K+K D+ DE Y RR++NN+A ++SRD +++ + + L EN
Sbjct: 254 PAPSQVKSKAKKTVDKHSDE-YKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENER 312
Query: 275 LRTEVAELRKEVGKCKTI 292
L+ +V +L +E+ + +
Sbjct: 313 LQKKVEQLSRELSTLRNL 330
>gi|4885241 v-fos FBJ murine osteosarcoma viral oncogene homolog
[Homo sapiens]
Length = 380
Score = 43.1 bits (100), Expect = 3e-04
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 219 IKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTE 278
I + KV +++EK RR++N +AA + R+ RR + + LE E +AL+TE
Sbjct: 123 IGRRGKVEQLSPEEEEKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTE 182
Query: 279 VAELRKEVGKCKTIVSKY 296
+A L KE K + I++ +
Sbjct: 183 IANLLKEKEKLEFILAAH 200
>gi|4885245 FOS-like antigen 2 [Homo sapiens]
Length = 326
Score = 41.6 bits (96), Expect = 9e-04
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 231 QKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGK 288
+++EK RR++N +AA + R+ RR ++ LE+E + L+ E+AEL+KE K
Sbjct: 122 EEEEKRRIRRERNKLAAAKCRNRRRELTEKLQAETEELEEEKSGLQKEIAELQKEKEK 179
>gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B
isoform 1 [Homo sapiens]
Length = 338
Score = 41.2 bits (95), Expect = 0.001
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 231 QKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKE 285
+++EK RR++N +AA + R+ RR +++ LE+E L +E+AEL+KE
Sbjct: 153 EEEEKRRVRRERNKLAAAKCRNRRRELTDRLQAETDQLEEEKAELESEIAELQKE 207
>gi|4502769 CCAAT/enhancer binding protein gamma [Homo sapiens]
Length = 150
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 220 KKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEV 279
K++KK D DE Y RR++NN+A K+SR + K R L++EN L ++
Sbjct: 50 KQSKKSSPMDRNSDE-YRQRRERNNMAVKKSRLKSKQKAQDTLQRVNQLKEENERLEAKI 108
Query: 280 AELRKEVGKCKTI 292
L KE+ K +
Sbjct: 109 KLLTKELSVLKDL 121
>gi|33469974 activating transcription factor 4 [Homo sapiens]
Length = 351
Score = 38.9 bits (89), Expect = 0.006
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 17/117 (14%)
Query: 185 PDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNN 244
P P L S+ P + ++P K +K + + KK KK+ ++N
Sbjct: 247 PSPGVLCGSARP--KPYDPPGEKMVAAKVKGEKLDKKLKKM---------------EQNK 289
Query: 245 VAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKYG 301
AA R R +R ++ +T LEK+N AL+ L KE+ K ++ + G
Sbjct: 290 TAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARG 346
>gi|33469976 activating transcription factor 4 [Homo sapiens]
Length = 351
Score = 38.9 bits (89), Expect = 0.006
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 17/117 (14%)
Query: 185 PDPADLVLSSVPGGELFNPRKHKFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNN 244
P P L S+ P + ++P K +K + + KK KK+ ++N
Sbjct: 247 PSPGVLCGSARP--KPYDPPGEKMVAAKVKGEKLDKKLKKM---------------EQNK 289
Query: 245 VAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKYG 301
AA R R +R ++ +T LEK+N AL+ L KE+ K ++ + G
Sbjct: 290 TAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEVRKARG 346
>gi|194239643 activating transcription factor 7 isoform 3 [Homo
sapiens]
Length = 462
Score = 38.5 bits (88), Expect = 0.007
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 229 DEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGK 288
DE DE+ ++N AA R R R+L + + +A L +N L EV LR EV +
Sbjct: 307 DEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNEVAQ 366
Query: 289 CKTIV 293
K ++
Sbjct: 367 LKQLL 371
>gi|5802980 activating transcription factor 7 isoform 2 [Homo
sapiens]
Length = 483
Score = 38.5 bits (88), Expect = 0.007
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 229 DEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGK 288
DE DE+ ++N AA R R R+L + + +A L +N L EV LR EV +
Sbjct: 328 DEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNEVAQ 387
Query: 289 CKTIV 293
K ++
Sbjct: 388 LKQLL 392
>gi|194239640 activating transcription factor 7 isoform 1 [Homo
sapiens]
Length = 494
Score = 38.5 bits (88), Expect = 0.007
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 229 DEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGK 288
DE DE+ ++N AA R R R+L + + +A L +N L EV LR EV +
Sbjct: 339 DEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNEVAQ 398
Query: 289 CKTIV 293
K ++
Sbjct: 399 LKQLL 403
>gi|28872794 CCAAT/enhancer binding protein alpha [Homo sapiens]
Length = 358
Score = 38.1 bits (87), Expect = 0.010
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 221 KAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVA 280
KAKK ++ +Y RR++NN+A ++SRD + + + + L +N LR V
Sbjct: 273 KAKKSV---DKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVE 329
Query: 281 ELRKEVGKCKTI 292
+L +E+ + I
Sbjct: 330 QLSRELDTLRGI 341
>gi|205277421 Jun dimerization protein 2 isoform b [Homo sapiens]
Length = 174
Score = 38.1 bits (87), Expect = 0.010
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 214 KPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENT 273
+PQP+ + ++++E+ RR+KN VAA R R+ ++ + + + LE N
Sbjct: 71 RPQPVKSEL-------DEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNA 123
Query: 274 ALRTEVAELRKE 285
L+T++ EL++E
Sbjct: 124 ELKTQIEELKQE 135
>gi|205277419 Jun dimerization protein 2 isoform a [Homo sapiens]
Length = 163
Score = 38.1 bits (87), Expect = 0.010
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 214 KPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENT 273
+PQP+ + ++++E+ RR+KN VAA R R+ ++ + + + LE N
Sbjct: 60 RPQPVKSEL-------DEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNA 112
Query: 274 ALRTEVAELRKE 285
L+T++ EL++E
Sbjct: 113 ELKTQIEELKQE 124
>gi|205277417 Jun dimerization protein 2 isoform a [Homo sapiens]
Length = 163
Score = 38.1 bits (87), Expect = 0.010
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 214 KPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENT 273
+PQP+ + ++++E+ RR+KN VAA R R+ ++ + + + LE N
Sbjct: 60 RPQPVKSEL-------DEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNA 112
Query: 274 ALRTEVAELRKE 285
L+T++ EL++E
Sbjct: 113 ELKTQIEELKQE 124
>gi|18497306 Jun dimerization protein 2 isoform a [Homo sapiens]
Length = 163
Score = 38.1 bits (87), Expect = 0.010
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 214 KPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENT 273
+PQP+ + ++++E+ RR+KN VAA R R+ ++ + + + LE N
Sbjct: 60 RPQPVKSEL-------DEEEERRKRRREKNKVAAARCRNKKKERTEFLQRESERLELMNA 112
Query: 274 ALRTEVAELRKE 285
L+T++ EL++E
Sbjct: 113 ELKTQIEELKQE 124
>gi|59938776 cAMP responsive element binding protein 5 isoform delta
[Homo sapiens]
Length = 369
Score = 37.7 bits (86), Expect = 0.013
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 215 PQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTA 274
PQP + ++V DE DE+ ++N AA R R R++ + +A L + N
Sbjct: 220 PQPTGGRRRRVV--DEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQ 277
Query: 275 LRTEVAELRKEVGKCKTIV 293
L+ EV+ L+ EV + K ++
Sbjct: 278 LQNEVSMLKNEVAQLKQLL 296
>gi|59938774 cAMP responsive element binding protein 5 isoform beta
[Homo sapiens]
Length = 501
Score = 37.7 bits (86), Expect = 0.013
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 215 PQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTA 274
PQP + ++V DE DE+ ++N AA R R R++ + +A L + N
Sbjct: 352 PQPTGGRRRRVV--DEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQ 409
Query: 275 LRTEVAELRKEVGKCKTIV 293
L+ EV+ L+ EV + K ++
Sbjct: 410 LQNEVSMLKNEVAQLKQLL 428
>gi|59938772 cAMP responsive element binding protein 5 isoform gamma
[Homo sapiens]
Length = 475
Score = 37.7 bits (86), Expect = 0.013
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 215 PQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTA 274
PQP + ++V DE DE+ ++N AA R R R++ + +A L + N
Sbjct: 326 PQPTGGRRRRVV--DEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQ 383
Query: 275 LRTEVAELRKEVGKCKTIV 293
L+ EV+ L+ EV + K ++
Sbjct: 384 LQNEVSMLKNEVAQLKQLL 402
>gi|59938770 cAMP responsive element binding protein 5 isoform alpha
[Homo sapiens]
Length = 508
Score = 37.7 bits (86), Expect = 0.013
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 215 PQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTA 274
PQP + ++V DE DE+ ++N AA R R R++ + +A L + N
Sbjct: 359 PQPTGGRRRRVV--DEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQ 416
Query: 275 LRTEVAELRKEVGKCKTIV 293
L+ EV+ L+ EV + K ++
Sbjct: 417 LQNEVSMLKNEVAQLKQLL 435
>gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]
Length = 269
Score = 37.7 bits (86), Expect = 0.013
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 215 PQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTA 274
P P +K+ PD E Y RR++NN+A ++SRD + + ++ + L EN
Sbjct: 174 PGPAREKSAGKRGPDRGSPE-YRQRRERNNIAVRKSRDKAKRRNQEMQQKLVELSAENEK 232
Query: 275 LRTEVAELRKEV 286
L V +L +++
Sbjct: 233 LHQRVEQLTRDL 244
>gi|45238854 basic leucine zipper transcription factor, ATF-like 2
[Homo sapiens]
Length = 274
Score = 37.7 bits (86), Expect = 0.013
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 230 EQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEV 286
+ K+++ +++KN AA+RSR K + + + LEK+N ALR E+ L+ E+
Sbjct: 14 DPKEQQRQLKKQKNRAAAQRSRQKHTDKADALHQQHESLEKDNLALRKEIQSLQAEL 70
>gi|22538422 activating transcription factor 2 [Homo sapiens]
Length = 505
Score = 37.0 bits (84), Expect = 0.022
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 215 PQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTA 274
PQ ++ +E DEK ++N AA R R R++ + +A L N
Sbjct: 334 PQTQSTSGRRRRAANEDPDEKRRKFLERNRAAASRCRQKRKVWVQSLEKKAEDLSSLNGQ 393
Query: 275 LRTEVAELRKEVGKCKTIV 293
L++EV LR EV + K ++
Sbjct: 394 LQSEVTLLRNEVAQLKQLL 412
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.129 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,031,222
Number of Sequences: 37866
Number of extensions: 754658
Number of successful extensions: 5527
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 5202
Number of HSP's gapped (non-prelim): 510
length of query: 303
length of database: 18,247,518
effective HSP length: 102
effective length of query: 201
effective length of database: 14,385,186
effective search space: 2891422386
effective search space used: 2891422386
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.