Name: USP49 | Sequence: fasta or formatted (640aa) | NCBI GI: 21361749 | |
Description: ubiquitin thioesterase 49
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Referenced in: Ubiquitin and Related Protein Modifications
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.7 43 2 C cysteine 4.1 26 2 D aspartate 3.3 21 1 E glutamate 7.3 47 2 F phenylalanine 3.3 21 1 G glycine 5.3 34 2 H histidine 3.3 21 2 I isoleucine 2.5 16 1 K lysine 5.8 37 2 L leucine 12.8 82 3 M methionine 2.0 13 1 N asparagine 3.1 20 1 P proline 4.7 30 2 Q glutamine 4.8 31 2 R arginine 9.7 62 5 S serine 6.9 44 2 T threonine 5.3 34 2 V valine 5.0 32 2 W tryptophan 1.6 10 1 Y tyrosine 2.5 16 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 ubiquitin thioesterase 49 USP44 0.572 ubiquitin thiolesterase 44 USP44 0.572 ubiquitin thiolesterase 44 USP3 0.113 ubiquitin thiolesterase 3 USP2 0.066 ubiquitin specific peptidase 2 isoform b USP2 0.066 ubiquitin specific peptidase 2 isoform a USP8 0.063 ubiquitin specific peptidase 8 USP8 0.063 ubiquitin specific peptidase 8 USP8 0.063 ubiquitin specific peptidase 8 USP27X 0.062 X-linked ubiquitin thioesterase 27 USP22 0.062 ubiquitin thiolesterase 22 USP51 0.061 ubiquitin specific protease 51 USP20 0.050 ubiquitin specific protease 20 USP20 0.050 ubiquitin specific protease 20 USP20 0.050 ubiquitin specific protease 20 USP50 0.050 ubiquitin specific protease 50 USP46 0.048 ubiquitin specific peptidase 46 isoform 2 USP46 0.048 ubiquitin specific peptidase 46 isoform 1 USP48 0.048 ubiquitin specific protease 48 isoform b USP48 0.048 ubiquitin specific protease 48 isoform a USP12 0.047 ubiquitin thiolesterase 12 USP42 0.046 ubiquitin specific peptidase 42 USP21 0.045 ubiquitin-specific protease 21 USP21 0.045 ubiquitin-specific protease 21 USP36 0.043 ubiquitin specific peptidase 36 USP15 0.041 ubiquitin specific peptidase 15 USP16 0.040 ubiquitin specific protease 16 isoform b USP16 0.040 ubiquitin specific protease 16 isoform a USP16 0.040 ubiquitin specific protease 16 isoform a USP6 0.038 ubiquitin specific protease 6Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.