TRIM27 33384

Name: TRIM27	Sequence: fasta or formatted (513aa)		NCBI GI: 5730009
Description: ret finger protein		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 29 2 C cysteine 4.5 23 2 D aspartate 4.1 21 1 E glutamate 8.8 45 2 F phenylalanine 3.7 19 1 G glycine 5.8 30 2 H histidine 3.3 17 1 I isoleucine 4.5 23 2 K lysine 4.1 21 2 L leucine 10.1 52 2 M methionine 2.3 12 2 N asparagine 2.7 14 1 P proline 5.8 30 2 Q glutamine 6.2 32 3 R arginine 6.4 33 3 S serine 6.8 35 2 T threonine 5.1 26 2 V valine 5.3 27 2 W tryptophan 1.6 8 1 Y tyrosine 3.1 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ret finger protein TRIM39 0.322 tripartite motif-containing 39 isoform 2 TRIM11 0.322 tripartite motif-containing 11 MEFV 0.311 Mediterranean fever protein TRIM39 0.309 tripartite motif-containing 39 isoform 1 TRIM21 0.294 tripartite motif protein 21 TRIM7 0.292 tripartite motif-containing 7 isoform 1 TRIM68 0.289 ring finger protein 137 TRIM17 0.278 tripartite motif-containing 17 isoform 1 TRIM17 0.278 tripartite motif-containing 17 isoform 1 TRIM58 0.261 tripartite motif-containing 58 TRIM17 0.251 tripartite motif-containing 17 isoform 2 TRIM38 0.251 tripartite motif-containing 38 TRIM75 0.243 tripartite motif-containing 75 TRIM10 0.240 tripartite motif-containing 10 isoform 1 TRIM60 0.233 ring finger protein 129 TRIM6 0.233 tripartite motif-containing 6 isoform 2 TRIM6 0.233 tripartite motif-containing 6 isoform 1 TRIM41 0.224 tripartite motif-containing 41 isoform 1 TRIML1 0.220 tripartite motif family-like 1 TRIM4 0.216 tripartite motif protein TRIM4 isoform beta TRIM15 0.214 tripartite motif protein 15 TRIM5 0.210 tripartite motif protein TRIM5 isoform alpha TRIM4 0.207 tripartite motif protein TRIM4 isoform alpha TRIM26 0.207 tripartite motif-containing 26 TRIM22 0.202 tripartite motif-containing 22 TRIM34 0.201 tripartite motif protein 34 isoform 1 TRIM34 0.201 tripartite motif protein 34 isoform 1 TRIM6-TRIM34 0.201 tripartite motif-containing 6 and tripartite motif-c... TRIM10 0.195 tripartite motif-containing 10 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.