TRIM17 34768

Name: TRIM17	Sequence: fasta or formatted (450aa)		NCBI GI: 68160935
Description: tripartite motif-containing 17 isoform 2		Referenced in: Tripartite Motif Family
Other entries for this name: alt prot [343aa] tripartite motif-containing 17 isoform 3 alt prot [477aa] tripartite motif-containing 17 isoform 1 alt prot [477aa] tripartite motif-containing 17 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 23 1 C cysteine 3.8 17 1 D aspartate 2.9 13 1 E glutamate 9.8 44 4 F phenylalanine 3.6 16 2 G glycine 6.4 29 1 H histidine 2.4 11 2 I isoleucine 1.8 8 1 K lysine 5.1 23 2 L leucine 10.9 49 4 M methionine 2.9 13 1 N asparagine 2.2 10 2 P proline 6.2 28 2 Q glutamine 6.4 29 2 R arginine 8.0 36 2 S serine 7.1 32 2 T threonine 4.4 20 2 V valine 6.9 31 2 W tryptophan 1.3 6 1 Y tyrosine 2.7 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 17 isoform 2 TRIM17 1.000 tripartite motif-containing 17 isoform 1 TRIM17 1.000 tripartite motif-containing 17 isoform 1 TRIM17 0.579 tripartite motif-containing 17 isoform 3 TRIM11 0.349 tripartite motif-containing 11 TRIM39 0.295 tripartite motif-containing 39 isoform 2 TRIM27 0.291 ret finger protein TRIM58 0.290 tripartite motif-containing 58 TRIM39 0.286 tripartite motif-containing 39 isoform 1 TRIM21 0.275 tripartite motif protein 21 TRIM68 0.270 ring finger protein 137 TRIM4 0.261 tripartite motif protein TRIM4 isoform beta TRIM4 0.246 tripartite motif protein TRIM4 isoform alpha TRIM38 0.232 tripartite motif-containing 38 TRIM75 0.214 tripartite motif-containing 75 TRIM60 0.212 ring finger protein 129 TRIM41 0.210 tripartite motif-containing 41 isoform 1 TRIM6 0.209 tripartite motif-containing 6 isoform 2 TRIM6 0.209 tripartite motif-containing 6 isoform 1 TRIM7 0.209 tripartite motif-containing 7 isoform 1 TRIML1 0.196 tripartite motif family-like 1 TRIM5 0.195 tripartite motif protein TRIM5 isoform alpha TRIM64 0.191 tripartite motif-containing 64 LOC642446 0.191 PREDICTED: tripartite motif-containing protein 64B-... TRIM43 0.185 tripartite motif-containing 43 LOC646754 0.183 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.183 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.183 PREDICTED: tripartite motif-containing protein 64C-... LOC653192 0.180 PREDICTED: Tripartite motif-containing protein 43-li... LOC646754 0.179 PREDICTED: tripartite motif-containing protein 64C-... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.