TRIM6-TRIM34 31890

Name: TRIM6-TRIM34	Sequence: fasta or formatted (842aa)		NCBI GI: 51477690
Description: tripartite motif-containing 6 and tripartite motif-containing 34		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.0 34 1 C cysteine 4.5 38 2 D aspartate 3.3 28 1 E glutamate 10.7 90 4 F phenylalanine 3.0 25 2 G glycine 4.4 37 2 H histidine 2.3 19 2 I isoleucine 4.2 35 2 K lysine 6.8 57 2 L leucine 10.8 91 3 M methionine 2.0 17 1 N asparagine 3.3 28 2 P proline 3.7 31 2 Q glutamine 6.2 52 2 R arginine 7.7 65 2 S serine 7.2 61 2 T threonine 4.5 38 1 V valine 7.1 60 2 W tryptophan 1.8 15 1 Y tyrosine 2.5 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 6 and tripartite motif-c... TRIM34 0.582 tripartite motif protein 34 isoform 1 TRIM34 0.582 tripartite motif protein 34 isoform 1 TRIM6 0.378 tripartite motif-containing 6 isoform 1 TRIM22 0.350 tripartite motif-containing 22 TRIM6 0.347 tripartite motif-containing 6 isoform 2 TRIM5 0.302 tripartite motif protein TRIM5 isoform alpha TRIM34 0.295 tripartite motif protein 34 isoform 3 TRIM34 0.291 tripartite motif protein 34 isoform 2 TRIM5 0.212 tripartite motif protein TRIM5 isoform gamma TRIM5 0.211 tripartite motif protein TRIM5 isoform delta TRIM21 0.204 tripartite motif protein 21 TRIM68 0.160 ring finger protein 137 TRIM58 0.145 tripartite motif-containing 58 TRIM11 0.142 tripartite motif-containing 11 TRIM38 0.136 tripartite motif-containing 38 TRIM39 0.126 tripartite motif-containing 39 isoform 2 TRIM60 0.126 ring finger protein 129 TRIM27 0.124 ret finger protein TRIM39 0.120 tripartite motif-containing 39 isoform 1 TRIM17 0.108 tripartite motif-containing 17 isoform 1 TRIM17 0.108 tripartite motif-containing 17 isoform 1 TRIM4 0.099 tripartite motif protein TRIM4 isoform beta TRIM75 0.099 tripartite motif-containing 75 TRIML1 0.098 tripartite motif family-like 1 LOC642446 0.097 PREDICTED: tripartite motif-containing protein 64B-... TRIM64 0.097 tripartite motif-containing 64 LOC646754 0.096 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.096 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.096 PREDICTED: tripartite motif-containing protein 64C-... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.