TRIM41 27942

Name: TRIM41	Sequence: fasta or formatted (630aa)		NCBI GI: 42516572
Description: tripartite motif-containing 41 isoform 1		Referenced in: Tripartite Motif Family
Other entries for this name: alt prot [518aa] tripartite motif-containing 41 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 49 3 C cysteine 3.0 19 2 D aspartate 5.7 36 1 E glutamate 13.5 85 5 F phenylalanine 3.3 21 2 G glycine 6.8 43 2 H histidine 3.3 21 3 I isoleucine 1.3 8 1 K lysine 3.3 21 1 L leucine 8.3 52 2 M methionine 2.4 15 1 N asparagine 1.3 8 1 P proline 5.6 35 4 Q glutamine 5.4 34 2 R arginine 9.2 58 4 S serine 5.7 36 3 T threonine 3.7 23 1 V valine 7.3 46 2 W tryptophan 1.4 9 1 Y tyrosine 1.7 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 41 isoform 1 TRIM41 0.772 tripartite motif-containing 41 isoform 2 TRIM52 0.251 tripartite motif-containing 52 TRIM39 0.209 tripartite motif-containing 39 isoform 2 TRIM39 0.198 tripartite motif-containing 39 isoform 1 TRIM11 0.191 tripartite motif-containing 11 TRIM7 0.190 tripartite motif-containing 7 isoform 1 TRIM27 0.184 ret finger protein TRIM68 0.158 ring finger protein 137 TRIM60 0.156 ring finger protein 129 TRIM21 0.155 tripartite motif protein 21 TRIM58 0.152 tripartite motif-containing 58 TRIM17 0.149 tripartite motif-containing 17 isoform 2 TRIM17 0.149 tripartite motif-containing 17 isoform 1 TRIM17 0.149 tripartite motif-containing 17 isoform 1 TRIM75 0.149 tripartite motif-containing 75 TRIM10 0.142 tripartite motif-containing 10 isoform 1 TRIM38 0.142 tripartite motif-containing 38 TRIM15 0.137 tripartite motif protein 15 TRIM6 0.136 tripartite motif-containing 6 isoform 2 TRIM6 0.136 tripartite motif-containing 6 isoform 1 TRIM26 0.124 tripartite motif-containing 26 TRIM7 0.123 tripartite motif-containing 7 isoform 2 TRIM7 0.120 tripartite motif-containing 7 isoform 3 TRIM7 0.120 tripartite motif-containing 7 isoform 3 TRIM7 0.120 tripartite motif-containing 7 isoform 3 TRIM10 0.119 tripartite motif-containing 10 isoform 2 TRIM4 0.117 tripartite motif protein TRIM4 isoform beta TRIM34 0.114 tripartite motif protein 34 isoform 1 TRIM34 0.114 tripartite motif protein 34 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.