Guide to the Human Genome
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Name: IGFBPL1 Sequence: fasta or formatted (278aa) NCBI GI: 56090548
Description:

insulin-like growth factor binding protein-like 1

Referenced in:

Growth Hormone and Related Hormones

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         29           2
 C cysteine            6.5         18           2
 D aspartate           3.6         10           2
 E glutamate           5.0         14           2
 F phenylalanine       1.1          3           1
 G glycine            11.2         31           2
 H histidine           3.6         10           1
 I isoleucine          2.2          6           1
 K lysine              2.2          6           1
 L leucine            10.4         29           7
 M methionine          1.1          3           1
 N asparagine          1.4          4           1
 P proline            11.2         31           2
 Q glutamine           2.2          6           1
 R arginine            7.9         22           2
 S serine              6.1         17           1
 T threonine           4.0         11           1
 V valine              8.3         23           4
 W tryptophan          0.7          2           1
 Y tyrosine            1.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   insulin-like growth factor binding protein-like 1 [H... 
IGFBP7                0.355   insulin-like growth factor binding protein 7 
KAZALD1               0.265   Kazal-type serine peptidase inhibitor domain 1 precu...
HTRA1                 0.112   HtrA serine peptidase 1 precursor 
HTRA4                 0.105   HtrA serine peptidase 4 precursor 
HTRA3                 0.085   HtrA serine peptidase 3 
OBSL1                 0.060   obscurin-like 1 
WFIKKN1               0.055   WAP, follistatin/kazal, immunoglobulin, kunitz and n...
LRIT3                 0.052   leucine-rich repeat, immunoglobulin-like and transm...
IGFBP3                0.046   insulin-like growth factor binding protein 3 isoform...
IGFBP3                0.046   insulin-like growth factor binding protein 3 isoform...
IGFBP2                0.046   insulin-like growth factor binding protein 2, 36kDa ...
HMCN1                 0.044   hemicentin 1 
AGRN                  0.044   agrin 
NOV                   0.044   nephroblastoma overexpressed precursor 
WISP2                 0.044   WNT1 inducible signaling pathway protein 2 precursor ...
CRIM1                 0.043   cysteine-rich motor neuron 1 
PTPRS                 0.041   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.041   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.041   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.041   protein tyrosine phosphatase, receptor type, sigma ...
HSPG2                 0.041   heparan sulfate proteoglycan 2 
IGDCC3                0.041   putative neuronal cell adhesion molecule 
HMCN2                 0.041   PREDICTED: hemicentin 2 
HMCN2                 0.039   PREDICTED: hemicentin 2 
HMCN2                 0.039   PREDICTED: hemicentin 2 
KRTAP17-1             0.037   keratin associated protein 17-1 
ESM1                  0.037   endothelial cell-specific molecule 1 isoform b prec...
LOC100292387          0.037   PREDICTED: similar to hemicentin 2 
LOC100289200          0.037   PREDICTED: hypothetical protein XP_002342997 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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