Guide to the Human Genome
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Name: PROCR Sequence: fasta or formatted (238aa) NCBI GI: 34335272
Description:

endothelial protein C receptor precursor

Referenced in:

Centrosome

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         13           1
 C cysteine            2.5          6           1
 D aspartate           2.5          6           1
 E glutamate           5.0         12           1
 F phenylalanine       5.5         13           2
 G glycine             8.0         19           2
 H histidine           3.4          8           1
 I isoleucine          3.8          9           2
 K lysine              0.8          2           1
 L leucine            13.4         32           3
 M methionine          0.8          2           1
 N asparagine          2.5          6           1
 P proline             3.8          9           2
 Q glutamine           7.6         18           2
 R arginine            6.3         15           2
 S serine              8.0         19           2
 T threonine           8.0         19           2
 V valine              7.6         18           2
 W tryptophan          1.7          4           1
 Y tyrosine            3.4          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   endothelial protein C receptor precursor 
CD1D                  0.070   CD1D antigen precursor 
HLA-F                 0.043   major histocompatibility complex, class I, F isofor...
HLA-E                 0.035   major histocompatibility complex, class I, E precurs...
HLA-C                 0.033   major histocompatibility complex, class I, C precurs...
HLA-F                 0.026   major histocompatibility complex, class I, F isofor...
HLA-F                 0.026   major histocompatibility complex, class I, F isofor...
FCGRT                 0.022   Fc fragment of IgG, receptor, transporter, alpha [H...
FCGRT                 0.022   Fc fragment of IgG, receptor, transporter, alpha [Hom...
PKP4                  0.022   plakophilin 4 isoform b 
PKP4                  0.022   plakophilin 4 isoform a 
CD1C                  0.020   CD1C antigen precursor 
HLA-A                 0.017   major histocompatibility complex, class I, A precurs...
HLA-G                 0.017   major histocompatibility complex, class I, G precurso...
HLA-B                 0.015   major histocompatibility complex, class I, B precurs...
LOC652614             0.013   PREDICTED: similar to MHC class I antigen 
EMCN                  0.007   endomucin isoform 2 
EMCN                  0.007   endomucin isoform 1 
LOC100290337          0.007   PREDICTED: hypothetical protein XP_002347285 
DDB1                  0.007   damage-specific DNA binding protein 1 
PHLDA3                0.007   pleckstrin homology-like domain, family A, member 3 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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