TRIM17 11563

Name: TRIM17	Sequence: fasta or formatted (343aa)		NCBI GI: 198442878
Description: tripartite motif-containing 17 isoform 3		Referenced in: Tripartite Motif Family
Other entries for this name: alt prot [477aa] tripartite motif-containing 17 isoform 1 alt prot [450aa] tripartite motif-containing 17 isoform 2 alt prot [477aa] tripartite motif-containing 17 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 21 1 C cysteine 4.1 14 1 D aspartate 2.9 10 1 E glutamate 12.0 41 4 F phenylalanine 2.0 7 1 G glycine 5.8 20 3 H histidine 2.3 8 2 I isoleucine 1.7 6 1 K lysine 5.2 18 2 L leucine 12.5 43 4 M methionine 2.3 8 1 N asparagine 2.3 8 2 P proline 6.4 22 2 Q glutamine 7.0 24 2 R arginine 9.0 31 2 S serine 5.5 19 1 T threonine 4.7 16 2 V valine 5.2 18 2 W tryptophan 1.2 4 1 Y tyrosine 1.5 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 17 isoform 3 TRIM17 0.851 tripartite motif-containing 17 isoform 1 TRIM17 0.851 tripartite motif-containing 17 isoform 1 TRIM17 0.771 tripartite motif-containing 17 isoform 2 TRIM11 0.353 tripartite motif-containing 11 TRIM4 0.287 tripartite motif protein TRIM4 isoform beta TRIM4 0.267 tripartite motif protein TRIM4 isoform alpha TRIM27 0.253 ret finger protein TRIM39 0.253 tripartite motif-containing 39 isoform 1 TRIM39 0.251 tripartite motif-containing 39 isoform 2 TRIM7 0.239 tripartite motif-containing 7 isoform 1 TRIM58 0.233 tripartite motif-containing 58 TRIM5 0.216 tripartite motif protein TRIM5 isoform alpha TRIM21 0.216 tripartite motif protein 21 TRIM5 0.211 tripartite motif protein TRIM5 isoform delta TRIM5 0.211 tripartite motif protein TRIM5 isoform gamma TRIM68 0.211 ring finger protein 137 TRIM6 0.199 tripartite motif-containing 6 isoform 2 TRIM6 0.199 tripartite motif-containing 6 isoform 1 TRIM60 0.199 ring finger protein 129 TRIM6-TRIM34 0.199 tripartite motif-containing 6 and tripartite motif-c... TRIM38 0.196 tripartite motif-containing 38 TRIM41 0.194 tripartite motif-containing 41 isoform 2 TRIM41 0.194 tripartite motif-containing 41 isoform 1 TRIM43 0.191 tripartite motif-containing 43 TRIM75 0.186 tripartite motif-containing 75 LOC653192 0.183 PREDICTED: Tripartite motif-containing protein 43-li... TRIM34 0.182 tripartite motif protein 34 isoform 3 TRIM34 0.182 tripartite motif protein 34 isoform 1 TRIM34 0.182 tripartite motif protein 34 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.