Guide to the Human Genome
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Name: LOC729792 Sequence: fasta or formatted (1531aa) NCBI GI: 239754269
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {1612aa} PREDICTED: hypothetical protein
alt prot {1521aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7        133           2
 C cysteine            0.3          4           1
 D aspartate           1.0         16           1
 E glutamate          10.1        154           1
 F phenylalanine       1.1         17           2
 G glycine             9.7        149           3
 H histidine           1.2         18           1
 I isoleucine          2.7         42           2
 K lysine              0.7         11           1
 L leucine             1.8         28           1
 M methionine          1.8         27           1
 N asparagine          1.2         18           1
 P proline             1.3         20           1
 Q glutamine           0.3          4           1
 R arginine            0.5          8           1
 S serine             18.2        279           3
 T threonine          33.8        517           5
 V valine              4.8         74           2
 W tryptophan          0.1          1           1
 Y tyrosine            0.7         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100294136          1.000   PREDICTED: hypothetical protein 
LOC100294091          1.000   PREDICTED: hypothetical protein 
LOC729792             0.991   PREDICTED: hypothetical protein 
LOC730401             0.990   PREDICTED: hypothetical protein 
LOC100294249          0.990   PREDICTED: hypothetical protein XP_002344067 
LOC100294501          0.989   PREDICTED: hypothetical protein 
LOC729792             0.979   PREDICTED: hypothetical protein 
LOC100294204          0.978   PREDICTED: hypothetical protein 
LOC100294238          0.977   PREDICTED: hypothetical protein 
MUC2                  0.166   mucin 2 precursor 
MUC17                 0.148   mucin 17 
MUC12                 0.132   PREDICTED: mucin 12 
MUC5B                 0.122   mucin 5, subtype B, tracheobronchial 
MUC12                 0.122   PREDICTED: mucin 12, cell surface associated 
MUC5AC                0.120   mucin 5AC 
MUC12                 0.111   PREDICTED: mucin 12 
LOC100294236          0.109   PREDICTED: similar to diffuse panbronchiolitis crit...
MUC4                  0.101   mucin 4 isoform a 
MUC3A                 0.091   PREDICTED: mucin 3A, intestinal 
LOC100131514          0.089   PREDICTED: similar to hCG1747327, partial 
MUC6                  0.088   mucin 6, gastric 
MUC16                 0.087   mucin 16 
LOC100134138          0.079   PREDICTED: similar to mucin, partial 
MUC3A                 0.078   PREDICTED: mucin 3A, cell surface associated, parti...
DPCR1                 0.070   diffuse panbronchiolitis critical region 1 protein ...
LOC100133714          0.069   PREDICTED: similar to Mucin-12, partial 
MUC21                 0.066   mucin 21 
GPR112                0.061   G-protein coupled receptor 112 
DSPP                  0.059   dentin sialophosphoprotein preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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