TRIM6 31891

Name: TRIM6	Sequence: fasta or formatted (516aa)		NCBI GI: 51477692
Description: tripartite motif-containing 6 isoform 1		Referenced in: Tripartite Motif Family
Other entries for this name: alt prot [488aa] tripartite motif-containing 6 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 23 1 C cysteine 4.1 21 1 D aspartate 3.1 16 1 E glutamate 9.1 47 2 F phenylalanine 3.7 19 1 G glycine 5.2 27 1 H histidine 3.1 16 2 I isoleucine 3.9 20 2 K lysine 5.0 26 2 L leucine 10.1 52 3 M methionine 1.6 8 1 N asparagine 4.3 22 1 P proline 4.8 25 2 Q glutamine 5.8 30 1 R arginine 7.8 40 2 S serine 7.2 37 2 T threonine 5.2 27 2 V valine 7.2 37 2 W tryptophan 1.4 7 1 Y tyrosine 3.1 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 6 isoform 1 TRIM6 0.949 tripartite motif-containing 6 isoform 2 TRIM6-TRIM34 0.616 tripartite motif-containing 6 and tripartite motif-c... TRIM34 0.518 tripartite motif protein 34 isoform 1 TRIM34 0.518 tripartite motif protein 34 isoform 1 TRIM22 0.502 tripartite motif-containing 22 TRIM5 0.487 tripartite motif protein TRIM5 isoform alpha TRIM21 0.361 tripartite motif protein 21 TRIM5 0.345 tripartite motif protein TRIM5 isoform delta TRIM5 0.345 tripartite motif protein TRIM5 isoform gamma TRIM68 0.305 ring finger protein 137 TRIM34 0.292 tripartite motif protein 34 isoform 3 TRIM58 0.274 tripartite motif-containing 58 TRIM38 0.260 tripartite motif-containing 38 TRIM11 0.252 tripartite motif-containing 11 TRIM39 0.238 tripartite motif-containing 39 isoform 2 TRIM27 0.234 ret finger protein TRIM39 0.228 tripartite motif-containing 39 isoform 1 TRIM34 0.219 tripartite motif protein 34 isoform 2 TRIM17 0.201 tripartite motif-containing 17 isoform 1 TRIM17 0.201 tripartite motif-containing 17 isoform 1 TRIM60 0.193 ring finger protein 129 TRIML1 0.189 tripartite motif family-like 1 TRIM75 0.186 tripartite motif-containing 75 TRIM4 0.182 tripartite motif protein TRIM4 isoform beta TRIM17 0.181 tripartite motif-containing 17 isoform 2 TRIM7 0.174 tripartite motif-containing 7 isoform 1 TRIM4 0.169 tripartite motif protein TRIM4 isoform alpha MEFV 0.167 Mediterranean fever protein TRIM41 0.167 tripartite motif-containing 41 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.