TRIM39 24151

Name: TRIM39	Sequence: fasta or formatted (488aa)		NCBI GI: 25777698
Description: tripartite motif-containing 39 isoform 2		Referenced in: Tripartite Motif Family
Other entries for this name: alt prot [518aa] tripartite motif-containing 39 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 33 3 C cysteine 3.5 17 1 D aspartate 4.7 23 2 E glutamate 10.7 52 4 F phenylalanine 3.7 18 1 G glycine 3.7 18 1 H histidine 2.9 14 2 I isoleucine 3.7 18 2 K lysine 7.0 34 2 L leucine 11.1 54 2 M methionine 0.8 4 1 N asparagine 2.0 10 1 P proline 4.9 24 2 Q glutamine 3.9 19 2 R arginine 8.0 39 2 S serine 5.5 27 2 T threonine 6.8 33 3 V valine 6.1 30 2 W tryptophan 1.6 8 2 Y tyrosine 2.7 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 39 isoform 2 TRIM39 0.984 tripartite motif-containing 39 isoform 1 TRIM60 0.377 ring finger protein 129 TRIM75 0.375 tripartite motif-containing 75 TRIM11 0.359 tripartite motif-containing 11 TRIM27 0.346 ret finger protein TRIM21 0.341 tripartite motif protein 21 TRIM58 0.321 tripartite motif-containing 58 TRIM38 0.310 tripartite motif-containing 38 TRIM68 0.309 ring finger protein 137 TRIM7 0.306 tripartite motif-containing 7 isoform 1 TRIM17 0.299 tripartite motif-containing 17 isoform 1 TRIM17 0.299 tripartite motif-containing 17 isoform 1 TRIM10 0.298 tripartite motif-containing 10 isoform 1 TRIML1 0.277 tripartite motif family-like 1 TRIM17 0.273 tripartite motif-containing 17 isoform 2 TRIM41 0.272 tripartite motif-containing 41 isoform 1 TRIM6 0.254 tripartite motif-containing 6 isoform 1 TRIM69 0.253 tripartite motif-containing 69 isoform a TRIM6 0.252 tripartite motif-containing 6 isoform 2 TRIM4 0.249 tripartite motif protein TRIM4 isoform beta MEFV 0.238 Mediterranean fever protein TRIM4 0.234 tripartite motif protein TRIM4 isoform alpha TRIM62 0.234 tripartite motif-containing 62 TRIM10 0.231 tripartite motif-containing 10 isoform 2 TRIM15 0.230 tripartite motif protein 15 TRIM6-TRIM34 0.220 tripartite motif-containing 6 and tripartite motif-c... TRIM26 0.219 tripartite motif-containing 26 TRIM5 0.219 tripartite motif protein TRIM5 isoform alpha TRIM34 0.217 tripartite motif protein 34 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.