USP49 13030

Name: USP49	Sequence: fasta or formatted (640aa)		NCBI GI: 21361749
Description: ubiquitin thioesterase 49		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 43 2 C cysteine 4.1 26 2 D aspartate 3.3 21 1 E glutamate 7.3 47 2 F phenylalanine 3.3 21 1 G glycine 5.3 34 2 H histidine 3.3 21 2 I isoleucine 2.5 16 1 K lysine 5.8 37 2 L leucine 12.8 82 3 M methionine 2.0 13 1 N asparagine 3.1 20 1 P proline 4.7 30 2 Q glutamine 4.8 31 2 R arginine 9.7 62 5 S serine 6.9 44 2 T threonine 5.3 34 2 V valine 5.0 32 2 W tryptophan 1.6 10 1 Y tyrosine 2.5 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin thioesterase 49 USP44 0.572 ubiquitin thiolesterase 44 USP44 0.572 ubiquitin thiolesterase 44 USP3 0.113 ubiquitin thiolesterase 3 USP2 0.066 ubiquitin specific peptidase 2 isoform b USP2 0.066 ubiquitin specific peptidase 2 isoform a USP8 0.063 ubiquitin specific peptidase 8 USP8 0.063 ubiquitin specific peptidase 8 USP8 0.063 ubiquitin specific peptidase 8 USP27X 0.062 X-linked ubiquitin thioesterase 27 USP22 0.062 ubiquitin thiolesterase 22 USP51 0.061 ubiquitin specific protease 51 USP20 0.050 ubiquitin specific protease 20 USP20 0.050 ubiquitin specific protease 20 USP20 0.050 ubiquitin specific protease 20 USP50 0.050 ubiquitin specific protease 50 USP46 0.048 ubiquitin specific peptidase 46 isoform 2 USP46 0.048 ubiquitin specific peptidase 46 isoform 1 USP48 0.048 ubiquitin specific protease 48 isoform b USP48 0.048 ubiquitin specific protease 48 isoform a USP12 0.047 ubiquitin thiolesterase 12 USP42 0.046 ubiquitin specific peptidase 42 USP21 0.045 ubiquitin-specific protease 21 USP21 0.045 ubiquitin-specific protease 21 USP36 0.043 ubiquitin specific peptidase 36 USP15 0.041 ubiquitin specific peptidase 15 USP16 0.040 ubiquitin specific protease 16 isoform b USP16 0.040 ubiquitin specific protease 16 isoform a USP16 0.040 ubiquitin specific protease 16 isoform a USP6 0.038 ubiquitin specific protease 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.