Guide to the Human Genome
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Name: JDP2 Sequence: fasta or formatted (163aa) NCBI GI: 205277419
Description:

Jun dimerization protein 2 isoform a

Referenced in:

CREB / ATF Family
Jun / Fos Complexes

Other entries for this name:
alt mRNA [163aa] Jun dimerization protein 2 isoform a
alt mRNA [163aa] Jun dimerization protein 2 isoform a
alt prot [174aa] Jun dimerization protein 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9          8           3
 C cysteine            1.2          2           1
 D aspartate           2.5          4           1
 E glutamate          13.5         22           4
 F phenylalanine       1.2          2           1
 G glycine             4.9          8           1
 H histidine           1.2          2           1
 I isoleucine          3.7          6           1
 K lysine              9.2         15           3
 L leucine            13.5         22           2
 M methionine          3.1          5           2
 N asparagine          3.7          6           1
 P proline             7.4         12           1
 Q glutamine           4.9          8           2
 R arginine            9.8         16           3
 S serine              4.9          8           2
 T threonine           5.5          9           2
 V valine              4.3          7           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Jun dimerization protein 2 isoform a 
JDP2                  1.000   Jun dimerization protein 2 isoform b 
JDP2                  1.000   Jun dimerization protein 2 isoform a 
JDP2                  1.000   Jun dimerization protein 2 isoform a 
ATF3                  0.367   activating transcription factor 3 isoform 1 
ATF3                  0.367   activating transcription factor 3 isoform 1 
FOSL1                 0.212   FOS-like antigen 1 
FOSL2                 0.185   FOS-like antigen 2 
FOSB                  0.182   FBJ murine osteosarcoma viral oncogene homolog B is...
FOS                   0.175   v-fos FBJ murine osteosarcoma viral oncogene homolog ...
BATF                  0.135   basic leucine zipper transcription factor, ATF-like [...
ATF3                  0.121   activating transcription factor 3 isoform 2 
BATF3                 0.121   basic leucine zipper transcription factor, ATF-like 3...
CREB5                 0.091   cAMP responsive element binding protein 5 isoform de...
CREB5                 0.091   cAMP responsive element binding protein 5 isoform be...
CREB5                 0.091   cAMP responsive element binding protein 5 isoform ga...
CREB5                 0.091   cAMP responsive element binding protein 5 isoform al...
ATF2                  0.088   activating transcription factor 2 
ATF7                  0.084   activating transcription factor 7 isoform 3 
ATF7                  0.084   activating transcription factor 7 isoform 2 
ATF7                  0.084   activating transcription factor 7 isoform 1 
CREB3L1               0.077   cAMP responsive element binding protein 3-like 1 [Ho...
CREB3L2               0.074   cAMP responsive element binding protein 3-like 2 [Ho...
JUN                   0.067   jun oncogene 
ATF5                  0.067   activating transcription factor 5 
CEBPA                 0.064   CCAAT/enhancer binding protein alpha 
JUND                  0.064   jun D proto-oncogene 
ATF6                  0.061   activating transcription factor 6 
CREB1                 0.057   cAMP responsive element binding protein 1 isoform A [...
CREB1                 0.057   cAMP responsive element binding protein 1 isoform B ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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