NPAS4 10909

Name: NPAS4	Sequence: fasta or formatted (802aa)		NCBI GI: 194097477
Description: neuronal PAS domain protein 4		Referenced in: Helix-Loop-Helix Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 63 2 C cysteine 1.6 13 1 D aspartate 5.2 42 1 E glutamate 7.5 60 2 F phenylalanine 5.0 40 2 G glycine 6.9 55 2 H histidine 2.4 19 1 I isoleucine 2.5 20 2 K lysine 2.4 19 1 L leucine 13.1 105 2 M methionine 1.2 10 1 N asparagine 2.1 17 2 P proline 10.3 83 2 Q glutamine 5.1 41 2 R arginine 3.4 27 2 S serine 10.2 82 2 T threonine 6.5 52 1 V valine 3.2 26 2 W tryptophan 0.9 7 1 Y tyrosine 2.6 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 neuronal PAS domain protein 4 SIM2 0.053 single-minded homolog 2 long isoform SIM2 0.050 single-minded homolog 2 short isoform SIM1 0.044 single-minded homolog 1 HIF3A 0.044 hypoxia inducible factor 3, alpha subunit isoform a ... HIF3A 0.044 hypoxia inducible factor 3, alpha subunit isoform c ... NPAS1 0.042 neuronal PAS domain protein 1 HIF1A 0.040 hypoxia-inducible factor 1, alpha subunit isoform 2 ... HIF1A 0.040 hypoxia-inducible factor 1, alpha subunit isoform 1 [... EPAS1 0.039 endothelial PAS domain protein 1 HIF3A 0.039 hypoxia inducible factor 3, alpha subunit isoform b ... AHR 0.038 aryl hydrocarbon receptor NPAS3 0.033 neuronal PAS domain protein 3 isoform 1 NPAS3 0.028 neuronal PAS domain protein 3 isoform 2 AHRR 0.021 arylhydrocarbon receptor repressor ARNTL 0.021 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.021 aryl hydrocarbon receptor nuclear translocator-like ... ARNTL 0.021 aryl hydrocarbon receptor nuclear translocator-like ... LOC284297 0.019 hypothetical protein LOC284297 ARNT 0.019 aryl hydrocarbon receptor nuclear translocator isofo... ARNT 0.019 aryl hydrocarbon receptor nuclear translocator isofor... FLJ22184 0.018 PREDICTED: hypothetical protein FLJ22184 CLOCK 0.018 clock NACA 0.017 nascent polypeptide-associated complex alpha subuni... TXNDC2 0.016 thioredoxin domain-containing 2 isoform 1 TXNDC2 0.016 thioredoxin domain-containing 2 isoform 2 TXNDC2 0.016 thioredoxin domain-containing 2 isoform 1 ARNTL2 0.016 aryl hydrocarbon receptor nuclear translocator-like ... ARNT 0.016 aryl hydrocarbon receptor nuclear translocator isofo... ARNT2 0.016 aryl hydrocarbon receptor nuclear translocator 2 [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.