Guide to the Human Genome
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Name: IGFBP3 Sequence: fasta or formatted (297aa) NCBI GI: 62243248
Description:

insulin-like growth factor binding protein 3 isoform a precursor

Referenced in:

Growth Hormone and Related Hormones

Other entries for this name:
alt prot [291aa] insulin-like growth factor binding protein 3 isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         26           3
 C cysteine            6.1         18           2
 D aspartate           4.0         12           1
 E glutamate           6.1         18           2
 F phenylalanine       1.7          5           1
 G glycine             8.1         24           1
 H histidine           2.4          7           1
 I isoleucine          2.0          6           4
 K lysine              6.4         19           3
 L leucine             8.4         25           2
 M methionine          1.0          3           1
 N asparagine          2.0          6           1
 P proline             9.8         29           3
 Q glutamine           3.7         11           1
 R arginine            7.7         23           2
 S serine              9.1         27           2
 T threonine           3.7         11           2
 V valine              5.4         16           2
 W tryptophan          0.7          2           1
 Y tyrosine            3.0          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   insulin-like growth factor binding protein 3 isoform... 
IGFBP3                0.967   insulin-like growth factor binding protein 3 isoform...
IGFBP5                0.345   insulin-like growth factor binding protein 5 
IGFBP4                0.212   insulin-like growth factor binding protein 4 precurs...
IGFBP2                0.207   insulin-like growth factor binding protein 2, 36kDa ...
IGFBP6                0.178   insulin-like growth factor binding protein 6 
IGFBP1                0.160   insulin-like growth factor binding protein 1 precurso...
HTRA1                 0.058   HtrA serine peptidase 1 precursor 
SPOCK1                0.050   sparc/osteonectin, cwcv and kazal-like domains proteo...
SPOCK3                0.045   testican 3 isoform 1 
SPOCK3                0.045   testican 3 isoform 2 
SPOCK2                0.045   sparc/osteonectin, cwcv and kazal-like domains proteo...
IGFBPL1               0.043   insulin-like growth factor binding protein-like 1 [H...
HTRA3                 0.040   HtrA serine peptidase 3 
SMOC2                 0.038   SPARC related modular calcium binding 2 
NID2                  0.038   nidogen 2 precursor 
IGFBP7                0.037   insulin-like growth factor binding protein 7 
NID1                  0.035   nidogen 1 precursor 
NOV                   0.033   nephroblastoma overexpressed precursor 
ESM1                  0.033   endothelial cell-specific molecule 1 isoform a precur...
ESM1                  0.033   endothelial cell-specific molecule 1 isoform b prec...
SMOC1                 0.030   secreted modular calcium-binding protein 1 isoform 1...
SMOC1                 0.030   secreted modular calcium-binding protein 1 isoform 2...
KAZALD1               0.027   Kazal-type serine peptidase inhibitor domain 1 precu...
TG                    0.027   thyroglobulin 
CRIM1                 0.025   cysteine-rich motor neuron 1 
WISP2                 0.022   WNT1 inducible signaling pathway protein 2 precursor ...
EPCAM                 0.018   epithelial cell adhesion molecule precursor 
SCARF2                0.018   scavenger receptor class F, member 2 isoform 1 [Homo...
SCARF2                0.018   scavenger receptor class F, member 2 isoform 2 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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