TRIM41 27943

Name: TRIM41	Sequence: fasta or formatted (518aa)		NCBI GI: 42516574
Description: tripartite motif-containing 41 isoform 2		Referenced in: Tripartite Motif Family
Other entries for this name: alt prot [630aa] tripartite motif-containing 41 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 40 3 C cysteine 3.5 18 2 D aspartate 6.8 35 1 E glutamate 15.3 79 5 F phenylalanine 3.1 16 1 G glycine 5.2 27 2 H histidine 2.5 13 1 I isoleucine 1.4 7 1 K lysine 3.1 16 1 L leucine 7.9 41 2 M methionine 2.9 15 1 N asparagine 1.2 6 1 P proline 6.8 35 4 Q glutamine 5.6 29 2 R arginine 8.3 43 2 S serine 5.0 26 2 T threonine 3.7 19 1 V valine 6.9 36 2 W tryptophan 1.5 8 1 Y tyrosine 1.7 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 41 isoform 2 TRIM41 0.938 tripartite motif-containing 41 isoform 1 TRIM52 0.305 tripartite motif-containing 52 TRIM39 0.193 tripartite motif-containing 39 isoform 2 TRIM11 0.182 tripartite motif-containing 11 TRIM39 0.181 tripartite motif-containing 39 isoform 1 TRIM27 0.181 ret finger protein TRIM7 0.169 tripartite motif-containing 7 isoform 1 TRIM21 0.158 tripartite motif protein 21 TRIM68 0.154 ring finger protein 137 TRIM58 0.148 tripartite motif-containing 58 TRIM17 0.145 tripartite motif-containing 17 isoform 2 TRIM17 0.145 tripartite motif-containing 17 isoform 1 TRIM17 0.145 tripartite motif-containing 17 isoform 1 TRIM10 0.144 tripartite motif-containing 10 isoform 1 TRIM10 0.144 tripartite motif-containing 10 isoform 2 TRIM60 0.144 ring finger protein 129 TRIM75 0.137 tripartite motif-containing 75 TRIM38 0.127 tripartite motif-containing 38 TRIM17 0.125 tripartite motif-containing 17 isoform 3 TRIM15 0.123 tripartite motif protein 15 TRIM6 0.121 tripartite motif-containing 6 isoform 2 TRIM6 0.121 tripartite motif-containing 6 isoform 1 TRIM4 0.119 tripartite motif protein TRIM4 isoform beta TRIM26 0.111 tripartite motif-containing 26 TRIM4 0.107 tripartite motif protein TRIM4 isoform alpha TRIM5 0.103 tripartite motif protein TRIM5 isoform alpha TRIM34 0.098 tripartite motif protein 34 isoform 1 TRIM34 0.098 tripartite motif protein 34 isoform 1 TRIM6-TRIM34 0.098 tripartite motif-containing 6 and tripartite motif-c... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.