TRIM34 9708

Name: TRIM34	Sequence: fasta or formatted (488aa)		NCBI GI: 18087807
Description: tripartite motif protein 34 isoform 1		Referenced in: Interferon Tripartite Motif Family
Other entries for this name: alt prot [270aa] tripartite motif protein 34 isoform 3 alt prot [243aa] tripartite motif protein 34 isoform 2 alt mRNA [488aa] tripartite motif protein 34 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.5 17 1 C cysteine 4.7 23 2 D aspartate 3.5 17 1 E glutamate 9.6 47 4 F phenylalanine 3.5 17 2 G glycine 3.7 18 2 H histidine 2.5 12 2 I isoleucine 3.7 18 1 K lysine 7.8 38 2 L leucine 10.9 53 3 M methionine 2.3 11 1 N asparagine 3.7 18 2 P proline 3.9 19 2 Q glutamine 5.3 26 2 R arginine 5.5 27 2 S serine 8.0 39 2 T threonine 4.1 20 1 V valine 8.0 39 2 W tryptophan 2.3 11 1 Y tyrosine 3.7 18 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif protein 34 isoform 1 TRIM34 1.000 tripartite motif protein 34 isoform 1 TRIM6-TRIM34 1.000 tripartite motif-containing 6 and tripartite motif-c... TRIM22 0.602 tripartite motif-containing 22 TRIM6 0.546 tripartite motif-containing 6 isoform 2 TRIM6 0.546 tripartite motif-containing 6 isoform 1 TRIM5 0.519 tripartite motif protein TRIM5 isoform alpha TRIM34 0.507 tripartite motif protein 34 isoform 3 TRIM34 0.501 tripartite motif protein 34 isoform 2 TRIM21 0.351 tripartite motif protein 21 TRIM5 0.346 tripartite motif protein TRIM5 isoform delta TRIM5 0.346 tripartite motif protein TRIM5 isoform gamma TRIM68 0.275 ring finger protein 137 TRIM58 0.250 tripartite motif-containing 58 TRIM11 0.244 tripartite motif-containing 11 TRIM38 0.235 tripartite motif-containing 38 TRIM60 0.217 ring finger protein 129 TRIM39 0.214 tripartite motif-containing 39 isoform 2 TRIM27 0.213 ret finger protein TRIM39 0.205 tripartite motif-containing 39 isoform 1 TRIM17 0.185 tripartite motif-containing 17 isoform 1 TRIM17 0.185 tripartite motif-containing 17 isoform 1 TRIM4 0.171 tripartite motif protein TRIM4 isoform beta TRIM75 0.170 tripartite motif-containing 75 TRIML1 0.169 tripartite motif family-like 1 LOC642446 0.168 PREDICTED: tripartite motif-containing protein 64B-... TRIM64 0.166 tripartite motif-containing 64 LOC646754 0.164 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.164 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.164 PREDICTED: tripartite motif-containing protein 64C-... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.