Guide to the Human Genome
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Search of human proteins with 42516574

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|42516574 tripartite motif-containing 41 isoform 2 [Homo
sapiens]
         (518 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|42516574 tripartite motif-containing 41 isoform 2 [Homo sapiens]  1071   0.0  
gi|42516572 tripartite motif-containing 41 isoform 1 [Homo sapiens]  1006   0.0  
gi|14249412 tripartite motif-containing 52 [Homo sapiens]             344   1e-94
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]   227   2e-59
gi|21630277 tripartite motif-containing 11 [Homo sapiens]             215   9e-56
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]   214   1e-55
gi|5730009 ret finger protein [Homo sapiens]                          214   2e-55
gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens]    202   6e-52
gi|15208660 tripartite motif protein 21 [Homo sapiens]                190   3e-48
gi|37622899 ring finger protein 137 [Homo sapiens]                    186   3e-47
gi|112421127 tripartite motif-containing 58 [Homo sapiens]            180   2e-45
gi|68160935 tripartite motif-containing 17 isoform 2 [Homo sapiens]   177   2e-44
gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens]   177   2e-44
gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens]    177   2e-44
gi|157426898 tripartite motif-containing 10 isoform 1 [Homo sapi...   176   5e-44
gi|157426896 tripartite motif-containing 10 isoform 2 [Homo sapi...   176   5e-44
gi|22749269 ring finger protein 129 [Homo sapiens]                    176   6e-44
gi|157743261 tripartite motif-containing 75 [Homo sapiens]            168   1e-41
gi|5454014 tripartite motif-containing 38 [Homo sapiens]              158   1e-38
gi|198442878 tripartite motif-containing 17 isoform 3 [Homo sapi...   156   4e-38
gi|149193331 tripartite motif protein 15 [Homo sapiens]               154   1e-37
gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens]    152   7e-37
gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens]    152   7e-37
gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo sa...   149   5e-36
gi|4508005 tripartite motif-containing 26 [Homo sapiens]              141   1e-33
gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo s...   137   2e-32
gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo s...   133   3e-31
gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]      128   1e-29
gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]      128   1e-29
gi|51477690 tripartite motif-containing 6 and tripartite motif-c...   128   1e-29

>gi|42516574 tripartite motif-containing 41 isoform 2 [Homo sapiens]
          Length = 518

 Score = 1072 bits (2771), Expect = 0.0
 Identities = 518/518 (100%), Positives = 518/518 (100%)

Query: 1   MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELD 60
           MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELD
Sbjct: 1   MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELD 60

Query: 61  REEEEEDGEEEEVEAVGAGAGWDTPMRDEDYEGDMEEEVEEEEEGVFWTSGMSRSSWDNM 120
           REEEEEDGEEEEVEAVGAGAGWDTPMRDEDYEGDMEEEVEEEEEGVFWTSGMSRSSWDNM
Sbjct: 61  REEEEEDGEEEEVEAVGAGAGWDTPMRDEDYEGDMEEEVEEEEEGVFWTSGMSRSSWDNM 120

Query: 121 DYVWEEEDEEEDLDYYLGDMEEEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPPPPAPRRC 180
           DYVWEEEDEEEDLDYYLGDMEEEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPPPPAPRRC
Sbjct: 121 DYVWEEEDEEEDLDYYLGDMEEEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPPPPAPRRC 180

Query: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEV 240
           FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEV
Sbjct: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEV 240

Query: 241 DEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVT 300
           DEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVT
Sbjct: 241 DEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVT 300

Query: 301 ELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQL 360
           ELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQL
Sbjct: 301 ELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQL 360

Query: 361 SRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRK 420
           SRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRK
Sbjct: 361 SRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRK 420

Query: 421 MSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQG 480
           MSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQG
Sbjct: 421 MSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQG 480

Query: 481 FRSGRHYWEEPKEPSWPPAQPSLTYYVCPTDRPEFSFT 518
           FRSGRHYWEEPKEPSWPPAQPSLTYYVCPTDRPEFSFT
Sbjct: 481 FRSGRHYWEEPKEPSWPPAQPSLTYYVCPTDRPEFSFT 518


>gi|42516572 tripartite motif-containing 41 isoform 1 [Homo sapiens]
          Length = 630

 Score = 1006 bits (2601), Expect = 0.0
 Identities = 489/489 (100%), Positives = 489/489 (100%)

Query: 1   MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELD 60
           MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELD
Sbjct: 1   MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELD 60

Query: 61  REEEEEDGEEEEVEAVGAGAGWDTPMRDEDYEGDMEEEVEEEEEGVFWTSGMSRSSWDNM 120
           REEEEEDGEEEEVEAVGAGAGWDTPMRDEDYEGDMEEEVEEEEEGVFWTSGMSRSSWDNM
Sbjct: 61  REEEEEDGEEEEVEAVGAGAGWDTPMRDEDYEGDMEEEVEEEEEGVFWTSGMSRSSWDNM 120

Query: 121 DYVWEEEDEEEDLDYYLGDMEEEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPPPPAPRRC 180
           DYVWEEEDEEEDLDYYLGDMEEEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPPPPAPRRC
Sbjct: 121 DYVWEEEDEEEDLDYYLGDMEEEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPPPPAPRRC 180

Query: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEV 240
           FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEV
Sbjct: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEV 240

Query: 241 DEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVT 300
           DEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVT
Sbjct: 241 DEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVT 300

Query: 301 ELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQL 360
           ELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQL
Sbjct: 301 ELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQL 360

Query: 361 SRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRK 420
           SRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRK
Sbjct: 361 SRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRK 420

Query: 421 MSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQG 480
           MSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQG
Sbjct: 421 MSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQG 480

Query: 481 FRSGRHYWE 489
           FRSGRHYWE
Sbjct: 481 FRSGRHYWE 489


>gi|14249412 tripartite motif-containing 52 [Homo sapiens]
          Length = 297

 Score =  344 bits (883), Expect = 1e-94
 Identities = 178/277 (64%), Positives = 213/277 (76%), Gaps = 12/277 (4%)

Query: 1   MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELD 60
           MA  A TP+P+QTLQEEAVCAICLDYF DPVSI CGHNFCR CVTQLW  EDEED++E  
Sbjct: 1   MAGYATTPSPMQTLQEEAVCAICLDYFKDPVSISCGHNFCRGCVTQLWSKEDEEDQNE-- 58

Query: 61  REEEEEDGEEEEVEAVGAGAGWDTPMRDEDYEGDMEEEV-EEEEEGVFWTSGMSRSSWDN 119
             EE+E  EEE+ EAVGA  GWD  +R+  Y G+ +EE+ +++++   W      ++WDN
Sbjct: 59  --EEDEWEEEEDEEAVGAMDGWDGSIREVLYRGNADEELFQDQDDDELWLGDSGITNWDN 116

Query: 120 MDYVW--EEEDEEEDLDYYLGDMEEEDLRGEDEEDEE--EVLEEVEEEDLDP-VTPLPPP 174
           +DY+W  EEE+EEED DYYLG +   DLR +   +EE  E  +E E+E+L P + P P  
Sbjct: 117 VDYMWDEEEEEEEEDQDYYLGGLRP-DLRIDVYREEEILEAYDEDEDEELYPDIHPPPSL 175

Query: 175 PAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEAL 234
           P P + FTCPQCRKSF RRSFRPNLQLANMVQ+IRQM PTP RG+R  DQG+C KHQEAL
Sbjct: 176 PLPGQ-FTCPQCRKSFTRRSFRPNLQLANMVQIIRQMCPTPYRGNRSNDQGMCFKHQEAL 234

Query: 235 KLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYK 271
           KLFCEVD+EAICVVCRESRSHKQHSV+PLEEVVQEY+
Sbjct: 235 KLFCEVDKEAICVVCRESRSHKQHSVLPLEEVVQEYQ 271


>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
          Length = 488

 Score =  227 bits (578), Expect = 2e-59
 Identities = 123/312 (39%), Positives = 184/312 (58%), Gaps = 8/312 (2%)

Query: 179 RCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFC 238
           R F CP CRK+   RS RPN QL +MV++ +Q+        ++ D+ +CP+H EAL LFC
Sbjct: 62  RDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVK---RKIRDESLCPQHHEALSLFC 118

Query: 239 EVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERR 298
             D+EA+C++C  S +H+ H+VVPL++  QEYK KLQ  +EPL + L+ + + K+ EE++
Sbjct: 119 YEDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKK 178

Query: 299 VTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAA 358
             ELK  ++S    +  EF  L R L EEQ  L  RL E  +  L R    A+ L ++  
Sbjct: 179 PGELKRLVESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRR 238

Query: 359 QLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIV 418
            L+ L AE + +  Q G  +L+D+K T  +CE+V+       S +  +  S+       +
Sbjct: 239 DLAHLAAEVEGKCLQSGFEMLKDVKSTLEKCEKVKTMEVTSVSIELEKNFSNFPRQYFAL 298

Query: 419 RKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERR-QEVADHPKRFSADCCVLG 477
           RK+ +        D+TLDP+TAHP L+LS DR+ V+  E R +++ D P+RF+   CVL 
Sbjct: 299 RKILKQLI----ADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPRRFTFYPCVLA 354

Query: 478 AQGFRSGRHYWE 489
            +GF SGRHYWE
Sbjct: 355 TEGFTSGRHYWE 366



 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 23/47 (48%), Positives = 33/47 (70%)

Query: 2  AAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLW 48
          A+ A T   ++ LQ EA C++CL+Y  +PV I CGHNFC+ C+T+ W
Sbjct: 11 ASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWW 57


>gi|21630277 tripartite motif-containing 11 [Homo sapiens]
          Length = 468

 Score =  215 bits (547), Expect = 9e-56
 Identities = 122/316 (38%), Positives = 174/316 (55%), Gaps = 20/316 (6%)

Query: 177 PRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKL 236
           P   + CP+CR+  P+R+ RPN  LA M ++ R++HP          QG+CP H+E L  
Sbjct: 47  PEGPYACPECRELSPQRNLRPNRPLAKMAEMARRLHPPSP-----VPQGVCPAHREPLAA 101

Query: 237 FCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEE 296
           FC  +   +C  C  S  H  H V PL++  ++ KAKL+  +E LRK ++     +A+ +
Sbjct: 102 FCGDELRLLCAACERSGEHWAHRVRPLQDAAEDLKAKLEKSLEHLRKQMQDALLFQAQAD 161

Query: 297 RRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQ 356
                 +  ++S+   V  EF RL R LAEE+  L +RL E     L R    A+ L +Q
Sbjct: 162 ETCVLWQKMVESQRQNVLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQ 221

Query: 357 AAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPD---PCQPHSHDFL 413
           +A L+ L+AE + R Q   L LLQDIK+   R ++V+LQPPEV   +    C+       
Sbjct: 222 SAHLAELIAELEGRCQLPALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCR------- 274

Query: 414 TDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADC 473
              +V  + R      R D+TLDPDTA+P L+LS DRR V+  + RQ + D P+RF    
Sbjct: 275 VPGLVETLRRF-----RGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGP 329

Query: 474 CVLGAQGFRSGRHYWE 489
           CVLG + F SGRHYWE
Sbjct: 330 CVLGQERFTSGRHYWE 345



 Score = 69.3 bits (168), Expect = 8e-12
 Identities = 28/42 (66%), Positives = 31/42 (73%)

Query: 8  PNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWG 49
          P+    LQEEA CAICLDYFTDPV   CGHNFCR C+ + WG
Sbjct: 4  PDLSTNLQEEATCAICLDYFTDPVMTDCGHNFCRECIRRCWG 45


>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
          Length = 518

 Score =  214 bits (546), Expect = 1e-55
 Identities = 125/342 (36%), Positives = 185/342 (54%), Gaps = 38/342 (11%)

Query: 179 RCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFC 238
           R F CP CRK+   RS RPN QL +MV++ +Q+        ++ D+ +CP+H EAL LFC
Sbjct: 62  RDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVK---RKIRDESLCPQHHEALSLFC 118

Query: 239 EVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERR 298
             D+EA+C++C  S +H+ H+VVPL++  QEYK KLQ  +EPL + L+ + + K+ EE++
Sbjct: 119 YEDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKK 178

Query: 299 VTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAA 358
             ELK  ++S    +  EF  L R L EEQ  L  RL E  +  L R    A+ L ++  
Sbjct: 179 PGELKRLVESRRQQILREFEELHRRLDEEQQVLLSRLEEEEQDILQRLRENAAHLGDKRR 238

Query: 359 QLSRLLAEAQERSQQGGLRLLQDIKETF------------------------------NR 388
            L+ L AE + +  Q G  +L+D+K T                               NR
Sbjct: 239 DLAHLAAEVEGKCLQSGFEMLKDVKSTLEKNIPRKFGGSLSTICPRDHKALLGLVKEINR 298

Query: 389 CEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSP 448
           CE+V+       S +  +  S+       +RK+ +        D+TLDP+TAHP L+LS 
Sbjct: 299 CEKVKTMEVTSVSIELEKNFSNFPRQYFALRKILKQLI----ADVTLDPETAHPNLVLSE 354

Query: 449 DRRGVRLAERR-QEVADHPKRFSADCCVLGAQGFRSGRHYWE 489
           DR+ V+  E R +++ D P+RF+   CVL  +GF SGRHYWE
Sbjct: 355 DRKSVKFVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWE 396



 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 23/47 (48%), Positives = 33/47 (70%)

Query: 2  AAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLW 48
          A+ A T   ++ LQ EA C++CL+Y  +PV I CGHNFC+ C+T+ W
Sbjct: 11 ASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWW 57


>gi|5730009 ret finger protein [Homo sapiens]
          Length = 513

 Score =  214 bits (544), Expect = 2e-55
 Identities = 121/325 (37%), Positives = 189/325 (58%), Gaps = 19/325 (5%)

Query: 182 TCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEVD 241
           +CPQCR++FP+R  RPN  LAN+ Q+++Q+      G    + G+C KH+E LKL+CE D
Sbjct: 52  SCPQCRETFPQRHMRPNRHLANVTQLVKQLRTERPSGPG-GEMGVCEKHREPLKLYCEED 110

Query: 242 EEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTE 301
           +  ICVVC  SR H+ HSV+PLEE V+ +K ++Q  ++ L++  +  ++ +A+ E+   E
Sbjct: 111 QMPICVVCDRSREHRGHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAE 170

Query: 302 LKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLS 361
           L S  + E   +  EF +L   L E +  L  RL E+  A       A ++ +   + LS
Sbjct: 171 LLSLTQMEREKIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLS 230

Query: 362 RLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHD------FLTD 415
            L+A+ +E+ QQ    LLQDI +T +R E +++  P +  PD  Q   H       FLT+
Sbjct: 231 SLIAQLEEKQQQPTRELLQDIGDTLSRAERIRIPEPWITPPD-LQEKIHIFAQKCLFLTE 289

Query: 416 AIVRKMSRM-----------FCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVAD 464
           ++ +   +M             Q   VD+TLDPDTA+P+L+LS + R VR +  +Q++ D
Sbjct: 290 SLKQFTEKMQSDMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPD 349

Query: 465 HPKRFSADCCVLGAQGFRSGRHYWE 489
           +P+RF+   CVLG+  F +GRHYWE
Sbjct: 350 NPERFNLFPCVLGSPCFIAGRHYWE 374



 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 17/38 (44%), Positives = 25/38 (65%)

Query: 12 QTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWG 49
          + LQ+E  C +CL YF +P+ + CGHN C  C+ + WG
Sbjct: 8  ECLQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWG 45


>gi|44680122 tripartite motif-containing 7 isoform 1 [Homo sapiens]
          Length = 511

 Score =  202 bits (514), Expect = 6e-52
 Identities = 124/337 (36%), Positives = 180/337 (53%), Gaps = 21/337 (6%)

Query: 169 TPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMH---PTPGR-GSRVTDQ 224
           T  PP P P     CPQCR+       RPN QLA +  ++R+       PG  GS+    
Sbjct: 69  TRAPPFPLP-----CPQCREPARPSQLRPNRQLAAVATLLRRFSLPAAAPGEHGSQAAAA 123

Query: 225 GI----CPKHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEP 280
                 C +H E  KL+C+ D  AICVVC  +R H++H+V+PL+E VQE K  L+  +  
Sbjct: 124 RAAAARCGQHGEPFKLYCQDDGRAICVVCDRAREHREHAVLPLDEAVQEAKELLESRLRV 183

Query: 281 LRKHLEAVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHE 340
           L+K LE  +  ++ E++   EL  QM +E   V +EF  L  FL E++  L  RL E+  
Sbjct: 184 LKKELEDCEVFRSTEKKESKELLKQMAAEQEKVGAEFQALRAFLVEQEGRLLGRLEELSR 243

Query: 341 AQLGRAGAAASRLAEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVW 400
               +     ++L  +  QLS+L ++ QE +Q+  L  LQ+ K T +RC  V    P   
Sbjct: 244 EVAQKQNENLAQLGVEITQLSKLSSQIQETAQKPDLDFLQEFKSTLSRCSNVPGPKPTTV 303

Query: 401 SPDPCQPHSHDFLTDAIVRKMSRMFCQAAR--------VDLTLDPDTAHPALMLSPDRRG 452
           S +      +  L   +++ M + F +  R        V+LTLDPDTA+P L+LS D +G
Sbjct: 304 SSEMKNKVWNVSLKTFVLKGMLKKFKEDLRGELEKEEKVELTLDPDTANPRLILSLDLKG 363

Query: 453 VRLAERRQEVADHPKRFSADCCVLGAQGFRSGRHYWE 489
           VRL ER Q++ +HP RF  +  VL + GF SGRH+WE
Sbjct: 364 VRLGERAQDLPNHPCRFDTNTRVLASCGFSSGRHHWE 400



 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 20/35 (57%), Positives = 27/35 (77%)

Query: 14 LQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLW 48
          LQ EA C+ICL+ F +PVS+ CGH+FCR C+ + W
Sbjct: 23 LQGEATCSICLELFREPVSVECGHSFCRACIGRCW 57


>gi|15208660 tripartite motif protein 21 [Homo sapiens]
          Length = 475

 Score =  190 bits (482), Expect = 3e-48
 Identities = 110/307 (35%), Positives = 169/307 (55%), Gaps = 12/307 (3%)

Query: 183 CPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEVDE 242
           CP CR+ F  ++ RPN QLANMV  ++++      G   T    C  H E L LFCE D 
Sbjct: 51  CPVCRQRFLLKNLRPNRQLANMVNNLKEISQEAREG---TQGERCAVHGERLHLFCEKDG 107

Query: 243 EAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTEL 302
           +A+C VC +SR H+ H++VPLEE  QEY+ KLQ  +  LR+  E  +K++ +   +  + 
Sbjct: 108 KALCWVCAQSRKHRDHAMVPLEEAAQEYQEKLQVALGELRRKQELAEKLEVEIAIKRADW 167

Query: 303 KSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLSR 362
           K  ++++ + + +EF +   FL EE+    + L +    QL   G   ++LA+Q+  L  
Sbjct: 168 KKTVETQKSRIHAEFVQQKNFLVEEEQRQLQELEKDEREQLRILGEKEAKLAQQSQALQE 227

Query: 363 LLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRKMS 422
           L++E   R     L LLQ++     R E   L+  ++ SP        +  +   V  + 
Sbjct: 228 LISELDRRCHSSALELLQEVIIVLERSESWNLKDLDITSP--------ELRSVCHVPGLK 279

Query: 423 RMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQGFR 482
           +M  +   V +TLDPDTA+P L+LS DRR VRL + +Q +  + +RF +   VLGAQ F 
Sbjct: 280 KML-RTCAVHITLDPDTANPWLILSEDRRQVRLGDTQQSIPGNEERFDSYPMVLGAQHFH 338

Query: 483 SGRHYWE 489
           SG+HYWE
Sbjct: 339 SGKHYWE 345



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 20/35 (57%), Positives = 26/35 (74%)

Query: 16 EEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGG 50
          EE  C ICLD F +PVSI CGH+FC+ C++Q+  G
Sbjct: 12 EEVTCPICLDPFVEPVSIECGHSFCQECISQVGKG 46


>gi|37622899 ring finger protein 137 [Homo sapiens]
          Length = 485

 Score =  186 bits (473), Expect = 3e-47
 Identities = 117/324 (36%), Positives = 173/324 (53%), Gaps = 32/324 (9%)

Query: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEV 240
           +TCP CR     R+ RPN QLAN+V+ +R +   PG G +     +C +H E LK+FC+ 
Sbjct: 55  YTCPLCRAPVQPRNLRPNWQLANVVEKVRLLRLHPGMGLK---GDLCERHGEKLKMFCKE 111

Query: 241 DEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVT 300
           D   +C  C +S  H+ HSVVP+E+V  EYK +L   +E L+K  E   K++  E +R  
Sbjct: 112 DVLIMCEACSQSPEHEAHSVVPMEDVAWEYKWELHEALEHLKKEQEEAWKLEVGERKRTA 171

Query: 301 ELKSQMKSELAAVASEFGRLTRFLAEEQ--------------AGLERRLRE-MHEAQLGR 345
             K Q+++   ++  EF +  R L ++Q              A L+R   E M + +L  
Sbjct: 172 TWKIQVETRKQSIVWEFEKYQRLLEKKQPPHRQLGAEVAAALASLQREAAETMQKLELNH 231

Query: 346 AGAAASRLAEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPC 405
                S L +Q+  L R++AE +ERSQ+    +LQDI+E  NR +   LQ PE       
Sbjct: 232 -----SELIQQSQVLWRMIAELKERSQRPVRWMLQDIQEVLNRSKSWSLQQPE------- 279

Query: 406 QPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADH 465
            P S +  TD  V  + R   +    D+ LDPDTA+  L++S DR+ V   +  Q++ D+
Sbjct: 280 -PISLELKTDCRVLGL-REILKTYAADVRLDPDTAYSRLIVSEDRKRVHYGDTNQKLPDN 337

Query: 466 PKRFSADCCVLGAQGFRSGRHYWE 489
           P+RF     VLG+Q   SGRHYWE
Sbjct: 338 PERFYRYNIVLGSQCISSGRHYWE 361



 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 17/38 (44%), Positives = 26/38 (68%)

Query: 11 VQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLW 48
          V+ + EE  C IC+ +  +P+SI CGH+FC  C++ LW
Sbjct: 7  VEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLW 44


>gi|112421127 tripartite motif-containing 58 [Homo sapiens]
          Length = 486

 Score =  180 bits (457), Expect = 2e-45
 Identities = 111/310 (35%), Positives = 161/310 (51%), Gaps = 16/310 (5%)

Query: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEV 240
           + CPQCR  F    FRPN QLA +V+ +R++    G G+R      C +H E L  FCE 
Sbjct: 55  YACPQCRGPFRPSGFRPNRQLAGLVESVRRLGLGAGPGARR-----CARHGEDLSRFCEE 109

Query: 241 DEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVT 300
           DE A+C VC     H+ H   PL+E    Y+ KLQ  +E +RK LE     +A   ++  
Sbjct: 110 DEAALCWVCDAGPEHRTHRTAPLQEAAGSYQVKLQMALELMRKELEDALTQEANVGKKTV 169

Query: 301 ELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQL 360
             K +++ +      EF +   FLA+E+    RRL     A L R   + SRL +Q+  L
Sbjct: 170 IWKEKVEMQRQRFRLEFEKHRGFLAQEEQRQLRRLEAEERATLQRLRESKSRLVQQSKAL 229

Query: 361 SRLLAEAQERSQQGGLRLLQDIKETFNRCEEV-QLQPPEVWSPDPCQPHSHDFLTDAIVR 419
             L  E QER Q+  L LL+ ++   +R + V +L+   +    P +      L  A   
Sbjct: 230 KELADELQERCQRPALGLLEGVRGVLSRSKAVTRLEAENI----PME------LKTACCI 279

Query: 420 KMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQ 479
              R   +  +VD+ LDP TAHP+L+L+ D R V+  E  ++V ++P+RF    C+LG Q
Sbjct: 280 PGRRELLRKFQVDVKLDPATAHPSLLLTADLRSVQDGEPWRDVPNNPERFDTWPCILGLQ 339

Query: 480 GFRSGRHYWE 489
            F SGRHYWE
Sbjct: 340 SFSSGRHYWE 349



 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 14/112 (12%)

Query: 10  PVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEED-------------R 56
           P + L+E+A C +CLD+  +PVS+ CGH+FC  C+++     D                R
Sbjct: 6   PGERLREDARCPVCLDFLQEPVSVDCGHSFCLRCISEFCEKSDGAQGGVYACPQCRGPFR 65

Query: 57  DELDREEEEEDGEEEEVEAVGAGAGWDTPMRDEDYEGDMEEEVEEEEEGVFW 108
               R   +  G  E V  +G GAG     R   +  D+    EE+E  + W
Sbjct: 66  PSGFRPNRQLAGLVESVRRLGLGAG-PGARRCARHGEDLSRFCEEDEAALCW 116


>gi|68160935 tripartite motif-containing 17 isoform 2 [Homo sapiens]
          Length = 450

 Score =  177 bits (449), Expect = 2e-44
 Identities = 110/310 (35%), Positives = 165/310 (53%), Gaps = 16/310 (5%)

Query: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEV 240
           F CP+CR+  P+R+  PN  L  + ++ +Q HP       +  Q +C +H E LKLFC+ 
Sbjct: 33  FPCPECREMSPQRNLLPNRLLTKVAEMAQQ-HPG------LQKQDLCQEHHEPLKLFCQK 85

Query: 241 DEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVT 300
           D+  ICVVCRESR H+ H V+P EE VQ YK KL+  +E LR+ +     ++A+EE+ + 
Sbjct: 86  DQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLA 145

Query: 301 ELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQL 360
           E + ++K     +  EF ++  +L EE+  L + L    E    R   + + L  Q   L
Sbjct: 146 EWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSL 205

Query: 361 SRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRK 420
             LL + +ERS QG L++LQD+KE  +R   V +Q PEV    P +P +   +   I  +
Sbjct: 206 ELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEV--APPTRPRTVCRVPGQI--E 261

Query: 421 MSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPK-RFSADCCVLGAQ 479
           + R F +    D+  D  +A+P L+L   R+   L    +      K RF A  C +G  
Sbjct: 262 VLRGFLE----DVVPDATSAYPYLLLYESRQRRYLGSSPEGSGFCSKDRFVAYPCAVGQT 317

Query: 480 GFRSGRHYWE 489
            F SGRHYWE
Sbjct: 318 AFSSGRHYWE 327



 Score = 30.4 bits (67), Expect = 4.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)

Query: 35 CGHNFCRVCVTQLW 48
          CGHNFCR C+   W
Sbjct: 4  CGHNFCRACIQLSW 17


>gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens]
          Length = 477

 Score =  177 bits (449), Expect = 2e-44
 Identities = 110/310 (35%), Positives = 165/310 (53%), Gaps = 16/310 (5%)

Query: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEV 240
           F CP+CR+  P+R+  PN  L  + ++ +Q HP       +  Q +C +H E LKLFC+ 
Sbjct: 60  FPCPECREMSPQRNLLPNRLLTKVAEMAQQ-HPG------LQKQDLCQEHHEPLKLFCQK 112

Query: 241 DEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVT 300
           D+  ICVVCRESR H+ H V+P EE VQ YK KL+  +E LR+ +     ++A+EE+ + 
Sbjct: 113 DQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLA 172

Query: 301 ELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQL 360
           E + ++K     +  EF ++  +L EE+  L + L    E    R   + + L  Q   L
Sbjct: 173 EWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSL 232

Query: 361 SRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRK 420
             LL + +ERS QG L++LQD+KE  +R   V +Q PEV    P +P +   +   I  +
Sbjct: 233 ELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEV--APPTRPRTVCRVPGQI--E 288

Query: 421 MSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPK-RFSADCCVLGAQ 479
           + R F +    D+  D  +A+P L+L   R+   L    +      K RF A  C +G  
Sbjct: 289 VLRGFLE----DVVPDATSAYPYLLLYESRQRRYLGSSPEGSGFCSKDRFVAYPCAVGQT 344

Query: 480 GFRSGRHYWE 489
            F SGRHYWE
Sbjct: 345 AFSSGRHYWE 354



 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 25/35 (71%), Positives = 27/35 (77%)

Query: 14 LQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLW 48
          LQEEA C+ICLDYFTDPV   CGHNFCR C+   W
Sbjct: 10 LQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSW 44


>gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens]
          Length = 477

 Score =  177 bits (449), Expect = 2e-44
 Identities = 110/310 (35%), Positives = 165/310 (53%), Gaps = 16/310 (5%)

Query: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEV 240
           F CP+CR+  P+R+  PN  L  + ++ +Q HP       +  Q +C +H E LKLFC+ 
Sbjct: 60  FPCPECREMSPQRNLLPNRLLTKVAEMAQQ-HPG------LQKQDLCQEHHEPLKLFCQK 112

Query: 241 DEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVT 300
           D+  ICVVCRESR H+ H V+P EE VQ YK KL+  +E LR+ +     ++A+EE+ + 
Sbjct: 113 DQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLA 172

Query: 301 ELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQL 360
           E + ++K     +  EF ++  +L EE+  L + L    E    R   + + L  Q   L
Sbjct: 173 EWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSL 232

Query: 361 SRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRK 420
             LL + +ERS QG L++LQD+KE  +R   V +Q PEV    P +P +   +   I  +
Sbjct: 233 ELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEV--APPTRPRTVCRVPGQI--E 288

Query: 421 MSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPK-RFSADCCVLGAQ 479
           + R F +    D+  D  +A+P L+L   R+   L    +      K RF A  C +G  
Sbjct: 289 VLRGFLE----DVVPDATSAYPYLLLYESRQRRYLGSSPEGSGFCSKDRFVAYPCAVGQT 344

Query: 480 GFRSGRHYWE 489
            F SGRHYWE
Sbjct: 345 AFSSGRHYWE 354



 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 25/35 (71%), Positives = 27/35 (77%)

Query: 14 LQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLW 48
          LQEEA C+ICLDYFTDPV   CGHNFCR C+   W
Sbjct: 10 LQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSW 44


>gi|157426898 tripartite motif-containing 10 isoform 1 [Homo
           sapiens]
          Length = 481

 Score =  176 bits (446), Expect = 5e-44
 Identities = 105/324 (32%), Positives = 173/324 (53%), Gaps = 11/324 (3%)

Query: 173 PPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQE 232
           P P      TCP C++ F   SFRPN QLAN+V+ I ++      G  + ++ +C +H E
Sbjct: 47  PGPDLEESPTCPLCKEPFRPGSFRPNWQLANVVENIERLQLVSTLG--LGEEDVCQEHGE 104

Query: 233 ALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMK 292
            +  FCE DE  +CVVCRE+  H  H++  LE+    Y+ ++   ++ LRK  E +Q+++
Sbjct: 105 KIYFFCEDDEMQLCVVCREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQ 164

Query: 293 AKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASR 352
           ++E +R+  L +Q+ ++   V SEF  L +FL E+Q+ L  +L       L +       
Sbjct: 165 SRENKRMQVLLTQVSTKRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLL 224

Query: 353 LAEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDF 412
           +A +  + S L+ E +E++++    LL DI+ T  RCE  + + P   SP+  Q    DF
Sbjct: 225 VAGEICRFSALIEELEEKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQ-RIRDF 283

Query: 413 LTDAI-VRKMSRMFCQAARVDL-------TLDPDTAHPALMLSPDRRGVRLAERRQEVAD 464
              A+ +++  +MF +    +L       +LDP T+HP L+LS D +  + + + Q   D
Sbjct: 284 PQQALPLQREMKMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPD 343

Query: 465 HPKRFSADCCVLGAQGFRSGRHYW 488
           +P+RF    CVL   G   GRH W
Sbjct: 344 NPQRFDRATCVLAHTGITGGRHTW 367



 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 11 VQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQ 46
          V +L +E  C IC     +PV+I CGHNFCR C+T+
Sbjct: 7  VTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTR 42


>gi|157426896 tripartite motif-containing 10 isoform 2 [Homo
           sapiens]
          Length = 395

 Score =  176 bits (446), Expect = 5e-44
 Identities = 105/324 (32%), Positives = 173/324 (53%), Gaps = 11/324 (3%)

Query: 173 PPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQE 232
           P P      TCP C++ F   SFRPN QLAN+V+ I ++      G  + ++ +C +H E
Sbjct: 47  PGPDLEESPTCPLCKEPFRPGSFRPNWQLANVVENIERLQLVSTLG--LGEEDVCQEHGE 104

Query: 233 ALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMK 292
            +  FCE DE  +CVVCRE+  H  H++  LE+    Y+ ++   ++ LRK  E +Q+++
Sbjct: 105 KIYFFCEDDEMQLCVVCREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQ 164

Query: 293 AKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASR 352
           ++E +R+  L +Q+ ++   V SEF  L +FL E+Q+ L  +L       L +       
Sbjct: 165 SRENKRMQVLLTQVSTKRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLL 224

Query: 353 LAEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDF 412
           +A +  + S L+ E +E++++    LL DI+ T  RCE  + + P   SP+  Q    DF
Sbjct: 225 VAGEICRFSALIEELEEKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQ-RIRDF 283

Query: 413 LTDAI-VRKMSRMFCQAARVDL-------TLDPDTAHPALMLSPDRRGVRLAERRQEVAD 464
              A+ +++  +MF +    +L       +LDP T+HP L+LS D +  + + + Q   D
Sbjct: 284 PQQALPLQREMKMFLEKLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQFSYKWQNSPD 343

Query: 465 HPKRFSADCCVLGAQGFRSGRHYW 488
           +P+RF    CVL   G   GRH W
Sbjct: 344 NPQRFDRATCVLAHTGITGGRHTW 367



 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 11 VQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQ 46
          V +L +E  C IC     +PV+I CGHNFCR C+T+
Sbjct: 7  VTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTR 42


>gi|22749269 ring finger protein 129 [Homo sapiens]
          Length = 471

 Score =  176 bits (445), Expect = 6e-44
 Identities = 100/318 (31%), Positives = 169/318 (53%), Gaps = 8/318 (2%)

Query: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEV 240
           F CP CR  FP +SFR N QL N+ ++ +Q+     +  R  +  +C KH + L LFC  
Sbjct: 51  FPCPVCRFCFPYKSFRRNPQLRNLTEIAKQLQIRRSKRKRQKENAMCEKHNQFLTLFCVK 110

Query: 241 DEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVT 300
           D E +C  C  S  H++H + P+++    ++  L+G +EPLR ++E V+K+   +  +  
Sbjct: 111 DLEILCTQCSFSTKHQKHYICPIKKAASYHREILEGSLEPLRNNIERVEKVIILQGSKSV 170

Query: 301 ELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQL 360
           ELK +++ +   + SEF ++  FL  EQ  + R++++     L +       L++  + L
Sbjct: 171 ELKKKVEYKREEINSEFEQIRLFLQNEQEMILRQIQDEEMNILAKLNENLVELSDYVSTL 230

Query: 361 SRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRK 420
             LL E + +S Q  L LL   K   ++ +   L+ PE++S    +   + F        
Sbjct: 231 KHLLREVEGKSVQSNLELLTQAKSMHHKYQ--NLKCPELFS---FRLTKYGFSLPPQYSG 285

Query: 421 MSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQG 480
           + R+  +  +VD+ LD +TAHP L++S DR+ VR   +++ +   P+RF     VLG+Q 
Sbjct: 286 LDRII-KPFQVDVILDLNTAHPQLLVSEDRKAVRYERKKRNICYDPRRFYVCPAVLGSQR 344

Query: 481 FRSGRHYWEEP--KEPSW 496
           F SGRHYWE     +P W
Sbjct: 345 FSSGRHYWEVEVGNKPKW 362



 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 23/40 (57%), Positives = 29/40 (72%)

Query: 14 LQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDE 53
          LQEE+ C ICL+Y  DPV+I CGHNFCR C++  W   D+
Sbjct: 10 LQEESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDD 49


>gi|157743261 tripartite motif-containing 75 [Homo sapiens]
          Length = 468

 Score =  168 bits (425), Expect = 1e-41
 Identities = 94/313 (30%), Positives = 158/313 (50%), Gaps = 15/313 (4%)

Query: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEV 240
           F CP CR       FR N QL  M+++ + +  T     +  +  +C KH + L +FC+ 
Sbjct: 51  FPCPVCRHQCQEGHFRSNTQLGRMIEIAKLLQSTKSNKRKQEETTLCEKHNQPLSVFCKE 110

Query: 241 DEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVT 300
           D   +C +C +   H+ H V P+E+    Y+ +   +++PL+K L  +QK+ + + ++  
Sbjct: 111 DLMVLCPLCTQPPDHQGHHVRPIEKAAIHYRKRFCSYIQPLKKQLADLQKLISTQSKKPL 170

Query: 301 ELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQL 360
           EL+  ++++   ++SEF  L +FL  EQ  +  RL E  +    +  A  +  +  +A L
Sbjct: 171 ELREMVENQRQELSSEFEHLNQFLDREQQAVLSRLAEEEKDNQQKLSANITAFSNYSATL 230

Query: 361 SRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWS----PDPCQPHSHDFLTDA 416
              L++  E S+   L LL  IK  +   E      P ++S     D C           
Sbjct: 231 KSQLSKVVELSELSELELLSQIKIFY---ESENESSPSIFSIHLKRDGCSFPPQYSALQR 287

Query: 417 IVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVL 476
           I++K         +V++ LDP+TAHP L++S D++ VR  +R+Q+V   PKRF+    VL
Sbjct: 288 IIKKF--------KVEIILDPETAHPNLIVSEDKKRVRFTKRKQKVPGFPKRFTVKPVVL 339

Query: 477 GAQGFRSGRHYWE 489
           G   F SGRH+WE
Sbjct: 340 GFPYFHSGRHFWE 352



 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 24/35 (68%), Positives = 28/35 (80%)

Query: 14 LQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLW 48
          LQ EA C+ICLDY +DPV+I CGHNFCR C+ Q W
Sbjct: 10 LQAEAKCSICLDYLSDPVTIECGHNFCRSCIQQSW 44


>gi|5454014 tripartite motif-containing 38 [Homo sapiens]
          Length = 465

 Score =  158 bits (399), Expect = 1e-38
 Identities = 104/313 (33%), Positives = 160/313 (51%), Gaps = 23/313 (7%)

Query: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGI-CPKHQEALKLFCE 239
           F CPQCR  F   S RPN QL ++++ +++           TDQ + C +H E   LFCE
Sbjct: 57  FCCPQCRAPFHMDSLRPNKQLGSLIEALKE-----------TDQEMSCEEHGEQFHLFCE 105

Query: 240 VDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRV 299
            + + IC  C  +  HK H+   +E+V Q YK KLQ  V  L++  +   + K     R+
Sbjct: 106 DEGQLICWRCERAPQHKGHTTALVEDVCQGYKEKLQKAVTKLKQLEDRCTEQKLSTAMRI 165

Query: 300 TELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQ 359
           T+ K +++ +   + S+F  L  FL EE+     RL +  +  L R     + L  ++ +
Sbjct: 166 TKWKEKVQIQRQKIRSDFKNLQCFLHEEEKSYLWRLEKEEQQTLSRLRDYEAGLGLKSNE 225

Query: 360 LSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPD---PCQPHSHDFLTDA 416
           L   + E +E+ Q    +LLQ++ +T +R   V+L+  E  S +    C      F    
Sbjct: 226 LKSHILELEEKCQGSAQKLLQNVNDTLSRSWAVKLETSEAVSLELHTMCNVSKLYF---- 281

Query: 417 IVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVL 476
            V+KM R    + +V +TLDPDTAH  L+LS DRR V     ++      +RF+A  CVL
Sbjct: 282 DVKKMLR----SHQVSVTLDPDTAHHELILSEDRRQVTRGYTQENQDTSSRRFTAFPCVL 337

Query: 477 GAQGFRSGRHYWE 489
           G +GF SGR Y+E
Sbjct: 338 GCEGFTSGRRYFE 350



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 18/35 (51%), Positives = 26/35 (74%)

Query: 14 LQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLW 48
          + EEA C+ICL   T+PVSI CGH++C +C+T  +
Sbjct: 10 MMEEATCSICLSLMTNPVSINCGHSYCHLCITDFF 44


>gi|198442878 tripartite motif-containing 17 isoform 3 [Homo
           sapiens]
          Length = 343

 Score =  156 bits (395), Expect = 4e-38
 Identities = 84/222 (37%), Positives = 126/222 (56%), Gaps = 7/222 (3%)

Query: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEV 240
           F CP+CR+  P+R+  PN  L  + ++ +Q HP       +  Q +C +H E LKLFC+ 
Sbjct: 60  FPCPECREMSPQRNLLPNRLLTKVAEMAQQ-HPG------LQKQDLCQEHHEPLKLFCQK 112

Query: 241 DEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVT 300
           D+  ICVVCRESR H+ H V+P EE VQ YK KL+  +E LR+ +     ++A+EE+ + 
Sbjct: 113 DQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLA 172

Query: 301 ELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQL 360
           E + ++K     +  EF ++  +L EE+  L + L    E    R   + + L  Q   L
Sbjct: 173 EWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSL 232

Query: 361 SRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSP 402
             LL + +ERS QG L++LQD+KE  +R   V +Q PEV  P
Sbjct: 233 ELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPP 274



 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 25/35 (71%), Positives = 27/35 (77%)

Query: 14 LQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLW 48
          LQEEA C+ICLDYFTDPV   CGHNFCR C+   W
Sbjct: 10 LQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSW 44


>gi|149193331 tripartite motif protein 15 [Homo sapiens]
          Length = 465

 Score =  154 bits (390), Expect = 1e-37
 Identities = 87/270 (32%), Positives = 144/270 (53%), Gaps = 7/270 (2%)

Query: 227 CPKHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLE 286
           C +H E +  FCE D E +CV CRE  +H+ H+V  L+E +Q Y+ +L+  +E L    +
Sbjct: 83  CEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFLDEAIQPYRDRLRSRLEALSTERD 142

Query: 287 AVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRA 346
            ++ +K +E++++  L +Q++S+   V + F RL + L +++  L  RLRE+ +      
Sbjct: 143 EIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKER 202

Query: 347 GAAASRLAEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQ 406
               ++++E+  +L   + E +E+ QQ    LLQD++   +RCE      PE  SPD  +
Sbjct: 203 DEYITKVSEEVTRLGAQVKELEEKCQQPASELLQDVRVNQSRCEMKTFVSPEAISPDLVK 262

Query: 407 P----HSHDFLTDAIVRKMSRMFCQAARVD---LTLDPDTAHPALMLSPDRRGVRLAERR 459
                H        ++R  S        +D   +TLDP TA  +L+LS DR+ VR   ++
Sbjct: 263 KIRDFHRKILTLPEMMRMFSENLAHHLEIDSGVITLDPQTASRSLVLSEDRKSVRYTRQK 322

Query: 460 QEVADHPKRFSADCCVLGAQGFRSGRHYWE 489
           + + D P RF     VLG  GF SGRH W+
Sbjct: 323 KSLPDSPLRFDGLPAVLGFPGFSSGRHRWQ 352



 Score = 38.1 bits (87), Expect = 0.020
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 7  TPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQL 47
          TP+ ++ + E   C +C     D V+I CGH FCR+C+  L
Sbjct: 4  TPS-LKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPAL 43


>gi|18079262 tripartite motif-containing 6 isoform 2 [Homo sapiens]
          Length = 488

 Score =  152 bits (384), Expect = 7e-37
 Identities = 100/322 (31%), Positives = 165/322 (51%), Gaps = 16/322 (4%)

Query: 182 TCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEVD 241
           +CP C+ S+   + RPN  LAN+V+ +R++   PG+  +     +C  H E L+LFC+ D
Sbjct: 55  SCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAV---LCADHGEKLQLFCQED 111

Query: 242 EEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTE 301
            + IC +C  S+ H+ H    +EEV QEY+ K Q  ++ L+   +  +K+ A    + T 
Sbjct: 112 GKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTS 171

Query: 302 LKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLS 361
            K+QM+ E   + +EF +L   L   +    ++L +  +  L     A + L  Q   L 
Sbjct: 172 WKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLR 231

Query: 362 RLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRKM 421
            L+++ + R Q   + LLQD+ +   R E   L+ PE     P +  S     D  +++M
Sbjct: 232 ELISDLERRCQGSTMELLQDVSDVTERSEFWTLRKPEAL---PTKLRSMFRAPD--LKRM 286

Query: 422 SRMF-----CQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVL 476
            R+       Q+  VD+TL+P TA+  L+L+ +RR VR    +       ++   DC VL
Sbjct: 287 LRVCRELTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEK-HYDCSVL 345

Query: 477 GAQGFRSGRHYWE--EPKEPSW 496
           G+Q F SG+HYWE    K+ +W
Sbjct: 346 GSQHFSSGKHYWEVDVAKKTAW 367



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 19/40 (47%), Positives = 28/40 (70%)

Query: 6  MTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVT 45
          MT   +  ++EE  C ICL+  T+P+SI CGH+FC+ C+T
Sbjct: 1  MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACIT 40


>gi|51477692 tripartite motif-containing 6 isoform 1 [Homo sapiens]
          Length = 516

 Score =  152 bits (384), Expect = 7e-37
 Identities = 100/322 (31%), Positives = 165/322 (51%), Gaps = 16/322 (4%)

Query: 182 TCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEVD 241
           +CP C+ S+   + RPN  LAN+V+ +R++   PG+  +     +C  H E L+LFC+ D
Sbjct: 83  SCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAV---LCADHGEKLQLFCQED 139

Query: 242 EEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTE 301
            + IC +C  S+ H+ H    +EEV QEY+ K Q  ++ L+   +  +K+ A    + T 
Sbjct: 140 GKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTS 199

Query: 302 LKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLS 361
            K+QM+ E   + +EF +L   L   +    ++L +  +  L     A + L  Q   L 
Sbjct: 200 WKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLR 259

Query: 362 RLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRKM 421
            L+++ + R Q   + LLQD+ +   R E   L+ PE     P +  S     D  +++M
Sbjct: 260 ELISDLERRCQGSTMELLQDVSDVTERSEFWTLRKPEAL---PTKLRSMFRAPD--LKRM 314

Query: 422 SRMF-----CQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVL 476
            R+       Q+  VD+TL+P TA+  L+L+ +RR VR    +       ++   DC VL
Sbjct: 315 LRVCRELTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEK-HYDCSVL 373

Query: 477 GAQGFRSGRHYWE--EPKEPSW 496
           G+Q F SG+HYWE    K+ +W
Sbjct: 374 GSQHFSSGKHYWEVDVAKKTAW 395



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 19/40 (47%), Positives = 28/40 (70%)

Query: 6  MTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVT 45
          MT   +  ++EE  C ICL+  T+P+SI CGH+FC+ C+T
Sbjct: 29 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACIT 68


>gi|15011941 tripartite motif protein TRIM4 isoform beta [Homo
           sapiens]
          Length = 474

 Score =  149 bits (377), Expect = 5e-36
 Identities = 100/331 (30%), Positives = 157/331 (47%), Gaps = 42/331 (12%)

Query: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVI--RQMHPTPGRGSRVTDQGICPKHQEALKLFC 238
           F CP+CR      + RPN  LA + +    R++ P P         G+C +H E L+LFC
Sbjct: 47  FPCPECRHPSAPAALRPNWALARLTEKTQRRRLGPVP--------PGLCGRHWEPLRLFC 98

Query: 239 EVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERR 298
           E D+  +C+VCRES+ H+ H++ P++E  + Y+ KL      L   ++ V  ++  E + 
Sbjct: 99  EDDQRPVCLVCRESQEHQTHAMAPIDEAFESYREKLLKSQRNLVAKMKKVMHLQDVEVKN 158

Query: 299 VTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAA 358
            T+ K ++KS+   +++EF +L  FL EE+    +RL +  E    +      +L +  A
Sbjct: 159 ATQWKDKIKSQRMRISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIA 218

Query: 359 QLSRLLAEAQERSQQGGLRLLQDIKETFNRCE--EVQLQPPEVWSPDPCQPHSHDFLTDA 416
            L +L+ E  E+SQ   L LLQ+ KE   R E  +V      V     CQ          
Sbjct: 219 SLKKLILEVGEKSQAPTLELLQNPKEVLTRSEIQDVNYSLEAVKVKTVCQ--------IP 270

Query: 417 IVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVR------------------LAER 458
           ++++M + F    +V + L  DTAHP L+ S + R V+                     R
Sbjct: 271 LMKEMLKRF----QVAVNLAEDTAHPKLVFSQEGRYVKNTASASSWPVFSSAWNYFAGWR 326

Query: 459 RQEVADHPKRFSADCCVLGAQGFRSGRHYWE 489
             +     +RF    CVLG   F SG+HYWE
Sbjct: 327 NPQKTAFVERFQHLPCVLGKNVFTSGKHYWE 357



 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 24/37 (64%), Positives = 28/37 (75%)

Query: 12 QTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLW 48
          + +QEE  C ICLDYF DPVSI CGHNFCR C+ + W
Sbjct: 4  EDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNW 40


>gi|4508005 tripartite motif-containing 26 [Homo sapiens]
          Length = 539

 Score =  141 bits (356), Expect = 1e-33
 Identities = 93/332 (28%), Positives = 166/332 (50%), Gaps = 23/332 (6%)

Query: 183 CPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRG-SRVT----DQGICPKHQEALKLF 237
           CP C+K F + + RP  QLA++V+ I ++    GR    VT    D  +C +H+E L  +
Sbjct: 53  CPLCKKPFKKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKLHYY 112

Query: 238 CEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEER 297
           CE D + +CV+CRESR H+ H+ V +E+  Q ++ K+  H+  LR+  + +Q  +AK E 
Sbjct: 113 CEDDGKLLCVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDRDKIQGFQAKGEA 172

Query: 298 RVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQA 357
            +     +++ +   + +EF +  +FL E +  L  +L ++ +          SR   + 
Sbjct: 173 DILAALKKLQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELTEGREKFKSRGVGEL 232

Query: 358 AQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDP----CQPHSHDFL 413
           A+L+ +++E + ++QQ    L+QD ++  NR         + W   P     +  + +F 
Sbjct: 233 ARLALVISELEGKAQQPAAELMQDTRDFLNRYPR-----KKFWVGKPIARVVKKKTGEFS 287

Query: 414 TDAI-VRKMSRMF-------CQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADH 465
              + +++  R F        +   V +TLDP +A   L LS D + V      +    H
Sbjct: 288 DKLLSLQRGLREFQGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKCVTYTSLYKSAYLH 347

Query: 466 PKRFSADCCVLGAQGFRSGRHYWE-EPKEPSW 496
           P++F  +  VLG++GF  G+ YWE E +   W
Sbjct: 348 PQQFDCEPGVLGSKGFTWGKVYWEVEVEREGW 379



 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 23/41 (56%), Positives = 30/41 (73%)

Query: 7  TPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQL 47
          T  P+++L+EE  C+ICLDY  DPV+I CGH FCR C T +
Sbjct: 3  TSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDV 43



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 36/70 (51%), Positives = 41/70 (58%), Gaps = 9/70 (12%)

Query: 51  EDEEDRDELDREEEEEDGEEEEVEAVGAGAGWDTPMRDEDYE--GDMEEEVEEEEEGVFW 108
           EDEE+ DE     EEE  EEEE E  G G G+D    DED E  GD EEE EEEEE V  
Sbjct: 381 EDEEEGDE-----EEEGEEEEEEEEAGYGDGYDDWETDEDEESLGDEEEEEEEEEEEVLE 435

Query: 109 TS--GMSRSS 116
           +   G++R S
Sbjct: 436 SCMVGVARDS 445



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 27/87 (31%)

Query: 82  WDTPMRDEDYEGDMEEEVEEEEEGVFWTSGMSRSSWDNMDYVWEEEDEEEDLDYYLG--- 138
           W+  +  E +  D EEE +EEEEG                   EEE+EEE+  Y  G   
Sbjct: 370 WEVEVEREGWSED-EEEGDEEEEG-------------------EEEEEEEEAGYGDGYDD 409

Query: 139 ---DMEEEDLRGEDEEDEEEVLEEVEE 162
              D +EE L G++EE+EEE  EEV E
Sbjct: 410 WETDEDEESL-GDEEEEEEEEEEEVLE 435



 Score = 38.1 bits (87), Expect = 0.020
 Identities = 32/78 (41%), Positives = 39/78 (50%), Gaps = 20/78 (25%)

Query: 81  GWDTPMRDEDYEGDMEEEVEEEEEGVFWTSGMSRSSWDNMDYVWEEEDEEEDLDYYLGDM 140
           GW     +++ EGD EEE EEEEE      G     W+       +EDEE      LGD 
Sbjct: 378 GWS----EDEEEGDEEEEGEEEEEEEEAGYGDGYDDWET------DEDEES-----LGDE 422

Query: 141 EEEDLRGEDEEDEEEVLE 158
           EEE+      E+EEEVLE
Sbjct: 423 EEEE-E----EEEEEVLE 435



 Score = 34.3 bits (77), Expect = 0.28
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 15/84 (17%)

Query: 51  EDEEDRDEL-DREEEEEDGEEEEVEAVGAGAGWDTPMRDEDYEGDMEEEVEEEEEGVFWT 109
           E +ED + L D EEEEE+ EEE +E+   G   D+  R    +GD+       E+GV W 
Sbjct: 411 ETDEDEESLGDEEEEEEEEEEEVLESCMVGVARDSVKR----KGDLS---LRPEDGV-WA 462

Query: 110 SGMSRSSWDNMDYVWEEEDEEEDL 133
             +S S       +W     E +L
Sbjct: 463 LRLSSSG------IWANTSPEAEL 480


>gi|14670266 tripartite motif protein TRIM4 isoform alpha [Homo
           sapiens]
          Length = 500

 Score =  137 bits (345), Expect = 2e-32
 Identities = 103/357 (28%), Positives = 159/357 (44%), Gaps = 68/357 (19%)

Query: 181 FTCPQCRKSFPRRSFRPNLQLANMVQVI--RQMHPTPGRGSRVTDQGICPKHQEALKLFC 238
           F CP+CR      + RPN  LA + +    R++ P P         G+C +H E L+LFC
Sbjct: 47  FPCPECRHPSAPAALRPNWALARLTEKTQRRRLGPVP--------PGLCGRHWEPLRLFC 98

Query: 239 EVDEEAICVVCRESRSHKQHSVVPLEEVVQEYK-AKLQGHVEPLRKHL------------ 285
           E D+  +C+VCRES+ H+ H++ P++E  + Y+      HV+  ++ L            
Sbjct: 99  EDDQRPVCLVCRESQEHQTHAMAPIDEAFESYRTGNFDIHVDEWKRRLIRLLLYHSKQEE 158

Query: 286 -------EAVQKMKA------KEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLE 332
                    V KMK        E +  T+ K ++KS+   +++EF +L  FL EE+    
Sbjct: 159 KLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIKSQRMRISTEFSKLHNFLVEEEDLFL 218

Query: 333 RRLREMHEAQLGRAGAAASRLAEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCE-- 390
           +RL +  E    +      +L +  A L +L+ E  E+SQ   L LLQ+ KE   R E  
Sbjct: 219 QRLNKEEEETKKKLNENTLKLNQTIASLKKLILEVGEKSQAPTLELLQNPKEVLTRSEIQ 278

Query: 391 EVQLQPPEVWSPDPCQPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDR 450
           +V      V     CQ          ++++M + F    +V + L  DTAHP L+ S + 
Sbjct: 279 DVNYSLEAVKVKTVCQ--------IPLMKEMLKRF----QVAVNLAEDTAHPKLVFSQEG 326

Query: 451 RGVR------------------LAERRQEVADHPKRFSADCCVLGAQGFRSGRHYWE 489
           R V+                     R  +     +RF    CVLG   F SG+HYWE
Sbjct: 327 RYVKNTASASSWPVFSSAWNYFAGWRNPQKTAFVERFQHLPCVLGKNVFTSGKHYWE 383



 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 24/37 (64%), Positives = 28/37 (75%)

Query: 12 QTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLW 48
          + +QEE  C ICLDYF DPVSI CGHNFCR C+ + W
Sbjct: 4  EDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNW 40


>gi|14719418 tripartite motif protein TRIM5 isoform alpha [Homo
           sapiens]
          Length = 493

 Score =  133 bits (335), Expect = 3e-31
 Identities = 92/325 (28%), Positives = 160/325 (49%), Gaps = 17/325 (5%)

Query: 182 TCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEVD 241
           +CP CR S+   + RPN  +AN+V+ +R++  +P  G +V     C +H E L LFC+ D
Sbjct: 54  SCPVCRISYQPENIRPNRHVANLVEKLREVKLSP-EGQKVDH---CARHGEKLLLFCQED 109

Query: 242 EEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTE 301
            + IC +C  S+ H+ H   P EEV QEY+ KLQ  +E LR+  +  ++++A        
Sbjct: 110 GKVICWLCERSQEHRGHHTFPTEEVAQEYQVKLQAALEMLRQKQQEAEELEADIREEKAS 169

Query: 302 LKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLS 361
            K+Q++ +   V ++F +L   L  E++   + L +  E  L     + + + +Q   L 
Sbjct: 170 WKTQIQYDKTNVLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLR 229

Query: 362 RLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRKM 421
            L+++ + R Q   + LLQ +     R E V L+ PE +  +  +      L   +  ++
Sbjct: 230 ELISDLEHRLQGSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGML--EV 287

Query: 422 SRMFCQAAR--VDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSA----DCC- 474
            R      R  VD+T+ P+    A ++S D+R V   + +        R+      + C 
Sbjct: 288 FRELTDVRRYWVDVTVAPNNISCA-VISEDKRQVSSPKPQIIYGARGTRYQTFVNFNYCT 346

Query: 475 -VLGAQGFRSGRHYWE--EPKEPSW 496
            +LG+Q   SG+HYWE    K+ +W
Sbjct: 347 GILGSQSITSGKHYWEVDVSKKTAW 371



 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 16/32 (50%), Positives = 24/32 (75%)

Query: 14 LQEEAVCAICLDYFTDPVSIGCGHNFCRVCVT 45
          ++EE  C ICL+  T P+S+ CGH+FC+ C+T
Sbjct: 9  VKEEVTCPICLELLTQPLSLDCGHSFCQACLT 40


>gi|51477687 tripartite motif protein 34 isoform 1 [Homo sapiens]
          Length = 488

 Score =  128 bits (322), Expect = 1e-29
 Identities = 96/323 (29%), Positives = 160/323 (49%), Gaps = 24/323 (7%)

Query: 182 TCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEVD 241
           +CP C  S+     + N  LAN+V+ ++++  +P  G +   + +C  H E L LFC+ D
Sbjct: 55  SCPVCGISYSFEHLQANQHLANIVERLKEVKLSPDNGKK---RDLCDHHGEKLLLFCKED 111

Query: 242 EEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTE 301
            + IC +C  S+ H+ H  V  EEV +E + KLQ  ++ L+K  E  +K++A      T 
Sbjct: 112 RKVICWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTS 171

Query: 302 LKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLS 361
            K Q+++E   + +EF +L   L  E+    +RL E  +  L +   A   L +Q   + 
Sbjct: 172 WKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVR 231

Query: 362 RLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPD-PCQPHSHDFLTDAIVRK 420
            L+++ + RSQ   + LLQD+       E  +L+ P++ S       H+ D      + +
Sbjct: 232 ELISDVECRSQWSTMELLQDMSGIMKWSEIWRLKKPKMVSKKLKTVFHAPD------LSR 285

Query: 421 MSRMFCQAAR-----VDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCV 475
           M +MF +        VD+TL+    +  L+LS D+R V        V   P +   +  V
Sbjct: 286 MLQMFRELTAVRCYWVDVTLNSVNLNLNLVLSEDQRQV------ISVPIWPFQ-CYNYGV 338

Query: 476 LGAQGFRSGRHYWE--EPKEPSW 496
           LG+Q F SG+HYWE    K+ +W
Sbjct: 339 LGSQYFSSGKHYWEVDVSKKTAW 361



 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 17/32 (53%), Positives = 24/32 (75%)

Query: 14 LQEEAVCAICLDYFTDPVSIGCGHNFCRVCVT 45
          +QEE  C ICL+  T+P+S+ CGH+ CR C+T
Sbjct: 9  VQEEVTCPICLELLTEPLSLDCGHSLCRACIT 40


>gi|18087807 tripartite motif protein 34 isoform 1 [Homo sapiens]
          Length = 488

 Score =  128 bits (322), Expect = 1e-29
 Identities = 96/323 (29%), Positives = 160/323 (49%), Gaps = 24/323 (7%)

Query: 182 TCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEVD 241
           +CP C  S+     + N  LAN+V+ ++++  +P  G +   + +C  H E L LFC+ D
Sbjct: 55  SCPVCGISYSFEHLQANQHLANIVERLKEVKLSPDNGKK---RDLCDHHGEKLLLFCKED 111

Query: 242 EEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTE 301
            + IC +C  S+ H+ H  V  EEV +E + KLQ  ++ L+K  E  +K++A      T 
Sbjct: 112 RKVICWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTS 171

Query: 302 LKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLS 361
            K Q+++E   + +EF +L   L  E+    +RL E  +  L +   A   L +Q   + 
Sbjct: 172 WKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVR 231

Query: 362 RLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPD-PCQPHSHDFLTDAIVRK 420
            L+++ + RSQ   + LLQD+       E  +L+ P++ S       H+ D      + +
Sbjct: 232 ELISDVECRSQWSTMELLQDMSGIMKWSEIWRLKKPKMVSKKLKTVFHAPD------LSR 285

Query: 421 MSRMFCQAAR-----VDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCV 475
           M +MF +        VD+TL+    +  L+LS D+R V        V   P +   +  V
Sbjct: 286 MLQMFRELTAVRCYWVDVTLNSVNLNLNLVLSEDQRQV------ISVPIWPFQ-CYNYGV 338

Query: 476 LGAQGFRSGRHYWE--EPKEPSW 496
           LG+Q F SG+HYWE    K+ +W
Sbjct: 339 LGSQYFSSGKHYWEVDVSKKTAW 361



 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 17/32 (53%), Positives = 24/32 (75%)

Query: 14 LQEEAVCAICLDYFTDPVSIGCGHNFCRVCVT 45
          +QEE  C ICL+  T+P+S+ CGH+ CR C+T
Sbjct: 9  VQEEVTCPICLELLTEPLSLDCGHSLCRACIT 40


>gi|51477690 tripartite motif-containing 6 and tripartite
           motif-containing 34 [Homo sapiens]
          Length = 842

 Score =  128 bits (322), Expect = 1e-29
 Identities = 96/323 (29%), Positives = 160/323 (49%), Gaps = 24/323 (7%)

Query: 182 TCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEVD 241
           +CP C  S+     + N  LAN+V+ ++++  +P  G +   + +C  H E L LFC+ D
Sbjct: 409 SCPVCGISYSFEHLQANQHLANIVERLKEVKLSPDNGKK---RDLCDHHGEKLLLFCKED 465

Query: 242 EEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTE 301
            + IC +C  S+ H+ H  V  EEV +E + KLQ  ++ L+K  E  +K++A      T 
Sbjct: 466 RKVICWLCERSQEHRGHHTVLTEEVFKECQEKLQAVLKRLKKEEEEAEKLEADIREEKTS 525

Query: 302 LKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLS 361
            K Q+++E   + +EF +L   L  E+    +RL E  +  L +   A   L +Q   + 
Sbjct: 526 WKYQVQTERQRIQTEFDQLRSILNNEEQRELQRLEEEEKKTLDKFAEAEDELVQQKQLVR 585

Query: 362 RLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPD-PCQPHSHDFLTDAIVRK 420
            L+++ + RSQ   + LLQD+       E  +L+ P++ S       H+ D      + +
Sbjct: 586 ELISDVECRSQWSTMELLQDMSGIMKWSEIWRLKKPKMVSKKLKTVFHAPD------LSR 639

Query: 421 MSRMFCQAAR-----VDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCV 475
           M +MF +        VD+TL+    +  L+LS D+R V        V   P +   +  V
Sbjct: 640 MLQMFRELTAVRCYWVDVTLNSVNLNLNLVLSEDQRQV------ISVPIWPFQ-CYNYGV 692

Query: 476 LGAQGFRSGRHYWE--EPKEPSW 496
           LG+Q F SG+HYWE    K+ +W
Sbjct: 693 LGSQYFSSGKHYWEVDVSKKTAW 715



 Score =  119 bits (298), Expect = 7e-27
 Identities = 66/217 (30%), Positives = 112/217 (51%), Gaps = 3/217 (1%)

Query: 182 TCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEVD 241
           +CP C+ S+   + RPN  LAN+V+ +R++   PG+  +     +C  H E L+LFC+ D
Sbjct: 83  SCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAV---LCADHGEKLQLFCQED 139

Query: 242 EEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTE 301
            + IC +C  S+ H+ H    +EEV QEY+ K Q  ++ L+   +  +K+ A    + T 
Sbjct: 140 GKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTS 199

Query: 302 LKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLAEQAAQLS 361
            K+QM+ E   + +EF +L   L   +    ++L +  +  L     A + L  Q   L 
Sbjct: 200 WKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLR 259

Query: 362 RLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPE 398
            L+++ + R Q   + LLQD+ +   R E   L+ PE
Sbjct: 260 ELISDLERRCQGSTMELLQDVSDVTERSEFWTLRKPE 296



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 19/40 (47%), Positives = 28/40 (70%)

Query: 6  MTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVT 45
          MT   +  ++EE  C ICL+  T+P+SI CGH+FC+ C+T
Sbjct: 29 MTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACIT 68



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 5   AMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVT 45
           AM    +  +QEE  C ICL+  T+P+S+ CGH+ CR C+T
Sbjct: 354 AMASKILLNVQEEVTCPICLELLTEPLSLDCGHSLCRACIT 394


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.132    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,221,741
Number of Sequences: 37866
Number of extensions: 1388226
Number of successful extensions: 32806
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 679
Number of HSP's that attempted gapping in prelim test: 14104
Number of HSP's gapped (non-prelim): 8959
length of query: 518
length of database: 18,247,518
effective HSP length: 107
effective length of query: 411
effective length of database: 14,195,856
effective search space: 5834496816
effective search space used: 5834496816
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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