TRIM17 34767

Name: TRIM17	Sequence: fasta or formatted (477aa)		NCBI GI: 68160933
Description: tripartite motif-containing 17 isoform 1		Referenced in: Tripartite Motif Family
Other entries for this name: alt prot [343aa] tripartite motif-containing 17 isoform 3 alt prot [450aa] tripartite motif-containing 17 isoform 2 alt mRNA [477aa] tripartite motif-containing 17 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 26 1 C cysteine 4.0 19 1 D aspartate 3.1 15 1 E glutamate 10.1 48 4 F phenylalanine 3.6 17 2 G glycine 6.1 29 1 H histidine 2.3 11 2 I isoleucine 1.9 9 1 K lysine 5.0 24 2 L leucine 10.9 52 4 M methionine 2.9 14 1 N asparagine 2.1 10 2 P proline 6.1 29 2 Q glutamine 6.3 30 2 R arginine 7.8 37 2 S serine 6.9 33 2 T threonine 4.6 22 2 V valine 6.9 33 2 W tryptophan 1.3 6 1 Y tyrosine 2.7 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 17 isoform 1 TRIM17 1.000 tripartite motif-containing 17 isoform 1 TRIM17 0.944 tripartite motif-containing 17 isoform 2 TRIM17 0.604 tripartite motif-containing 17 isoform 3 TRIM11 0.373 tripartite motif-containing 11 TRIM39 0.305 tripartite motif-containing 39 isoform 2 TRIM27 0.304 ret finger protein TRIM58 0.298 tripartite motif-containing 58 TRIM39 0.297 tripartite motif-containing 39 isoform 1 TRIM21 0.284 tripartite motif protein 21 TRIM4 0.279 tripartite motif protein TRIM4 isoform beta TRIM68 0.274 ring finger protein 137 TRIM4 0.265 tripartite motif protein TRIM4 isoform alpha TRIM38 0.248 tripartite motif-containing 38 TRIM75 0.232 tripartite motif-containing 75 TRIM7 0.232 tripartite motif-containing 7 isoform 1 TRIM60 0.231 ring finger protein 129 TRIM6 0.219 tripartite motif-containing 6 isoform 2 TRIM6 0.219 tripartite motif-containing 6 isoform 1 TRIML1 0.219 tripartite motif family-like 1 TRIM5 0.205 tripartite motif protein TRIM5 isoform alpha TRIM64 0.203 tripartite motif-containing 64 LOC642446 0.203 PREDICTED: tripartite motif-containing protein 64B-... TRIM43 0.201 tripartite motif-containing 43 LOC646754 0.198 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.198 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.198 PREDICTED: tripartite motif-containing protein 64C-... TRIM41 0.198 tripartite motif-containing 41 isoform 1 LOC653192 0.195 PREDICTED: Tripartite motif-containing protein 43-li... LOC646754 0.194 PREDICTED: tripartite motif-containing protein 64C-... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.