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Search of human proteins with 4505537
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4505537 oxytocin-neurophysin I preproprotein [Homo sapiens]
(125 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4505537 oxytocin-neurophysin I preproprotein [Homo sapiens] 278 8e-76
gi|13259533 arginine vasopressin-neurophysin II preproprotein [H... 204 2e-53
gi|54400749 keratin associated protein 5-1 [Homo sapiens] 38 0.002
gi|209571555 von Willebrand factor D and EGF domains [Homo sapiens] 36 0.007
gi|119703755 laminin, beta 2 precursor [Homo sapiens] 34 0.033
gi|54792100 erbB-3 isoform 1 precursor [Homo sapiens] 34 0.033
gi|4885631 tyrosine kinase with immunoglobulin-like and EGF-like... 32 0.095
gi|13994372 keratin associated protein 17-1 [Homo sapiens] 32 0.095
gi|122891874 keratin associated protein 5-5 [Homo sapiens] 32 0.12
gi|62243068 insulin-like growth factor binding protein 3 isoform... 32 0.16
gi|62243248 insulin-like growth factor binding protein 3 isoform... 32 0.16
gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens] 32 0.16
gi|126012573 low density lipoprotein-related protein 2 [Homo sap... 32 0.16
gi|134244285 Notch homolog 3 [Homo sapiens] 31 0.21
gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens] 31 0.21
gi|123173777 keratin associated protein 5-8 [Homo sapiens] 31 0.21
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 31 0.28
gi|38490568 keratin associated protein 10-4 [Homo sapiens] 31 0.28
gi|148727298 keratin associated protein 10-6 [Homo sapiens] 30 0.36
gi|165932370 FAT tumor suppressor homolog 4 [Homo sapiens] 30 0.36
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s... 30 0.47
gi|56090548 insulin-like growth factor binding protein-like 1 [H... 30 0.47
gi|60593036 keratin associated protein 5-3 [Homo sapiens] 30 0.47
gi|110347437 latent transforming growth factor beta binding prot... 30 0.62
gi|110347412 latent transforming growth factor beta binding prot... 30 0.62
gi|110347431 latent transforming growth factor beta binding prot... 30 0.62
gi|53292629 keratin associated protein 5-11 [Homo sapiens] 30 0.62
gi|238859649 keratin associated protein 10-8 [Homo sapiens] 29 0.81
gi|38490587 keratin associated protein 10-12 [Homo sapiens] 29 0.81
gi|125490370 type I hair keratin KA36 [Homo sapiens] 29 1.1
>gi|4505537 oxytocin-neurophysin I preproprotein [Homo sapiens]
Length = 125
Score = 278 bits (711), Expect = 8e-76
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 1 MAGPSLACCLLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLPCGPGGKGRCFGPNICCA 60
MAGPSLACCLLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLPCGPGGKGRCFGPNICCA
Sbjct: 1 MAGPSLACCLLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLPCGPGGKGRCFGPNICCA 60
Query: 61 EELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPDGCHADPACDAEA 120
EELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPDGCHADPACDAEA
Sbjct: 61 EELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPDGCHADPACDAEA 120
Query: 121 TFSQR 125
TFSQR
Sbjct: 121 TFSQR 125
>gi|13259533 arginine vasopressin-neurophysin II preproprotein [Homo
sapiens]
Length = 164
Score = 204 bits (518), Expect = 2e-53
Identities = 87/116 (75%), Positives = 97/116 (83%)
Query: 1 MAGPSLACCLLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLPCGPGGKGRCFGPNICCA 60
M L C LGLLA +SACY QNCP GGKRA DL++R+CLPCGPGGKGRCFGP+ICCA
Sbjct: 1 MPDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCA 60
Query: 61 EELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPDGCHADPAC 116
+ELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCA G+CC+ + C +P C
Sbjct: 61 DELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPEC 116
>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
Length = 278
Score = 38.1 bits (87), Expect = 0.002
Identities = 32/105 (30%), Positives = 34/105 (32%), Gaps = 21/105 (20%)
Query: 8 CCLLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLPCG--PGGKGRCFGPNICCAEELGC 65
CC + AC +C GG C CG G G C G C GC
Sbjct: 135 CCCKPMCCCVPACSCSSCGKGG-----------CGSCGCSKGACGSCGGSKGGCGSCGGC 183
Query: 66 FVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPDGC 110
G C C SG CGSG C V CCS C
Sbjct: 184 KGG------CGSCGGSKGGCGSGCGGCGSG--CGVPVCCCSCSSC 220
Score = 33.9 bits (76), Expect = 0.033
Identities = 32/113 (28%), Positives = 38/113 (33%), Gaps = 8/113 (7%)
Query: 8 CCLLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLPCGPGGKGRCFGPNICCAEELGCFV 67
CC + C +C GG ++ C CG G KG C C + GC
Sbjct: 47 CCCKPVCCRVPTCSCSSCGKGGCGSSGG-SKGGCGSCG-GCKGGC---GSCGGSKGGCGS 101
Query: 68 GTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPDGCHADPACDAEA 120
C C SG CGS C V CC P C PAC +
Sbjct: 102 CGGSKGGCGSCGGSKGGCGSGCGGCGSS--CCVPVCCCKPMCCCV-PACSCSS 151
Score = 28.9 bits (63), Expect = 1.1
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Query: 45 GPGGKGRCFGPNICCAEELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLC 104
G GG G +CC + + C V C + C G ACGS G G C
Sbjct: 122 GCGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGCSKG--ACGSCG--GSKGGC 177
Query: 105 CSPDGC 110
S GC
Sbjct: 178 GSCGGC 183
Score = 28.5 bits (62), Expect = 1.4
Identities = 22/72 (30%), Positives = 26/72 (36%), Gaps = 16/72 (22%)
Query: 41 CLPCGPG--GKGRCFGPNICCAEELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRC 98
C CG G G G +CC + + C V T C G+ CGS G
Sbjct: 28 CGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCSCSSC------------GKGGCGSSG-- 73
Query: 99 AVLGLCCSPDGC 110
G C S GC
Sbjct: 74 GSKGGCGSCGGC 85
Score = 26.2 bits (56), Expect = 6.8
Identities = 13/40 (32%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Query: 85 CQSGQKACGSG----GRCAVLGLCCSPDGCHADPACDAEA 120
C SG CGSG G + +CC C P C +
Sbjct: 24 CGSGCGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCSCSS 63
>gi|209571555 von Willebrand factor D and EGF domains [Homo sapiens]
Length = 1590
Score = 36.2 bits (82), Expect = 0.007
Identities = 34/105 (32%), Positives = 39/105 (37%), Gaps = 28/105 (26%)
Query: 26 PLGGKRAAPDLDVRKCLP-----------CGPGGK--GRCFGPNICCAEELGCFVGTAEA 72
P G R ++ KC P C P K G+C PNIC C G A
Sbjct: 1301 PCGKSRECVAPNICKCKPGYIGSNCQTALCDPDCKNHGKCIKPNIC-----QCLPGHGGA 1355
Query: 73 LRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPDGCHADPACD 117
C EE+ P PCQ G G C LC P G P C+
Sbjct: 1356 T-CDEEHCNP-PCQHG-------GTCLAGNLCTCPYG-FVGPRCE 1390
Score = 26.6 bits (57), Expect = 5.2
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 15/70 (21%)
Query: 3 GPSLACCLLGLLAL---TSACYIQNCPLGGKRAAPDL--------DVRKCLP-CGPGGK- 49
GPS C G T C +Q C GG+ AP + VR +P C P
Sbjct: 1502 GPSTCSCPSGWSGKRCNTPIC-LQKCKNGGECIAPSICHCPSSWEGVRCQIPICNPKCLY 1560
Query: 50 -GRCFGPNIC 58
GRC PN+C
Sbjct: 1561 GGRCIFPNVC 1570
>gi|119703755 laminin, beta 2 precursor [Homo sapiens]
Length = 1798
Score = 33.9 bits (76), Expect = 0.033
Identities = 31/87 (35%), Positives = 37/87 (42%), Gaps = 15/87 (17%)
Query: 43 PCGPGGKGR---CFGPNICCAEELGCFVGTAEALRCQEENYLP-----SPCQSGQKACGS 94
P PGG+ + C G NI + C T + LRC P P GQ A S
Sbjct: 976 PSRPGGRCQLCECSG-NIDPMDPDACDPHTGQCLRCLHHTEGPHCAHCKPGFHGQAARQS 1034
Query: 95 GGRCA--VLGL----CCSPDGCHADPA 115
RC +LG C SPD CH DP+
Sbjct: 1035 CHRCTCNLLGTNPQQCPSPDQCHCDPS 1061
>gi|54792100 erbB-3 isoform 1 precursor [Homo sapiens]
Length = 1342
Score = 33.9 bits (76), Expect = 0.033
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 39 RKCLPCGPGGKGRCFGPNICCAEELGCFVGTAEALRCQEENYLPSPCQSGQKACGSG 95
R C PC KGRC+GP +E+ T A +C + P+P Q C G
Sbjct: 181 RSCPPCHEVCKGRCWGPG---SEDCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGG 234
>gi|4885631 tyrosine kinase with immunoglobulin-like and EGF-like
domains 1 [Homo sapiens]
Length = 1138
Score = 32.3 bits (72), Expect = 0.095
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 39 RKCLPCGPGGKGRCFGPNICCAEELGCFVGTA-EALRCQEE---NYLPSPCQSGQKACGS 94
+ C PG G C G C + GC G+ +CQE + + C+ Q C +
Sbjct: 266 QSCQEQCPGISG-CRGLTFCLPDPYGCSCGSGWRGSQCQEACAPGHFGADCRL-QCQCQN 323
Query: 95 GGRCAVLGLCCSPDGCH 111
GG C C P G H
Sbjct: 324 GGTCDRFSGCVCPSGWH 340
>gi|13994372 keratin associated protein 17-1 [Homo sapiens]
Length = 105
Score = 32.3 bits (72), Expect = 0.095
Identities = 30/118 (25%), Positives = 34/118 (28%), Gaps = 41/118 (34%)
Query: 8 CCLLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLPCGPGGKGRCFGPNIC------CAE 61
CC G +C C GG G G G C G + C C
Sbjct: 23 CCQPGCCGCCGSC----CGCGGSGCG-----------GSGCGGSCCGSSCCGSGCGGCGG 67
Query: 62 ELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPDGCHADPACDAE 119
GC G + C G CGSG CC P C P CD +
Sbjct: 68 CGGCGGGCCGSSCC------------GSSCCGSG--------CCGPVCCQPTPICDTK 105
>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
Length = 237
Score = 32.0 bits (71), Expect = 0.12
Identities = 24/83 (28%), Positives = 26/83 (31%), Gaps = 10/83 (12%)
Query: 41 CLPCGPGGKGRCFGPNICCAEELGCFVGTAEALRCQEENYLPSPCQSGQKACGS-GGRCA 99
C CG GG G C G C + C V C C + CGS GG
Sbjct: 81 CSSCGKGGCGSCGGSKRGC---VSCGVSKGACGSCGGSKGGCGSCGGSKGGCGSCGGSKG 137
Query: 100 VLGLC------CSPDGCHADPAC 116
G C C GC C
Sbjct: 138 GCGSCGGSKGGCGSYGCSQSSCC 160
Score = 30.8 bits (68), Expect = 0.28
Identities = 23/77 (29%), Positives = 27/77 (35%), Gaps = 3/77 (3%)
Query: 44 CGPGGKGRCFGPNICCAEELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGL 103
CG G GR G C + GC G C C SG CG G + +
Sbjct: 10 CGSGCGGRGSGCGGCGSGCGGCGSGCGG---CGSGCGGCGGCGSGCAGCGGCGSGCCVPV 66
Query: 104 CCSPDGCHADPACDAEA 120
CC C PAC +
Sbjct: 67 CCCKPMCCCVPACSCSS 83
>gi|62243068 insulin-like growth factor binding protein 3 isoform
b precursor [Homo sapiens]
Length = 291
Score = 31.6 bits (70), Expect = 0.16
Identities = 30/100 (30%), Positives = 35/100 (35%), Gaps = 12/100 (12%)
Query: 2 AGPSLACCLLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLPCGPGGKGRCFGPNICCAE 61
A P+L L LL L + P V +C PC +C P CAE
Sbjct: 4 ARPTLWAAALTLLVLLRGPPVARAGASSAGLGP---VVRCEPCDARALAQCAPPPAVCAE 60
Query: 62 ---ELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRC 98
E GC G E PC + CGSG RC
Sbjct: 61 LVREPGC--GCCLTCALSE----GQPCGIYTERCGSGLRC 94
>gi|62243248 insulin-like growth factor binding protein 3 isoform
a precursor [Homo sapiens]
Length = 297
Score = 31.6 bits (70), Expect = 0.16
Identities = 30/100 (30%), Positives = 35/100 (35%), Gaps = 12/100 (12%)
Query: 2 AGPSLACCLLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLPCGPGGKGRCFGPNICCAE 61
A P+L L LL L + P V +C PC +C P CAE
Sbjct: 4 ARPTLWAAALTLLVLLRGPPVARAGASSAGLGP---VVRCEPCDARALAQCAPPPAVCAE 60
Query: 62 ---ELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRC 98
E GC G E PC + CGSG RC
Sbjct: 61 LVREPGC--GCCLTCALSE----GQPCGIYTERCGSGLRC 94
>gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens]
Length = 2765
Score = 31.6 bits (70), Expect = 0.16
Identities = 26/94 (27%), Positives = 35/94 (37%), Gaps = 15/94 (15%)
Query: 25 CPLGGKRAAPDLDVRKCLPCGPGGKGRCFGPNICCAEELGCFVGTAEALRCQEENYLPSP 84
C G K A D+ + +C+ GG G C N C+ + C+E + L
Sbjct: 624 CYSGWKGAECDVPMNQCIDPSCGGHGSCIDGNCVCS-------AGYKGEHCEEVDCLDPT 676
Query: 85 CQS------GQKAC--GSGGRCAVLGLCCSPDGC 110
C S G+ C G GG L PD C
Sbjct: 677 CSSHGVCVNGECLCSPGWGGLNCELARVQCPDQC 710
>gi|126012573 low density lipoprotein-related protein 2 [Homo
sapiens]
Length = 4655
Score = 31.6 bits (70), Expect = 0.16
Identities = 31/110 (28%), Positives = 38/110 (34%), Gaps = 27/110 (24%)
Query: 3 GPSLACC--LLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLPCGPGGKGRCFGPNICC- 59
GP+ C LL L+A + Q C R C+P RC G C
Sbjct: 4 GPAAVACTLLLALVACLAPASGQECDSAHFRCGSG----HCIPAD----WRCDGTKDCSD 55
Query: 60 -AEELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPD 108
A+E+GC V T CQ G C S G+C C D
Sbjct: 56 DADEIGCAVVT---------------CQQGYFKCQSEGQCIPNSWVCDQD 90
Score = 28.1 bits (61), Expect = 1.8
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Query: 50 GRCFGPNICCAEELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPD 108
GRC + C +E CF + E C + C + + C GGRC C D
Sbjct: 2874 GRCIPQHWYCDQETDCFDASDEPASC---GHSERTCLADEFKC-DGGRCIPSEWICDGD 2928
Score = 27.3 bits (59), Expect = 3.1
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 50 GRCFGPNICCAEELGCFVGTAEALRCQEENYLPSP-CQSGQKACGSGGRCAVLGLCCSPD 108
GRC C E+ C G+ E + + P P C + C +G ++ LC D
Sbjct: 3042 GRCISKTFVCDEDNDCGDGSDELMHL---CHTPEPTCPPHEFKCDNGRCIEMMKLCNHLD 3098
Query: 109 GC 110
C
Sbjct: 3099 DC 3100
Score = 26.2 bits (56), Expect = 6.8
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 10/84 (11%)
Query: 35 DLDVRKCL--PCGPGGKGRCFGPNICCAEEL-----GCFVGTAEALR-CQEENYLPSPCQ 86
D ++ CL PC + RC + E+ C GT E C++ P PC
Sbjct: 3872 DEELHLCLDVPCNSPNRFRCDNNRCIYSHEVCNGVDDCGDGTDETEEHCRKPT--PKPCT 3929
Query: 87 SGQKACGSGGRCAVLGLCCSPDGC 110
+ CG+G +C D C
Sbjct: 3930 EYEYKCGNGHCIPHDNVCDDADDC 3953
>gi|134244285 Notch homolog 3 [Homo sapiens]
Length = 2321
Score = 31.2 bits (69), Expect = 0.21
Identities = 42/140 (30%), Positives = 54/140 (38%), Gaps = 25/140 (17%)
Query: 1 MAGP--SLACCLLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLPCGPGG--KGRCFGPN 56
++GP + A CL + T C G D+D + PC GG K R G +
Sbjct: 436 LSGPCRNQATCLDRIGQFTCICM---AGFTGTYCEVDIDECQSSPCVNGGVCKDRVNGFS 492
Query: 57 ICCAEELGCFVGTAEALRCQEENYLPSPCQSGQKAC----GSGGRCAVL---GLC----- 104
C F G+ L E +PC++G K G RCA LC
Sbjct: 493 CTCPSG---FSGSTCQLDVDE--CASTPCRNGAKCVDQPDGYECRCAEGFEGTLCDRNVD 547
Query: 105 -CSPDGCHADPACDAEATFS 123
CSPD CH D A+FS
Sbjct: 548 DCSPDPCHHGRCVDGIASFS 567
Score = 26.2 bits (56), Expect = 6.8
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 19/74 (25%)
Query: 29 GKRAAPDLDVRKCLPCGPGGKGRCFGPNICCAEELGCFVGTAE----ALRCQEENYLPSP 84
G R A D+D PCGPG C + + F T C+++ LP
Sbjct: 881 GPRCARDVDECLSNPCGPG----------TCTDHVASFTCTCPPGYGGFHCEQD--LPDC 928
Query: 85 CQSGQKACGSGGRC 98
S +C +GG C
Sbjct: 929 SPS---SCFNGGTC 939
>gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]
Length = 4242
Score = 31.2 bits (69), Expect = 0.21
Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 17/89 (19%)
Query: 35 DLDVRKCLPCGPGGKGRCFGPNICC-----AEELG---CFVGTAEALRCQEENYLPSPCQ 86
D +R C P G +GRC C E+ G C G ++ RC++ + P
Sbjct: 274 DCGMRSC-PRGCSQRGRCENGRCVCNPGYTGEDCGVRSCPRGCSQRGRCKDGRCVCDPGY 332
Query: 87 SGQKA--------CGSGGRCAVLGLCCSP 107
+G+ CG GGRC C P
Sbjct: 333 TGEDCGTRSCPWDCGEGGRCVDGRCVCWP 361
Score = 28.9 bits (63), Expect = 1.1
Identities = 23/86 (26%), Positives = 31/86 (36%), Gaps = 5/86 (5%)
Query: 32 AAPDLDVRKCLPCGPGGKGRCFGPNICCAEELGCFVGTAEALR-CQEENYLPSPCQSGQK 90
+ PD R C P G +GRC G C + G +R C C++G+
Sbjct: 240 SGPDCSQRSC-PRGCSQRGRCEGGRCVCDPG---YTGDDCGMRSCPRGCSQRGRCENGRC 295
Query: 91 ACGSGGRCAVLGLCCSPDGCHADPAC 116
C G G+ P GC C
Sbjct: 296 VCNPGYTGEDCGVRSCPRGCSQRGRC 321
>gi|123173777 keratin associated protein 5-8 [Homo sapiens]
Length = 187
Score = 31.2 bits (69), Expect = 0.21
Identities = 26/86 (30%), Positives = 27/86 (31%), Gaps = 12/86 (13%)
Query: 34 PDLDVRKCLPCG--PGGKGRCFGPNICCAEELGCFVGTAEALRCQEENYLPSPCQSGQKA 91
P C CG GG+G C G C G G Q Y P C SG
Sbjct: 43 PACSCSSCGSCGGSKGGRGSCGGSKGDCGSCGGSKGGCGSCGCSQCSCYKPCCCSSG--- 99
Query: 92 CGSG-------GRCAVLGLCCSPDGC 110
CGS C CC P C
Sbjct: 100 CGSSCCQSSCCKPCCSQSSCCKPCSC 125
Score = 28.5 bits (62), Expect = 1.4
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 4/40 (10%)
Query: 85 CQSGQKACGSG----GRCAVLGLCCSPDGCHADPACDAEA 120
C SG CGSG G + +CC C PAC +
Sbjct: 10 CGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSS 49
Score = 26.9 bits (58), Expect = 4.0
Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 9/86 (10%)
Query: 41 CLPCGPGGKG---RCFGPNICCAEELGCFVGTAEALRCQE---ENYLPSPCQSGQKACGS 94
C CG G G C P ICC + + C V C C + CGS
Sbjct: 14 CGGCGSGCGGCGSSCCVP-ICCCKPVCCCVPACSCSSCGSCGGSKGGRGSCGGSKGDCGS 72
Query: 95 -GGRCAVLGLC-CSPDGCHADPACDA 118
GG G C CS C+ C +
Sbjct: 73 CGGSKGGCGSCGCSQCSCYKPCCCSS 98
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 30.8 bits (68), Expect = 0.28
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 42 LPCGPGG----KGRCFGPNICCAEELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGR 97
LPCGP G C + C + C G+ E L C P PC+ + CG+ G
Sbjct: 283 LPCGPQEAACRNGHCIPRDYLCDGQEDCEDGSDE-LDCGP----PPPCEPNEFPCGN-GH 336
Query: 98 CAVLGLCCSPD 108
CA+ C D
Sbjct: 337 CALKLWRCDGD 347
Score = 26.6 bits (57), Expect = 5.2
Identities = 24/89 (26%), Positives = 31/89 (34%), Gaps = 21/89 (23%)
Query: 33 APDLDVRKCLPCGPG---------GKGRCFGPNICCAEELGCFVGTAEALRCQEE--NYL 81
AP R+C C PG GK R I +E G + EA RC+ L
Sbjct: 843 APGYTGRRCESCAPGYEGNPIQPGGKCRPVNQEIVRCDERGSMGTSGEACRCKNNVVGRL 902
Query: 82 PSPCQSGQKACGSGGRCAVLGLCCSPDGC 110
+ C G + +PDGC
Sbjct: 903 CNECADGSFHLSTR----------NPDGC 921
>gi|38490568 keratin associated protein 10-4 [Homo sapiens]
Length = 401
Score = 30.8 bits (68), Expect = 0.28
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 18/119 (15%)
Query: 8 CCLLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLP--CGPGGKGRCFGPNICCAEELGC 65
CC+ +S C +C ++P C+P C P C G + C ++ C
Sbjct: 124 CCVPVCCGDSSCCQQSSCQSACCTSSP-CQQACCVPICCKPV----CSGISSSCCQQSSC 178
Query: 66 FVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPDGCHADPACDAEATFSQ 124
+ + C + PSPCQSG C S + CC C PAC ++ Q
Sbjct: 179 V--SCVSSPCCQAVCEPSPCQSG---CIS----SCTPSCCQQSSC--QPACCTSSSCQQ 226
Score = 28.1 bits (61), Expect = 1.8
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 12/75 (16%)
Query: 52 CFGPNIC---CAEELGC--FVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCS 106
C P C C + +G A +L CQ+ + P+ C S Q G C V +CC
Sbjct: 270 CCVPVCCKPVCCKPVGSVPICSGASSLCCQQSSCQPACCTSSQSQQG----CCV-PVCCK 324
Query: 107 PDGCHADPACDAEAT 121
P C P C ++
Sbjct: 325 PVSC--VPVCSGASS 337
>gi|148727298 keratin associated protein 10-6 [Homo sapiens]
Length = 365
Score = 30.4 bits (67), Expect = 0.36
Identities = 28/113 (24%), Positives = 43/113 (38%), Gaps = 11/113 (9%)
Query: 8 CCLLGLLALTSACYIQNCPLGGKRAAPDLDVRKCLP--CGPGGKGRCFGPNICCAEELGC 65
CC+ +S C +C ++P C+P C P C G + C ++ C
Sbjct: 124 CCVSVCCGDSSCCQQSSCQSACCTSSP-CQQACCVPVCCKPV----CSGISSSCCQQSSC 178
Query: 66 FVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPDGCHADPACDA 118
+ + C + PSPCQSG + + C C P C + P A
Sbjct: 179 V--SCVSSPCCQAVCEPSPCQSGCTSSCTPSCCQQSS--CQPTCCTSSPCQQA 227
>gi|165932370 FAT tumor suppressor homolog 4 [Homo sapiens]
Length = 4981
Score = 30.4 bits (67), Expect = 0.36
Identities = 29/102 (28%), Positives = 37/102 (36%), Gaps = 19/102 (18%)
Query: 23 QNCPLGGKRAAPDLDVRKCLPCGPGGKGRCFGPNIC----CAEELGCFVGTAEALRCQEE 78
++ P GK + + P K C GPNIC C +L C + A RC
Sbjct: 4374 ESLPFSGKHSLASIS-----KTDPSVKIGCRGPNICASNPCWGDLLC-INQWYAYRCVP- 4426
Query: 79 NYLPSPCQSGQKACGSGGRCAV---LGLCCSPDGCHADPACD 117
P C S C +GG C G CS H C+
Sbjct: 4427 ---PGDCAS--HPCQNGGSCEPGLHSGFTCSCPDSHTGRTCE 4463
>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
sapiens]
Length = 1037
Score = 30.0 bits (66), Expect = 0.47
Identities = 26/83 (31%), Positives = 29/83 (34%), Gaps = 11/83 (13%)
Query: 42 LPCGPGGKGRCFGPNICCAEELGCFVGTAEALRCQ---EENYLPSPCQSGQKACGSGGRC 98
+PC PG G + CA E C T A C + PC GQ G RC
Sbjct: 479 VPCPPGTWGFSCNASCQCAHEAVCSPQTG-ACTCTPGWHGAHCQLPCPKGQFGEGCASRC 537
Query: 99 AVLGLCCSPDGC---HADPACDA 118
C DGC H C A
Sbjct: 538 D----CDHSDGCDPVHGRCQCQA 556
>gi|56090548 insulin-like growth factor binding protein-like 1 [Homo
sapiens]
Length = 278
Score = 30.0 bits (66), Expect = 0.47
Identities = 38/128 (29%), Positives = 50/128 (39%), Gaps = 31/128 (24%)
Query: 4 PSLACCLLGLLA-LTSACYIQNCPLGGKRAAPDLDVRKCLPCGPGG---KGRCFGPNICC 59
P L LL LL L+ + I++ +GG+R KC PC P G C P I
Sbjct: 9 PLLLLLLLPLLPPLSPSLGIRD--VGGRRP-------KCGPCRPEGCPAPAPCPAPGISA 59
Query: 60 AEELGCFVGTAEALRCQEENYLPSPCQSGQKACG--SGGRCAVLGLCCSPDGCHADPACD 117
+E GC RC + +CG +GGRC GL C+ A P
Sbjct: 60 LDECGC------CARC---------LGAEGASCGGRAGGRCGP-GLVCASQAAGAAPEGT 103
Query: 118 AEATFSQR 125
+QR
Sbjct: 104 GLCVCAQR 111
>gi|60593036 keratin associated protein 5-3 [Homo sapiens]
Length = 238
Score = 30.0 bits (66), Expect = 0.47
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 85 CQSGQKACGSGGRCAVLGLCCSPDGCHADPACDAEA 120
C SG CGSG C V CC P C PAC +
Sbjct: 24 CGSGYGGCGSG--CCVPVCCCKPVCCCV-PACSCSS 56
Score = 27.7 bits (60), Expect = 2.3
Identities = 18/62 (29%), Positives = 22/62 (35%), Gaps = 13/62 (20%)
Query: 41 CLPCGPG----GKGRCFGPNICCAEELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGG 96
C CG G G G C +CC + + C V C C + CGS G
Sbjct: 21 CGGCGSGYGGCGSGCCVP--VCCCKPVCCCVPACSCSSC-------GSCGGSKGVCGSCG 71
Query: 97 RC 98
C
Sbjct: 72 GC 73
>gi|110347437 latent transforming growth factor beta binding protein
4 isoform c [Homo sapiens]
Length = 1557
Score = 29.6 bits (65), Expect = 0.62
Identities = 35/147 (23%), Positives = 46/147 (31%), Gaps = 50/147 (34%)
Query: 9 CLLGLLALTSACYIQNCPLGGKRAAPDL----DVRKCLPCGP------------------ 46
C G+ T + CP G RA PDL DV +C GP
Sbjct: 863 CQSGICTNTDGSFECICP-PGHRAGPDLASCLDVDECRERGPALCGSQRCENSPGSYRCV 921
Query: 47 ---------GGKGRC--------FGPNICCAEELGCFVGTAEALRCQEENYLPSPCQSGQ 89
G +G C +GP IC A+ G+ + Y P+P
Sbjct: 922 RDCDPGYHAGPEGTCDDVDECQEYGPEICGAQRCENTPGSYRCTPACDPGYQPTP----- 976
Query: 90 KACGSGGRCAVLGLCCSPDGCHADPAC 116
GG C + C + C A C
Sbjct: 977 -----GGGCQDVDECRNRSFCGAHAVC 998
>gi|110347412 latent transforming growth factor beta binding protein 4
isoform b [Homo sapiens]
Length = 1587
Score = 29.6 bits (65), Expect = 0.62
Identities = 35/147 (23%), Positives = 46/147 (31%), Gaps = 50/147 (34%)
Query: 9 CLLGLLALTSACYIQNCPLGGKRAAPDL----DVRKCLPCGP------------------ 46
C G+ T + CP G RA PDL DV +C GP
Sbjct: 893 CQSGICTNTDGSFECICP-PGHRAGPDLASCLDVDECRERGPALCGSQRCENSPGSYRCV 951
Query: 47 ---------GGKGRC--------FGPNICCAEELGCFVGTAEALRCQEENYLPSPCQSGQ 89
G +G C +GP IC A+ G+ + Y P+P
Sbjct: 952 RDCDPGYHAGPEGTCDDVDECQEYGPEICGAQRCENTPGSYRCTPACDPGYQPTP----- 1006
Query: 90 KACGSGGRCAVLGLCCSPDGCHADPAC 116
GG C + C + C A C
Sbjct: 1007 -----GGGCQDVDECRNRSFCGAHAVC 1028
>gi|110347431 latent transforming growth factor beta binding protein 4
isoform a [Homo sapiens]
Length = 1624
Score = 29.6 bits (65), Expect = 0.62
Identities = 35/147 (23%), Positives = 46/147 (31%), Gaps = 50/147 (34%)
Query: 9 CLLGLLALTSACYIQNCPLGGKRAAPDL----DVRKCLPCGP------------------ 46
C G+ T + CP G RA PDL DV +C GP
Sbjct: 930 CQSGICTNTDGSFECICP-PGHRAGPDLASCLDVDECRERGPALCGSQRCENSPGSYRCV 988
Query: 47 ---------GGKGRC--------FGPNICCAEELGCFVGTAEALRCQEENYLPSPCQSGQ 89
G +G C +GP IC A+ G+ + Y P+P
Sbjct: 989 RDCDPGYHAGPEGTCDDVDECQEYGPEICGAQRCENTPGSYRCTPACDPGYQPTP----- 1043
Query: 90 KACGSGGRCAVLGLCCSPDGCHADPAC 116
GG C + C + C A C
Sbjct: 1044 -----GGGCQDVDECRNRSFCGAHAVC 1065
>gi|53292629 keratin associated protein 5-11 [Homo sapiens]
Length = 156
Score = 29.6 bits (65), Expect = 0.62
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 4/40 (10%)
Query: 85 CQSGQKACGSG----GRCAVLGLCCSPDGCHADPACDAEA 120
C SG CGSG G + +CC C PAC +
Sbjct: 17 CGSGSGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSS 56
Score = 28.9 bits (63), Expect = 1.1
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 19/78 (24%)
Query: 45 GPGGKGRCFGPNICCAEELGCFVGTAEALRCQEENYLPSPCQSGQKACG----SGGRCAV 100
G GG G ICC + + C V C C + CG S G C
Sbjct: 27 GCGGCGSSCCVPICCCKPVCCCVPACSCSSC-------GSCGGSKGGCGSCGSSKGGCGS 79
Query: 101 LGL--------CCSPDGC 110
G CCS GC
Sbjct: 80 CGCSQSNCCKPCCSSSGC 97
>gi|238859649 keratin associated protein 10-8 [Homo sapiens]
Length = 259
Score = 29.3 bits (64), Expect = 0.81
Identities = 25/86 (29%), Positives = 29/86 (33%), Gaps = 23/86 (26%)
Query: 52 CFGPNIC---CAEELGCFVGTAEALRCQEENYLPSPCQSG---------------QKACG 93
C P C C C AL C + PSPCQSG Q AC
Sbjct: 50 CCEPRSCASSCCTPSCCAPAPCLALVCAPVSCEPSPCQSGCTDSCTPSCCQQSSCQPACC 109
Query: 94 SGGRCAVLGLCCSPDGCHAD---PAC 116
+ C CC P C ++ P C
Sbjct: 110 TSSPCQ--QACCVPVCCKSNCCKPVC 133
>gi|38490587 keratin associated protein 10-12 [Homo sapiens]
Length = 245
Score = 29.3 bits (64), Expect = 0.81
Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
Query: 52 CFGPNICCAEELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPDGCH 111
C GP+ C ++ C + CQ+ +P C + C LCC C
Sbjct: 124 CCGPSSSCCQQSSCQPACCISSPCQQSCCVPVCC---KPICCVPVCSGASSLCCQQSSC- 179
Query: 112 ADPAC 116
PAC
Sbjct: 180 -QPAC 183
Score = 25.8 bits (55), Expect = 8.9
Identities = 21/63 (33%), Positives = 24/63 (38%), Gaps = 13/63 (20%)
Query: 58 CCAE----ELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVLGLCCSPDGCHAD 113
CCA L C + + C PSPCQSG C S + CC C
Sbjct: 41 CCAPAPCLSLVCTPVSRVSSPCCRVTCEPSPCQSG---CTS----SCTPSCCQQSSC--Q 91
Query: 114 PAC 116
PAC
Sbjct: 92 PAC 94
>gi|125490370 type I hair keratin KA36 [Homo sapiens]
Length = 431
Score = 28.9 bits (63), Expect = 1.1
Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 6/66 (9%)
Query: 44 CGPGGKGRCFG--PNICCAEELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAVL 101
C P G G P C+ E C GT RCQ ++L + G C
Sbjct: 10 CSPESCGTASGCAPASSCSVETACLPGTCATSRCQTPSFL----SRSRGLTGCLLPCYFT 65
Query: 102 GLCCSP 107
G C SP
Sbjct: 66 GSCNSP 71
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.141 0.497
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,515,128
Number of Sequences: 37866
Number of extensions: 354414
Number of successful extensions: 920
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 825
Number of HSP's gapped (non-prelim): 156
length of query: 125
length of database: 18,247,518
effective HSP length: 90
effective length of query: 35
effective length of database: 14,839,578
effective search space: 519385230
effective search space used: 519385230
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.