Guide to the Human Genome
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Name: USP44 Sequence: fasta or formatted (712aa) NCBI GI: 109134332
Description:

ubiquitin thiolesterase 44

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt mRNA [712aa] ubiquitin thiolesterase 44
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         33           1
 C cysteine            4.2         30           2
 D aspartate           3.8         27           2
 E glutamate           6.9         49           2
 F phenylalanine       3.5         25           1
 G glycine             4.9         35           2
 H histidine           3.5         25           2
 I isoleucine          4.1         29           2
 K lysine              6.0         43           2
 L leucine            11.1         79           3
 M methionine          2.5         18           1
 N asparagine          3.7         26           2
 P proline             4.1         29           2
 Q glutamine           6.3         45           2
 R arginine            5.5         39           3
 S serine              9.0         64           2
 T threonine           5.6         40           2
 V valine              6.2         44           2
 W tryptophan          1.5         11           1
 Y tyrosine            2.9         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin thiolesterase 44 
USP44                 1.000   ubiquitin thiolesterase 44 
USP49                 0.513   ubiquitin thioesterase 49 
USP3                  0.125   ubiquitin thiolesterase 3 
USP8                  0.081   ubiquitin specific peptidase 8 
USP8                  0.081   ubiquitin specific peptidase 8 
USP8                  0.081   ubiquitin specific peptidase 8 
USP27X                0.077   X-linked ubiquitin thioesterase 27 
USP22                 0.075   ubiquitin thiolesterase 22 
USP51                 0.074   ubiquitin specific protease 51 
USP2                  0.065   ubiquitin specific peptidase 2 isoform b 
USP2                  0.065   ubiquitin specific peptidase 2 isoform a 
USP21                 0.056   ubiquitin-specific protease 21 
USP21                 0.056   ubiquitin-specific protease 21 
USP42                 0.056   ubiquitin specific peptidase 42 
USP20                 0.054   ubiquitin specific protease 20 
USP36                 0.053   ubiquitin specific peptidase 36 
USP48                 0.053   ubiquitin specific protease 48 isoform b 
USP48                 0.053   ubiquitin specific protease 48 isoform a 
USP12                 0.051   ubiquitin thiolesterase 12 
DUB3                  0.051   deubiquitinating enzyme 3 
USP46                 0.049   ubiquitin specific peptidase 46 isoform 2 
USP46                 0.049   ubiquitin specific peptidase 46 isoform 1 
USP17L3               0.048   PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17...
USP50                 0.047   ubiquitin specific protease 50 
USP17L8               0.047   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd...
USP17L4               0.047   PREDICTED: Inactive ubiquitin carboxyl-terminal hyd...
LOC100287144          0.045   PREDICTED: hypothetical protein XP_002342471 
LOC728379             0.045   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
USP17                 0.045   ubiquitin specific peptidase 17 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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