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Search of human proteins with 38570073
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38570073 collagen, type XXV, alpha 1 isoform 2 [Homo
sapiens]
(642 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38570073 collagen, type XXV, alpha 1 isoform 2 [Homo sapiens] 1370 0.0
gi|38570075 collagen, type XXV, alpha 1 isoform 1 [Homo sapiens] 1318 0.0
gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens] 433 e-121
gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens] 432 e-121
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 431 e-120
gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens] 429 e-120
gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens] 429 e-120
gi|22027577 alpha 1 type XIII collagen isoform 5 [Homo sapiens] 427 e-119
gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens] 427 e-119
gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens] 427 e-119
gi|22027574 alpha 1 type XIII collagen isoform 4 [Homo sapiens] 426 e-119
gi|22027571 alpha 1 type XIII collagen isoform 3 [Homo sapiens] 424 e-118
gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens] 422 e-118
gi|22027603 alpha 1 type XIII collagen isoform 16 [Homo sapiens] 421 e-118
gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens] 417 e-116
gi|22027580 alpha 1 type XIII collagen isoform 6 [Homo sapiens] 416 e-116
gi|22027589 alpha 1 type XIII collagen isoform 9 [Homo sapiens] 415 e-116
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 415 e-116
gi|22027587 alpha 1 type XIII collagen isoform 8 [Homo sapiens] 412 e-115
gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens] 412 e-115
gi|22027565 alpha 1 type XIII collagen isoform 1 [Homo sapiens] 412 e-115
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 409 e-114
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 409 e-114
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 409 e-114
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 409 e-114
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 408 e-114
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 408 e-114
gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens] 406 e-113
gi|22027595 alpha 1 type XIII collagen isoform 12 [Homo sapiens] 405 e-113
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 405 e-113
>gi|38570073 collagen, type XXV, alpha 1 isoform 2 [Homo sapiens]
Length = 642
Score = 1370 bits (3545), Expect = 0.0
Identities = 642/642 (100%), Positives = 642/642 (100%)
Query: 1 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ 60
MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ
Sbjct: 1 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ 60
Query: 61 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC 120
ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC
Sbjct: 61 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC 120
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 180
PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ
Sbjct: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 180
Query: 181 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 240
LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG
Sbjct: 181 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 240
Query: 241 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG 300
PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG
Sbjct: 241 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG 300
Query: 301 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT 360
EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT
Sbjct: 301 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT 360
Query: 361 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK 420
KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK
Sbjct: 361 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK 420
Query: 421 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL 480
GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL
Sbjct: 421 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL 480
Query: 481 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP 540
KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP
Sbjct: 481 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP 540
Query: 541 GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP 600
GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP
Sbjct: 541 GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP 600
Query: 601 GPRGEKGDLGEKGEKVTSPSQHVPCLILLLLSALLFSLCDSI 642
GPRGEKGDLGEKGEKVTSPSQHVPCLILLLLSALLFSLCDSI
Sbjct: 601 GPRGEKGDLGEKGEKVTSPSQHVPCLILLLLSALLFSLCDSI 642
>gi|38570075 collagen, type XXV, alpha 1 isoform 1 [Homo sapiens]
Length = 654
Score = 1318 bits (3411), Expect = 0.0
Identities = 615/615 (100%), Positives = 615/615 (100%)
Query: 1 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ 60
MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ
Sbjct: 1 MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ 60
Query: 61 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC 120
ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC
Sbjct: 61 ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC 120
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 180
PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ
Sbjct: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 180
Query: 181 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 240
LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG
Sbjct: 181 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 240
Query: 241 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG 300
PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG
Sbjct: 241 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG 300
Query: 301 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT 360
EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT
Sbjct: 301 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT 360
Query: 361 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK 420
KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK
Sbjct: 361 KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK 420
Query: 421 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL 480
GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL
Sbjct: 421 GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL 480
Query: 481 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP 540
KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP
Sbjct: 481 KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP 540
Query: 541 GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP 600
GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP
Sbjct: 541 GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP 600
Query: 601 GPRGEKGDLGEKGEK 615
GPRGEKGDLGEKGEK
Sbjct: 601 GPRGEKGDLGEKGEK 615
Score = 167 bits (424), Expect = 2e-41
Identities = 92/204 (45%), Positives = 109/204 (53%), Gaps = 8/204 (3%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 180
P GPPG +G +G +GE G PG PG G G KG KG+ GD G M K G
Sbjct: 450 PPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPG--MTGEKGGIGLPG---- 503
Query: 181 LIKRRLIKGDQGQAGPPGPPGPP--GPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGP 238
L +KG++G +G PGP GP GP GPPG G GP G G+PG G G G GP
Sbjct: 504 LPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGP 563
Query: 239 LGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGD 298
GP G++G GA G PG G G PG G G +G PGP+GE G+ GEKG+ G G KG+
Sbjct: 564 AGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKGFRGVKGE 623
Query: 299 TGEKGDPGSSAAGIKGEPGESGRP 322
GE G PG + G G P
Sbjct: 624 KGEPGQPGLDGLDAPCQLGPDGLP 647
>gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens]
Length = 668
Score = 433 bits (1113), Expect = e-121
Identities = 273/669 (40%), Positives = 328/669 (49%), Gaps = 123/669 (18%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQG 147
+ +V +LL +K H + R A + CNCP P +G GR PG PG +G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP---PAFQGPTGR------PGLPGDKG 137
Query: 148 PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRG 207
G G G GD G ++ GP GPPG PG RG
Sbjct: 138 AIGMPGRVGSPGDAGLSII----------------------------GPRGPPGQPGTRG 169
Query: 208 PPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPG--------------- 252
PG G P G+ G PG PG G+ GL GP G PG +G G G
Sbjct: 170 FPGFPG---PIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMP 226
Query: 253 -------IPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDP 305
I + G++ + + G G G PGP G G G G G G G G KGDP
Sbjct: 227 AALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDP 286
Query: 306 GSSAAGIKGEPGESGRPGQKGEPGLPGLPGLP--GIKGEPGFIGPQGE------PGLPGL 357
G G G GE G PG G+ G G PG+ G+KGEPG G +GE PGLPGL
Sbjct: 287 GIQ--GYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGL 344
Query: 358 PGTKGERGEAGPP---GRGERGEPGAPGPKGKQGESGTRG---PKGSKGDRGEKGDSGAQ 411
G KGE+G+AG GRGE G PG PGP G +GE+G G P G GD+GE+G +G Q
Sbjct: 345 LGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQ 404
Query: 412 GPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPP------GPPGPQGLQGPKGE 465
GP GP G KG+ G E++DYNGN++EALQ I TL + GPP GPPG G+ G KGE
Sbjct: 405 GPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGE 464
Query: 466 QGSPGIPGMDGEQGLKGSKGDMGDPGMTGE---------KGGIGLPGLPGANGMKGEKGD 516
G PG PG DGE+G +G GDMG PG G KG G PG PG G KGE G
Sbjct: 465 IGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQ 524
Query: 517 SGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPK------------------GTDGPM 558
+G P P P GPPGPPG G PGP G GL G K GT GP+
Sbjct: 525 AGSPVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPI 584
Query: 559 GPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEK--V 616
G GPAGPKGERG KG G GP G GLPG G PG G G RG+KG G KG+K
Sbjct: 585 GVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQ 644
Query: 617 TSPSQHVPC 625
+P PC
Sbjct: 645 GAPGLDAPC 653
Score = 160 bits (405), Expect = 3e-39
Identities = 91/206 (44%), Positives = 110/206 (53%), Gaps = 26/206 (12%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLI 182
GPPG G++G RG+ G G PGPQGPPG G G +G+ G H ++
Sbjct: 469 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENG---------HPGSPGEKGE- 518
Query: 183 KRRLIKGDQGQAGPP-----GPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMG 237
KG+ GQAG P GP GPPGP G G G G G+ G GE G GE+G G
Sbjct: 519 -----KGETGQAGSPVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRG 573
Query: 238 PLGPPGQKGSIGAPGIPGMNGQ---KGEPGLPGAVGQNGIP---GPKGEPGEQGEKGDAG 291
PLG PG G IG PG G G+ KG+PG+ G G G+P GP G+ G +GE+G G
Sbjct: 574 PLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKG 633
Query: 292 ENGPKGDTGEKGDPGSSAAGIKGEPG 317
GPKGD G++G PG A GE G
Sbjct: 634 SRGPKGDKGDQGAPGLDAPCPLGEDG 659
Score = 157 bits (397), Expect = 3e-38
Identities = 109/281 (38%), Positives = 124/281 (44%), Gaps = 59/281 (20%)
Query: 364 RGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQ--GPRGPPGQKG 421
R EA G P GP G+ G G +G G G G GD+G GPRGPPGQ
Sbjct: 107 RREAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQ-- 164
Query: 422 DQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLK 481
PG G G GP G G PG PG G+ GL
Sbjct: 165 -----------------------------PGTRGFPGFPGPIGLDGKPGHPGPKGDMGLT 195
Query: 482 GSKGDMGDPGMTGEKGGIG-------LPGLPGAN------GMKGEKGDSGMPGPQGPSII 528
G G G G GEKG G L +P A +KGE+ + SI
Sbjct: 196 GPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKGEQSQA--------SIQ 247
Query: 529 GPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLP 588
GPPGPPGP GP GP+G GLPGP G P G GP GPKG+ G +G G G RG G+P
Sbjct: 248 GPPGPPGPPGPSGPLGHPGLPGPMG---PPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 304
Query: 589 GKDGEPGLDGFP--GPRGEKGDLGEKGEKVTSPSQHVPCLI 627
GK G G G G +GE G G KGEK S +P L+
Sbjct: 305 GKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLL 345
>gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens]
Length = 655
Score = 432 bits (1111), Expect = e-121
Identities = 278/673 (41%), Positives = 330/673 (49%), Gaps = 144/673 (21%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRR--GESGPPGQPGP 145
+ +V +LL +K H + R A + CNCP P G G G G GPPGQPG
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCPPAPQGSPGDAGLSIIGPRGPPGQPGT 146
Query: 146 QGPPG---PKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGP 202
+G PG P G G+ G GP KGD G GPPG PGP
Sbjct: 147 RGFPGFPGPIGLDGKPGHPGP------------------------KGDMGLTGPPGQPGP 182
Query: 203 PGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGE 262
G +G G G+ RG E + QG GP GPPG G +G PG+PG G
Sbjct: 183 QGQKGEKGQCGEYPHRG------EQSQASIQGPPGPPGPPGPSGPLGHPGLPG---PMGP 233
Query: 263 PGLPGAVGQNGIPGPKGEPGEQG---EKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGES 319
PGLPG PGPKG+PG QG KG+ G G G G KG PG + AG+KGEPG
Sbjct: 234 PGLPGP------PGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIP 287
Query: 320 GRPGQKGEPGLPGLPGLPGIKGEPG-----FIGPQGEPGLPGLPGTKGERGEAGPPGRGE 374
G G+KG G PGLPGL G KGE G G +GEPG PGLPG G +GEAG G+
Sbjct: 288 GTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVD--GQ 345
Query: 375 RGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGN 434
G PG PG KG++G +G +GP G KG +GE G KG E++DYNGN
Sbjct: 346 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPG-------------KG-----EMVDYNGN 387
Query: 435 LHEALQRITTLTVTGPP------GPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMG 488
++EALQ I TL + GPP GPPG G+ G KGE G PG PG DGE+G +G GDMG
Sbjct: 388 INEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMG 447
Query: 489 DPGMTGE---------KGGIGLPGLPGANGMKGEKGDSGMPGPQG--------------- 524
PG G KG G PG PG G KGE G +G PG +G
Sbjct: 448 PPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGL 507
Query: 525 PSIIGPPGPPGPHGPPGPMGPHGL------------------------------PGPKGT 554
P GPPGPPG G PGP G GL PGP GT
Sbjct: 508 PGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGT 567
Query: 555 DGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGE 614
GP+G GPAGPKGERG KG G GP G GLPG G PG G G RG+KG G KG+
Sbjct: 568 PGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGD 627
Query: 615 K--VTSPSQHVPC 625
K +P PC
Sbjct: 628 KGDQGAPGLDAPC 640
Score = 156 bits (395), Expect = 5e-38
Identities = 96/225 (42%), Positives = 114/225 (50%), Gaps = 37/225 (16%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPG---PKGDKGEQGDQG-PRMVFPKINHGFLSAD 178
GPPG G++G RG+ G G PGPQGPPG P G KGE G G P K G +
Sbjct: 429 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSP 488
Query: 179 QQLIKRRLIKGDQGQAGPPGP-----PGPPGPRGPPGDTGKDGPRG---MPGVPGEPGKP 230
+ KG+ G+ G PG PGP GP GPPG G GP+G + G GE G
Sbjct: 489 GE-------KGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 541
Query: 231 GEQGLMGPLGPPGQKGSIGAPGIPGM---------------NGQKGEPGLPGAVGQNGIP 275
GE+G GPLG PG G G PG PG G KG+PG+ G G G+P
Sbjct: 542 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP 601
Query: 276 ---GPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPG 317
GP G+ G +GE+G G GPKGD G++G PG A GE G
Sbjct: 602 GLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDG 646
Score = 154 bits (390), Expect = 2e-37
Identities = 94/215 (43%), Positives = 109/215 (50%), Gaps = 17/215 (7%)
Query: 427 EIIDYNGNLHEALQRITTLTVTGPPGPPGPQG--------LQGPKGEQGSPGIPGMDGEQ 478
+++D LH +R T G PP PQG + GP+G G PG G G
Sbjct: 94 QLLDEKWKLHSRRRREAPKTSPGCNCPPAPQGSPGDAGLSIIGPRGPPGQPGTRGFPGFP 153
Query: 479 GLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGP----SIIGPPGPP 534
G G G G PG G+ G G PG PG G KGEKG G +G SI GPPGPP
Sbjct: 154 GPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQASIQGPPGPP 213
Query: 535 GPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEP 594
GP GP GP+G GLPGP G P G GP GPKG+ G +G G G RG G+PGK G
Sbjct: 214 GPPGPSGPLGHPGLPGPMG---PPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAK 270
Query: 595 GLDGFP--GPRGEKGDLGEKGEKVTSPSQHVPCLI 627
G G G +GE G G KGEK S +P L+
Sbjct: 271 GAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLL 305
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 431 bits (1107), Expect = e-120
Identities = 259/593 (43%), Positives = 304/593 (51%), Gaps = 92/593 (15%)
Query: 110 IAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPK---------GDKGEQGD 160
+ + P P GP GK G+RGR G G G PG GP G + G+KG +GD
Sbjct: 588 VGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGD 647
Query: 161 QGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKD----- 215
GP D + R + G+ G G GP GPPGP GPPG TG D
Sbjct: 648 PGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGP 707
Query: 216 ----GPRGMPGVPGEPGKPGEQGLMGP---LGPPGQKGSIGAPGIPGMNGQKGEPGLPGA 268
GP+G PG PG+ G PG QGL GP +GPPG+KG +G PG+PGM G G PG PG
Sbjct: 708 KGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGK 767
Query: 269 VGQ------NGIPGPKGE---PGEQGEKGDAGENGPKGDTGEKGDPG----SSAAGIKGE 315
G G PGP+G PG +G KG G G KG GEKG+ G GIKG+
Sbjct: 768 EGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGD 827
Query: 316 PGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGE------PGLPGLPGTKGERGEAGP 369
GE G PG +GE G G G G G+PG +GP GE PGLPG PG +G +G G
Sbjct: 828 RGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGF 887
Query: 370 PG-------RGERGEPGAPGPKGKQGES---GTRGPKGSKGDRGEKGDSGAQGPRGPPGQ 419
PG +G RG PG PGP+G++G + G RGP+G G G KG+SG GP GPPG+
Sbjct: 888 PGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGE 947
Query: 420 KGDQGATEIIDYNGNL-------------HEALQRITTLT-VTGPPGPP------GPQGL 459
+G G + G H + T TGPPGPP GP G
Sbjct: 948 RGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGE 1007
Query: 460 QGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGM 519
GP GE+G PG PG GEQGL G G G G+ G GLPG G G++G GD G+
Sbjct: 1008 TGPMGERGHPGPPGPPGEQGLPGL---AGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGL 1064
Query: 520 PGPQGPSII----GPPGPPGPHGPPGPMGPHGLPGP---KGTDGPMGPHGPAGPKGERGE 572
PGP G + GPPGPPGP G PG GP G GP G GP GP GPAG KG GE
Sbjct: 1065 PGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGE 1124
Query: 573 KGAMGE------------PGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKG 613
KG G PGP GP G PG+DG+ G G PG +G KGD GE+G
Sbjct: 1125 KGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQG 1177
Score = 415 bits (1067), Expect = e-116
Identities = 253/540 (46%), Positives = 285/540 (52%), Gaps = 54/540 (10%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVF-PKINHGFLSADQ 179
P G PGK G G +G GPPG GP G PGP+G KG G +G + K GF
Sbjct: 761 PPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKG 820
Query: 180 QLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPL 239
+ IKGD+G+ GPPGP G GP GP G G +G G G PGE GK G GL G
Sbjct: 821 DMG----IKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYP 876
Query: 240 GPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDT 299
G G KGSIG PG PG NG+KG G PG G G GP G GE+G +G G+ GPKG++
Sbjct: 877 GRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNS 936
Query: 300 GEKGDPG-SSAAGIKGEPGESGRPGQKGEPGLP---GLPGLPGIKGEPGFIGPQGEPGLP 355
G G G G G G +G PG KG PG P GLPG PG +GE GF G G PG P
Sbjct: 937 GGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPP 996
Query: 356 GLPGTKGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGP-- 413
G+ G +G GE GP GERG PG PGP G+QG G G +G+KGD G G G GP
Sbjct: 997 GVVGPQGPTGETGP--MGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPG 1054
Query: 414 -RGPPGQKGDQGATEIIDYNGNLHE-----------------ALQRITTLTVTGPPGPPG 455
RG PG +G G + GN A I GP GPPG
Sbjct: 1055 LRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPG 1114
Query: 456 PQGLQGPKGEQGSPGIPGMDGEQ---GLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKG 512
P G +G GE+G G G DG Q GL G G +G PG G+KG IG PG G+ G KG
Sbjct: 1115 PAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKG 1174
Query: 513 EKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGP------ 566
E+G G GPQGP IG PGP G G PGP G GL G KG +GP G GP GP
Sbjct: 1175 EQGPPGPTGPQGP--IGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGL 1232
Query: 567 ------KGERGEKGAM---GEPGPRGPYGLPGKD---GEPGLDGFPGPRGEKGDLGEKGE 614
KGE G+ G M G PGPRGP G PG D G PG G PG GEKG+ GE GE
Sbjct: 1233 PGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGE 1292
Score = 413 bits (1061), Expect = e-115
Identities = 242/542 (44%), Positives = 280/542 (51%), Gaps = 60/542 (11%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKIN----HGFLS 176
P GP G+ G G RG GPPG PG QG PG G +G +GD GP + K GF
Sbjct: 1001 PQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGF-P 1059
Query: 177 ADQQL---IKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTG------KDGPRGMPGVPGEP 227
D+ L + +KG++G GPPGP G PG RGP G G + GP+G PG GE
Sbjct: 1060 GDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEK 1119
Query: 228 GKPGEQGLMGPLGPPGQKGSIGAPGI------PGMNGQKGEPGLPGAVGQNGIPGPKGEP 281
G PGE+G GP G G +G +G PG PG +G KGE G PG G G G +G P
Sbjct: 1120 GAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPP 1179
Query: 282 GEQGEKGDAGENGPKGDTGEKGDPGSSAA-GIKGEPGESGRPGQKGEPGLPGLPGLPGIK 340
G G +G G+ GP G GE G G G KG+ G G PG G GL GLPG PG K
Sbjct: 1180 GPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEK 1239
Query: 341 GEPGFIGPQGEPGLPGLPGTKGERGEAGPPGR----------GERGEPGAPGPKGKQGES 390
GE G +G G PG PG G G G GP G GE+GEPG G G GE
Sbjct: 1240 GETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEG 1299
Query: 391 GTRGPKGSKGDRGEKGDSGAQGP---RGPPGQKGDQGATEIIDYNGNLHEALQRITTLTV 447
G GPKG +G++GE G SGA GP +GPPG G +G+ + + G+
Sbjct: 1300 GPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGD------------- 1346
Query: 448 TGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGA 507
GPPG PGP G GP G++G G PG G G G G G PG G G G G G
Sbjct: 1347 PGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGE 1406
Query: 508 NGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGP------PGPMGPHGLPG---PKGTDGPM 558
G KGE G G PG GP IGP G PG GP PGP+G GLPG P G GPM
Sbjct: 1407 KGAKGEAGLEGPPGKTGP--IGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPM 1464
Query: 559 GPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKVTS 618
GP G G KG+ G KG G PG G G PG+ GE G G PGP+G G GE+G +T
Sbjct: 1465 GPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQG--ITG 1522
Query: 619 PS 620
PS
Sbjct: 1523 PS 1524
Score = 404 bits (1039), Expect = e-112
Identities = 251/564 (44%), Positives = 284/564 (50%), Gaps = 91/564 (16%)
Query: 121 PAGPPGKRGKRGRRGESG------PPGQPGPQGPPGPKGDKGEQGDQG-------PRMVF 167
PAGPPG+RG G +G +G PPG PG G PG G +GE G QG P +V
Sbjct: 941 PAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVG 1000
Query: 168 PKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEP 227
P+ G G G+ G PGPPGPPG +G PG GK+G +G PG G P
Sbjct: 1001 PQGPTGET-------------GPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLP 1047
Query: 228 GK---------PGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPG-- 276
GK PG++GL GP+G G KG+ G PG PG G GE G GA G GIPG
Sbjct: 1048 GKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRP 1107
Query: 277 -PKGEPGEQGEKGDAGENGPKGDTGEKGDPGS----SAAGIKGEPGESGRPGQKGEPGLP 331
P+G PG GEKG GE GP+G G G G AG G PGE G G+ GEPG
Sbjct: 1108 GPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQK 1167
Query: 332 GLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGE------------------RGEAGPPGR- 372
G G G +G PG GPQG G PG G GE RG GPPG
Sbjct: 1168 GSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPV 1227
Query: 373 GERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYN 432
G +G PG PG KG+ G+ G GP G G RG G GA GP+GPPG G+ GA +
Sbjct: 1228 GLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGA---VGEK 1284
Query: 433 GNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGI---------PGMDGEQGLKGS 483
G EA + + G GPPGP+G +G KGE G G PG DG +G G
Sbjct: 1285 GEPGEAGEP----GLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGP 1340
Query: 484 KGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPM 543
G GDPG GE G G G PG G GE G +G PGP G GP GPPG GPPGP
Sbjct: 1341 VGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEP--GPSGPPGKRGPPGPA 1398
Query: 544 GPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPR 603
GP G G KG G G GP G G G +GA G+PGP G G+PG GE GL G PGP
Sbjct: 1399 GPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPD 1458
Query: 604 GE------------KGDLGEKGEK 615
G KGD G KGEK
Sbjct: 1459 GPPGPMGPPGLPGLKGDSGPKGEK 1482
Score = 403 bits (1036), Expect = e-112
Identities = 242/535 (45%), Positives = 276/535 (51%), Gaps = 89/535 (16%)
Query: 113 EAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINH 172
E P PAG PG+RG G G G PG+PGPQGPPGP G+KG G++GP+ P
Sbjct: 1077 EGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQG--PAGRD 1134
Query: 173 GFLS-----------------ADQQLIK---RRLIKGDQGQAGPPGPPGPPGPRGPPGDT 212
G D+ I ++ KGD+G+ GPPGP GP GP G PG +
Sbjct: 1135 GLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPS 1194
Query: 213 GKDG------------------PRGMPGVPGE------PGKPGEQG------LMGPLGPP 242
G DG PRG PG PG PG PGE+G MGP GPP
Sbjct: 1195 GADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPP 1254
Query: 243 GQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEK 302
G +G GAPG G G G G PGAVG+ G PG GEPG GE G GPKG+ GEK
Sbjct: 1255 GPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGE---GGPPGPKGERGEK 1311
Query: 303 GDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKG 362
G+ G S G G PG G PG G G PG G PG G PG GP G+ G PG G G
Sbjct: 1312 GESGPS--GAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDG 1369
Query: 363 ERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGD 422
E G+ G P G GEPG GP GK+G G GP+G +G++G KG++G +GP G G G
Sbjct: 1370 EPGQTGSP--GPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGP 1427
Query: 423 QGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMD---GEQG 479
QGA G PGP G +G+ GP GEQG PG PG D G G
Sbjct: 1428 QGA----------------------PGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMG 1465
Query: 480 LKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGP 539
G G GD G GEKG GL GL G G +GEKGD G+PGPQG S GP G G GP
Sbjct: 1466 PPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSS--GPKGEQGITGP 1523
Query: 540 PGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEP 594
GP+GP PGP G GP GP G G G G KG G PGP GP G PG+ +P
Sbjct: 1524 SGPIGP---PGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQP 1575
Score = 399 bits (1024), Expect = e-111
Identities = 251/605 (41%), Positives = 294/605 (48%), Gaps = 129/605 (21%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDK----------GEQGDQGPRMVFPKINH 172
GP G+ G G RG G PG PG G PGP G G+ G +GP MV + +
Sbjct: 487 GPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGP-MVSAQESQ 545
Query: 173 GFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGP---RGPPGDTGKDGPRGMPGVPGEPGK 229
Q + R G G G PGP GPPG +G PGD G GPRG+ G PG GK
Sbjct: 546 AQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGK 605
Query: 230 PGE---------QGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGE 280
PG +G+ G GP G +G G G+PG G +G+PG G G G G +G+
Sbjct: 606 PGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGD 665
Query: 281 PGEQGEKGDAGENGPKGDTGEKGDPG----SSAAGIKGEP---------GESGRPGQKGE 327
GE G +G GE GP+G G KG PG G+ G+P GE G PGQ+G
Sbjct: 666 DGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGN 725
Query: 328 PGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT---KGERGEAGPPG-RGERGEPGA--- 380
PG GLPG G G PG GP G+PGLPG+PG G G+ GPPG +G +G PG
Sbjct: 726 PGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGP 785
Query: 381 ---PGPKGKQGESGTRGPKGSKGDRGE------KGDSGAQGPR---GPPGQKGDQGATEI 428
PGP+G +G G RG KG+KG++GE KGD G +G R GPPG +G+ G E
Sbjct: 786 IGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDG-PEG 844
Query: 429 IDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMG 488
G GP G PGP G G KG+ G PG+PG G QG KGS G G
Sbjct: 845 PKGRG---------------GPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPG 889
Query: 489 DPGMTGEKGGIGLPGLPGANGM---------KGEKGDSGMPGPQGPS-IIGPPGPPGPHG 538
PG GEKGG G PG PG G +G +G +G PGP+G S GP GPPG G
Sbjct: 890 FPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERG 949
Query: 539 PPGPMGPHGLPGPKGTDGP------------------------------MGPHGPAGPKG 568
P GP GP G PGPKG GP +GP GP G G
Sbjct: 950 PNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETG 1009
Query: 569 ERGEKGAMGEPGP------------------RGPYGLPGKDGEPGLDGFPGPRGEKGDLG 610
GE+G G PGP GP GLPGKDG PGL GFPG RG G +G
Sbjct: 1010 PMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVG 1069
Query: 611 EKGEK 615
G K
Sbjct: 1070 ALGLK 1074
Score = 396 bits (1018), Expect = e-110
Identities = 240/546 (43%), Positives = 276/546 (50%), Gaps = 72/546 (13%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQG-PRMVFPKINHGFLSADQQL 181
G PG+RG+ G +G++GPPG PG GP GP G+ G G++G P P G L
Sbjct: 976 GHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPG----L 1031
Query: 182 IKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGP---------RGMPGVPGEPGKPGE 232
+ KGD G AG PG GPPG RG PGD G GP G PG PG G PGE
Sbjct: 1032 AGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGE 1091
Query: 233 QGLMG------------PLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGE 280
+G G P GPPG G GAPG G G G GL G VG G GP G
Sbjct: 1092 RGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGP 1151
Query: 281 PGEQGEKGDAGE---NGPKGDTGEKGDPGSSAA-GIKGEPGESGRPGQKGEPGLPGLPGL 336
PGE G+KG+ GE G KGD GE+G PG + G G+PG SG G+ G G GL G
Sbjct: 1152 PGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQ 1211
Query: 337 PGIKGEPGFIGPQGEPGLPGLPGTKGERGEAG---------PPG-RGERGEPGAPGPKGK 386
G +G GF GP G GL GLPG GE+GE G PPG RG G PGA GP+G
Sbjct: 1212 KGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGP 1271
Query: 387 QGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLT 446
G G G G KG+ GE G+ G G GPPG KG++G +G
Sbjct: 1272 PGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSG------------- 1318
Query: 447 VTGPPGPPGPQGLQGPKG---------EQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKG 497
GPPGP GP G GPKG + G PG PG G+ G G KGD G+PG TG G
Sbjct: 1319 AAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPG 1378
Query: 498 GIGLPGLPGANGMKGEKGDSGMPGPQGPS-IIGPPGPPGPHGPPGPMGPHGLPGPKGTDG 556
G PG G G +G G +G G QG G G GP G GP+GP G PG G DG
Sbjct: 1379 PTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDG 1438
Query: 557 PMGPHGPAGPKGERGEKGAMGEPGPRGPYGLP---------GKDGEPGLDGFPGPRGEKG 607
G GP G +G G G G PGP GP GLP G+ G PGL G GP GE+G
Sbjct: 1439 LRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQG 1498
Query: 608 DLGEKG 613
+ G++G
Sbjct: 1499 EKGDRG 1504
Score = 260 bits (665), Expect = 2e-69
Identities = 172/437 (39%), Positives = 202/437 (46%), Gaps = 68/437 (15%)
Query: 196 PPGPPGPPGPRGPPG-DT---GKDGPRGMPGVPGEPG--KPGEQGLMGPLGPPGQKGSIG 249
P P GP P DT G GPRG G GEP +PG M GPPG +G G
Sbjct: 423 PTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPG----MLIEGPPGPEGPAG 478
Query: 250 APGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDT-------GEK 302
PG PG G GQ G PG +G PG G G G GP G G
Sbjct: 479 LPG---------PPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGG 529
Query: 303 GDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKG 362
GD GS + + ++ Q+ L G G G+ G PG +GP PG G KG
Sbjct: 530 GDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPVGP------PGSGGLKG 583
Query: 363 ERGEAGPPG-RGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKG 421
E G+ GP G RG +G PG G G++G +G+ G +G G G KGD G G G PG+KG
Sbjct: 584 EPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKG 643
Query: 422 DQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLK 481
+G GP GPPGP G G +G+ G G G+ GE G +
Sbjct: 644 HRGDP----------------------GPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPR 681
Query: 482 GSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQG-PSIIGPPGPPGPHGPP 540
G G G PG G G G+ G PG G G +G+ G PG QG P G PGP G GPP
Sbjct: 682 GLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPP 741
Query: 541 GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP 600
G GP G PG G G GP G G +G GEKG G PGP+GP G +P
Sbjct: 742 GEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIG------------YP 789
Query: 601 GPRGEKGDLGEKGEKVT 617
GPRG KG G +G K T
Sbjct: 790 GPRGVKGADGIRGLKGT 806
Score = 129 bits (325), Expect = 6e-30
Identities = 78/184 (42%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 103 EHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQG 162
E AK E P P GP G GK G G G PG G QG PG G G G G
Sbjct: 1406 EKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMG 1465
Query: 163 PRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPG 222
P P + +KGD G G G PG G GPPG+ G+ G RG+PG
Sbjct: 1466 P----PGLPG--------------LKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPG 1507
Query: 223 VPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPG 282
G G GEQG+ GP GP G G G PG PG G KG G G G+ G PGP G PG
Sbjct: 1508 PQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPPG 1567
Query: 283 EQGE 286
GE
Sbjct: 1568 PPGE 1571
Score = 98.6 bits (244), Expect = 2e-20
Identities = 83/251 (33%), Positives = 104/251 (41%), Gaps = 47/251 (18%)
Query: 408 SGAQGPRGPPGQKGDQGATE-----IIDYNGNLHEALQRITTLTVTGPPGPPGPQ----- 457
S + P PPG+ D E I + + N ++ T+ PG P Q
Sbjct: 384 SNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPYYDPTSSPSEIGPGMPANQDTIYE 443
Query: 458 GLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDS 517
G+ GP+GE+G G P + E G M G G +G GLPG PG G G+ GD
Sbjct: 444 GIGGPRGEKGQKGEPAII-EPG-------MLIEGPPGPEGPAGLPGPPGTMGPTGQVGD- 494
Query: 518 GMPGPQGPSIIGPPGPPGPHGPPGPMGP-------HGLPGPKGTDGPM------------ 558
PG +GP G PG PG G PGP G G G G+ GPM
Sbjct: 495 --PGERGPP--GRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAIL 550
Query: 559 -----GPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKG 613
GPAGP G G G +G PG G G PG G G G GP G G G +G
Sbjct: 551 QQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRG 610
Query: 614 EKVTSPSQHVP 624
+ ++ +P
Sbjct: 611 RAGSDGARGMP 621
Score = 33.5 bits (75), Expect = 0.62
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 115 PSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGP 151
P +GP G +G+ G G GPPG PG P P
Sbjct: 1541 PKGAKGSSGPTGPKGEAGHPGPPGPPGPPGEVIQPLP 1577
>gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens]
Length = 664
Score = 429 bits (1104), Expect = e-120
Identities = 278/673 (41%), Positives = 332/673 (49%), Gaps = 135/673 (20%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPG--- 144
+ +V +LL +K H + R A + CNCP P +G GR G G PG G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP---PAFQGPTGRPGLPGSPGDAGLSI 143
Query: 145 --PQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGP 202
P+GPPG G +G G GP + K H KGD G GPPG PGP
Sbjct: 144 IGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGP------------KGDMGLTGPPGQPGP 191
Query: 203 PGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGE 262
G +G G G+ RG E + QG GP GPPG G +G PG+PG G
Sbjct: 192 QGQKGEKGQCGEYPHRG------EQSQASIQGPPGPPGPPGPSGPLGHPGLPG---PMGP 242
Query: 263 PGLPGAVGQNGIPGPKGEPGEQG---EKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGES 319
PGLPG PGPKG+PG QG KG+ G G G G KG PG + AG+KGEPG
Sbjct: 243 PGLPGP------PGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIP 296
Query: 320 GRPGQKGEPGLPGLPGLPGIKGEPG-----FIGPQGEPGLPGLPGTKGERGEAGPPGRGE 374
G G+KG G PGLPGL G KGE G G +GEPG PGLPG G +GEAG G+
Sbjct: 297 GTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVD--GQ 354
Query: 375 RGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGN 434
G PG PG KG++G +G +GP G KG +GE G KG E++DYNGN
Sbjct: 355 VGPPGQPGDKGERGAAGEQGPDGPKGSKGEPG-------------KG-----EMVDYNGN 396
Query: 435 LHEALQRITTLTVTGPP------GPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMG 488
++EALQ I TL + GPP GPPG G+ G KGE G PG PG DGE+G +G GDMG
Sbjct: 397 INEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMG 456
Query: 489 DPGMTGE---------KGGIGLPGLPGANGMKGEKGDSGMPGPQG--------------- 524
PG G KG G PG PG G KGE G +G PG +G
Sbjct: 457 PPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGL 516
Query: 525 PSIIGPPGPPGPHGPPGPMGPHGL------------------------------PGPKGT 554
P GPPGPPG G PGP G GL PGP GT
Sbjct: 517 PGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGT 576
Query: 555 DGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGE 614
GP+G GPAGPKGERG KG G GP G GLPG G PG G G RG+KG G KG+
Sbjct: 577 PGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGD 636
Query: 615 K--VTSPSQHVPC 625
K +P PC
Sbjct: 637 KGDQGAPGLDAPC 649
Score = 156 bits (395), Expect = 5e-38
Identities = 96/225 (42%), Positives = 114/225 (50%), Gaps = 37/225 (16%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPG---PKGDKGEQGDQG-PRMVFPKINHGFLSAD 178
GPPG G++G RG+ G G PGPQGPPG P G KGE G G P K G +
Sbjct: 438 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSP 497
Query: 179 QQLIKRRLIKGDQGQAGPPGP-----PGPPGPRGPPGDTGKDGPRG---MPGVPGEPGKP 230
+ KG+ G+ G PG PGP GP GPPG G GP+G + G GE G
Sbjct: 498 GE-------KGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 550
Query: 231 GEQGLMGPLGPPGQKGSIGAPGIPGM---------------NGQKGEPGLPGAVGQNGIP 275
GE+G GPLG PG G G PG PG G KG+PG+ G G G+P
Sbjct: 551 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP 610
Query: 276 ---GPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPG 317
GP G+ G +GE+G G GPKGD G++G PG A GE G
Sbjct: 611 GLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDG 655
Score = 153 bits (386), Expect = 5e-37
Identities = 102/239 (42%), Positives = 116/239 (48%), Gaps = 41/239 (17%)
Query: 395 PKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPP 454
PK S G G G G PG GD G L++ GP GPP
Sbjct: 111 PKTSPGCNCPPAFQGPTGRPGLPGSPGDAG--------------------LSIIGPRGPP 150
Query: 455 GPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEK 514
G G +G G PG G+DG+ G G KGDMG +TG PG PG G KGEK
Sbjct: 151 GQPGT---RGFPGFPGPIGLDGKPGHPGPKGDMG---LTGP------PGQPGPQGQKGEK 198
Query: 515 GDSGMPGPQGP----SIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGER 570
G G +G SI GPPGPPGP GP GP+G GLPGP G P G GP GPKG+
Sbjct: 199 GQCGEYPHRGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMG---PPGLPGPPGPKGDP 255
Query: 571 GEKGAMGEPGPRGPYGLPGKDGEPGLDGFP--GPRGEKGDLGEKGEKVTSPSQHVPCLI 627
G +G G G RG G+PGK G G G G +GE G G KGEK S +P L+
Sbjct: 256 GIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLL 314
>gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens]
Length = 676
Score = 429 bits (1104), Expect = e-120
Identities = 277/679 (40%), Positives = 330/679 (48%), Gaps = 135/679 (19%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQG 147
+ +V +LL +K H + R A + CNCP P GP G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP------------------PAFQGPTG 128
Query: 148 PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQA--GPPGPPGPPGP 205
PG GDKG G G R+ P GD G + GP GPPG PG
Sbjct: 129 RPGLPGDKGAIGMPG-RVGSP--------------------GDAGLSIIGPRGPPGQPGT 167
Query: 206 RGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGM---NGQKGE 262
RG P G GP G+ G PG PG G+ GL GP G PG +G G G G G++ +
Sbjct: 168 RGFP---GFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRGEQSQ 224
Query: 263 PGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRP 322
+ G G G PGP G G G G G G G G KGDPG G G GE G P
Sbjct: 225 ASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQ--GYHGRKGERGMP 282
Query: 323 GQKGEPGLPGLPGLP--GIKGEPGFIGPQGE------PGLPGLPGTKGERGEAGPP---G 371
G G+ G G PG+ G+KGEPG G +GE PGLPGL G KGE+G+AG G
Sbjct: 283 GMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGG 342
Query: 372 RGERGEPGAPGPKGKQGESGTRG---PKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEI 428
RGE G PG PGP G +GE+G G P G GD+GE+G +G QGP GP G KG+ G E+
Sbjct: 343 RGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEM 402
Query: 429 IDYNGNLHEALQRITTLTVTGPPG------PPGPQGLQGPKGEQGSPGIPGMDGEQGLKG 482
+DYNGN++EALQ I TL + GPPG PPG G+ G KGE G PG PG DGE+G +G
Sbjct: 403 VDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRG 462
Query: 483 SKGDMGDPGMTGE---------KGGIGLPGLPGANGMKGEKGDSGMPGPQG--------- 524
GDMG PG G KG G PG PG G KGE G +G PG +G
Sbjct: 463 KPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPG 522
Query: 525 ------PSIIGPPGPPGPHGPPGPMGPHGL------------------------------ 548
P GPPGPPG G PGP G GL
Sbjct: 523 AEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGR 582
Query: 549 PGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGD 608
PGP GT GP+G GPAGPKGERG KG G GP G GLPG G PG G G RG+KG
Sbjct: 583 PGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGS 642
Query: 609 LGEKGEK--VTSPSQHVPC 625
G KG+K +P PC
Sbjct: 643 RGPKGDKGDQGAPGLDAPC 661
Score = 160 bits (404), Expect = 4e-39
Identities = 102/223 (45%), Positives = 120/223 (53%), Gaps = 26/223 (11%)
Query: 411 QGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPG 470
QGP G PG GD+GA + G+ +A L++ GP GPPG G +G G PG
Sbjct: 124 QGPTGRPGLPGDKGAIGMPGRVGSPGDA-----GLSIIGPRGPPGQPGT---RGFPGFPG 175
Query: 471 IPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGP----S 526
G+DG+ G G KGDMG +TG PG PG G KGEKG G +G S
Sbjct: 176 PIGLDGKPGHPGPKGDMG---LTGP------PGQPGPQGQKGEKGQCGEYPHRGEQSQAS 226
Query: 527 IIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYG 586
I GPPGPPGP GP GP+G GLPGP G P G GP GPKG+ G +G G G RG G
Sbjct: 227 IQGPPGPPGPPGPSGPLGHPGLPGPMG---PPGLPGPPGPKGDPGIQGYHGRKGERGMPG 283
Query: 587 LPGKDGEPGLDGFP--GPRGEKGDLGEKGEKVTSPSQHVPCLI 627
+PGK G G G G +GE G G KGEK S +P L+
Sbjct: 284 MPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLL 326
Score = 156 bits (395), Expect = 5e-38
Identities = 96/225 (42%), Positives = 114/225 (50%), Gaps = 37/225 (16%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPG---PKGDKGEQGDQG-PRMVFPKINHGFLSAD 178
GPPG G++G RG+ G G PGPQGPPG P G KGE G G P K G +
Sbjct: 450 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSP 509
Query: 179 QQLIKRRLIKGDQGQAGPPGP-----PGPPGPRGPPGDTGKDGPRG---MPGVPGEPGKP 230
+ KG+ G+ G PG PGP GP GPPG G GP+G + G GE G
Sbjct: 510 GE-------KGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 562
Query: 231 GEQGLMGPLGPPGQKGSIGAPGIPGM---------------NGQKGEPGLPGAVGQNGIP 275
GE+G GPLG PG G G PG PG G KG+PG+ G G G+P
Sbjct: 563 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP 622
Query: 276 ---GPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPG 317
GP G+ G +GE+G G GPKGD G++G PG A GE G
Sbjct: 623 GLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDG 667
>gi|22027577 alpha 1 type XIII collagen isoform 5 [Homo sapiens]
Length = 695
Score = 427 bits (1099), Expect = e-119
Identities = 275/696 (39%), Positives = 331/696 (47%), Gaps = 150/696 (21%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQG 147
+ +V +LL +K H + R A + CNCP P +G GR PG PG +G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP---PAFQGPTGR------PGLPGDKG 137
Query: 148 PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRG 207
G G G GD G ++ GP GPPG PG RG
Sbjct: 138 AIGMPGRVGSPGDAGLSII----------------------------GPRGPPGQPGTRG 169
Query: 208 PPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPG--------------- 252
PG G P G+ G PG PG G+ GL GP G PG +G G G
Sbjct: 170 FPGFPG---PIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMP 226
Query: 253 -------IPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDP 305
I + G++ + + G G G PGP G G G G G G G G KGDP
Sbjct: 227 AALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDP 286
Query: 306 GSSAAGIKGEPGESGRPGQKGEPGLPGLPGLP--GIKGEPGFIGPQGE------PGLPGL 357
G G G GE G PG G+ G G PG+ G+KGEPG G +GE PGLPGL
Sbjct: 287 GIQ--GYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGL 344
Query: 358 PGTKGERGEAGPP---GRGERGEPGAPGPKGKQGESGTRG---PKGSKGDRGEKGDSGAQ 411
G KGE+G+AG GRGE G PG PGP G +GE+G G P G GD+GE+G +G Q
Sbjct: 345 LGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQ 404
Query: 412 GPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPG------PPGPQGLQGPKGE 465
GP GP G KG+ G E++DYNGN++EALQ I TL + GPPG PPG G+ G KGE
Sbjct: 405 GPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGE 464
Query: 466 QGSPGIPGMDGEQGLKGSKGDMGDPGMTGE---------KGGIGLPGLPGANGMKGEKGD 516
G PG PG DGE+G +G GDMG PG G KG G PG PG G KGE G
Sbjct: 465 IGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQ 524
Query: 517 SGMPGPQG---------------PSIIGPPGPPGPHGPPGPMGPHGL------------- 548
+G PG +G P GPPGPPG G PGP G GL
Sbjct: 525 AGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEK 584
Query: 549 -----------------PGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKD 591
PGP GT GP+G GPAGPKGERG KG G GP G GLPG
Sbjct: 585 GDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLH 644
Query: 592 GEPGLDGFPGPRGEKGDLGEKGEK--VTSPSQHVPC 625
G PG G G RG+KG G KG+K +P PC
Sbjct: 645 GPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPC 680
Score = 157 bits (397), Expect = 3e-38
Identities = 109/281 (38%), Positives = 124/281 (44%), Gaps = 59/281 (20%)
Query: 364 RGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQ--GPRGPPGQKG 421
R EA G P GP G+ G G +G G G G GD+G GPRGPPGQ
Sbjct: 107 RREAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQ-- 164
Query: 422 DQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLK 481
PG G G GP G G PG PG G+ GL
Sbjct: 165 -----------------------------PGTRGFPGFPGPIGLDGKPGHPGPKGDMGLT 195
Query: 482 GSKGDMGDPGMTGEKGGIG-------LPGLPGAN------GMKGEKGDSGMPGPQGPSII 528
G G G G GEKG G L +P A +KGE+ + SI
Sbjct: 196 GPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKGEQSQA--------SIQ 247
Query: 529 GPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLP 588
GPPGPPGP GP GP+G GLPGP G P G GP GPKG+ G +G G G RG G+P
Sbjct: 248 GPPGPPGPPGPSGPLGHPGLPGPMG---PPGLPGPPGPKGDPGIQGYHGRKGERGMPGMP 304
Query: 589 GKDGEPGLDGFP--GPRGEKGDLGEKGEKVTSPSQHVPCLI 627
GK G G G G +GE G G KGEK S +P L+
Sbjct: 305 GKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLL 345
Score = 156 bits (395), Expect = 5e-38
Identities = 97/225 (43%), Positives = 116/225 (51%), Gaps = 37/225 (16%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPG---PKGDKGEQGDQG-PRMVFPKINHGFLSAD 178
GPPG G++G RG+ G G PGPQGPPG P G KGE G G P K G +
Sbjct: 469 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSP 528
Query: 179 QQLIKRRLIKGDQGQAGPPGP-----PGPPGPRGPPGDTGKDGPRG---MPGVPGEPGKP 230
+ KG+ G+ G PG PGP GP GPPG G GP+G + G GE G
Sbjct: 529 GE-------KGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 581
Query: 231 GEQGLMGPLG------------PPGQKGSIGAPGIPGMNGQ---KGEPGLPGAVGQNGIP 275
GE+G GPLG PPG G IG PG G G+ KG+PG+ G G G+P
Sbjct: 582 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP 641
Query: 276 ---GPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPG 317
GP G+ G +GE+G G GPKGD G++G PG A GE G
Sbjct: 642 GLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDG 686
>gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens]
Length = 717
Score = 427 bits (1097), Expect = e-119
Identities = 278/722 (38%), Positives = 335/722 (46%), Gaps = 180/722 (24%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQG 147
+ +V +LL +K H + R A + CNCP GPPG G+ G G+ G G PG G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCPPGPPGPTGRPGLPGDKGAIGMPGRVG 146
Query: 148 PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRG 207
PG D G ++ P+ G +G G GP G G PG G
Sbjct: 147 SPG---------DAGLSIIGPRGPPGQPGT----------RGFPGFPGPIGLDGKPGHPG 187
Query: 208 PPGDTGKDGPRGMPGVPGEPGKPGEQG--------------------------------- 234
P GD G GP G PG G+ G+ G+ G
Sbjct: 188 PKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVR 247
Query: 235 --------------------LMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGI 274
+ GP GPPG G G G PG+ G G PGLPG
Sbjct: 248 LAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGP------ 301
Query: 275 PGPKGEPGEQG---EKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLP 331
PGPKG+PG QG KG+ G G G G KG PG + AG+KGE
Sbjct: 302 PGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGE---------------- 345
Query: 332 GLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPP---GRGERGEPGAPGPKGKQG 388
PG+PG KGE G +G PGLPGL G KGE+G+AG GRGE G PG PGP G +G
Sbjct: 346 --PGIPGTKGEKG---AEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKG 400
Query: 389 ESGTRG---PKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTL 445
E+G G P G GD+GE+G +G QGP GP G KG+ G E++DYNGN++EALQ I TL
Sbjct: 401 EAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTL 460
Query: 446 TVTGPPG------PPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGE---- 495
+ GPPG PPG G+ G KGE G PG PG DGE+G +G GDMG PG G
Sbjct: 461 ALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKD 520
Query: 496 -----KGGIGLPGLPGANGMKGEKGDSGMPGPQG---------------PSIIGPPGPPG 535
KG G PG PG G KGE G +G PG +G P GPPGPPG
Sbjct: 521 GPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPG 580
Query: 536 PHGPPGPMGPHGL------------------------------PGPKGTDGPMGPHGPAG 565
G PGP G GL PGP GT GP+G GPAG
Sbjct: 581 LQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAG 640
Query: 566 PKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEK--VTSPSQHV 623
PKGERG KG G GP G GLPG G PG G G RG+KG G KG+K +P
Sbjct: 641 PKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDA 700
Query: 624 PC 625
PC
Sbjct: 701 PC 702
Score = 156 bits (395), Expect = 5e-38
Identities = 97/225 (43%), Positives = 116/225 (51%), Gaps = 37/225 (16%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPG---PKGDKGEQGDQG-PRMVFPKINHGFLSAD 178
GPPG G++G RG+ G G PGPQGPPG P G KGE G G P K G +
Sbjct: 491 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSP 550
Query: 179 QQLIKRRLIKGDQGQAGPPGP-----PGPPGPRGPPGDTGKDGPRG---MPGVPGEPGKP 230
+ KG+ G+ G PG PGP GP GPPG G GP+G + G GE G
Sbjct: 551 GE-------KGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 603
Query: 231 GEQGLMGPLG------------PPGQKGSIGAPGIPGMNGQ---KGEPGLPGAVGQNGIP 275
GE+G GPLG PPG G IG PG G G+ KG+PG+ G G G+P
Sbjct: 604 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP 663
Query: 276 ---GPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPG 317
GP G+ G +GE+G G GPKGD G++G PG A GE G
Sbjct: 664 GLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDG 708
Score = 147 bits (372), Expect = 2e-35
Identities = 111/292 (38%), Positives = 125/292 (42%), Gaps = 82/292 (28%)
Query: 383 PKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRI 442
PK G + GP G G G GD GA G G G GD G
Sbjct: 111 PKTSPGCNCPPGPPGPTGRPGLPGDKGAIGMPGRVGSPGDAG------------------ 152
Query: 443 TTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLP 502
L++ GP GPPG G +G G PG G+DG+ G G KGDMG +TG P
Sbjct: 153 --LSIIGPRGPPGQPGT---RGFPGFPGPIGLDGKPGHPGPKGDMG---LTGP------P 198
Query: 503 GLPGANGMKGEKGDSG----------------------------------MPGP------ 522
G PG G KGEKG G P P
Sbjct: 199 GQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRT 258
Query: 523 -QGP----SIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMG 577
QG SI GPPGPPGP GP GP+G GLPGP G P G GP GPKG+ G +G G
Sbjct: 259 FQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMG---PPGLPGPPGPKGDPGIQGYHG 315
Query: 578 EPGPRGPYGLPGKDGEPGLDGFP--GPRGEKGDLGEKGEKVTSPSQHVPCLI 627
G RG G+PGK G G G G +GE G G KGEK S +P L+
Sbjct: 316 RKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLL 367
Score = 56.6 bits (135), Expect = 7e-08
Identities = 38/109 (34%), Positives = 44/109 (40%), Gaps = 32/109 (29%)
Query: 112 REAPSECNCPAGPPGKRGKRGRRGESGPPGQPGP---------QGPPGPKGDKGEQGDQG 162
R P P G PG G +G RG G PG GP GPPG KG++GE+G +G
Sbjct: 623 RPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKG 682
Query: 163 PRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPG--PPGPPGPRGPP 209
R KGD+G G PG P P G G P
Sbjct: 683 SRGP---------------------KGDKGDQGAPGLDAPCPLGEDGLP 710
>gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens]
Length = 686
Score = 427 bits (1097), Expect = e-119
Identities = 275/687 (40%), Positives = 332/687 (48%), Gaps = 141/687 (20%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQG 147
+ +V +LL +K H + R A + CNCP P +G GR PG PG +G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP---PAFQGPTGR------PGLPGDKG 137
Query: 148 PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRG 207
G G G GD G ++ GP GPPG PG RG
Sbjct: 138 AIGMPGRVGSPGDAGLSII----------------------------GPRGPPGQPGTRG 169
Query: 208 PPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPG---------IPGMN- 257
PG G P G+ G PG PG G+ GL GP G PG +G G G +P +N
Sbjct: 170 FPGFPG---PIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNS 226
Query: 258 ---------------GQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEK 302
G++ + + G G G PGP G G G G G G G G K
Sbjct: 227 VRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPK 286
Query: 303 GDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLP--GIKGEPGFIGPQGE------PGL 354
GDPG G G GE G PG G+ G G PG+ G+KGEPG G +GE PGL
Sbjct: 287 GDPGIQ--GYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGL 344
Query: 355 PGLPGTKGERGEAGPP---GRGERGEPGAPGPKGKQGESGTRG---PKGSKGDRGEKGDS 408
PGL G KGE+G+AG GRGE G PG PGP G +GE+G G P G GD+GE+G +
Sbjct: 345 PGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAA 404
Query: 409 GAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPP------GPPGPQGLQGP 462
G QGP GP G KG+ G E++DYNGN++EALQ I TL + GPP GPPG G+ G
Sbjct: 405 GEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQ 464
Query: 463 KGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGE---------KGGIGLPGLPGANGMKGE 513
KGE G PG PG DGE+G +G GDMG PG G KG G PG PG G KGE
Sbjct: 465 KGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGE 524
Query: 514 KGDSGMPGPQG---------------PSIIGPPGPPGPHGPPGPMGPHGLPGPK------ 552
G +G PG +G P GPPGPPG G PGP G GL G K
Sbjct: 525 TGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 584
Query: 553 ------------GTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP 600
GT GP+G GPAGPKGERG KG G GP G GLPG G PG G
Sbjct: 585 GEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNR 644
Query: 601 GPRGEKGDLGEKGEK--VTSPSQHVPC 625
G RG+KG G KG+K +P PC
Sbjct: 645 GERGKKGSRGPKGDKGDQGAPGLDAPC 671
Score = 158 bits (400), Expect = 1e-38
Identities = 94/213 (44%), Positives = 112/213 (52%), Gaps = 25/213 (11%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPG---PKGDKGEQGDQG-PRMVFPKINHGFLSAD 178
GPPG G++G RG+ G G PGPQGPPG P G KGE G G P K G +
Sbjct: 472 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSP 531
Query: 179 QQLIKRRLIKGDQGQAGPPG--------PPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKP 230
+ KG+ G+ G PG P GPPGP G G G G G+ G GE G
Sbjct: 532 GE-------KGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 584
Query: 231 GEQGLMGPLGPPGQKGSIGAPGIPGMNGQ---KGEPGLPGAVGQNGIP---GPKGEPGEQ 284
GE+G GPLG PG G IG PG G G+ KG+PG+ G G G+P GP G+ G +
Sbjct: 585 GEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNR 644
Query: 285 GEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPG 317
GE+G G GPKGD G++G PG A GE G
Sbjct: 645 GERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDG 677
Score = 152 bits (384), Expect = 9e-37
Identities = 105/245 (42%), Positives = 122/245 (49%), Gaps = 48/245 (19%)
Query: 411 QGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPG 470
QGP G PG GD+GA + G+ +A L++ GP GPPG G +G G PG
Sbjct: 124 QGPTGRPGLPGDKGAIGMPGRVGSPGDA-----GLSIIGPRGPPGQPGT---RGFPGFPG 175
Query: 471 IPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSG------------ 518
G+DG+ G G KGDMG +TG PG PG G KGEKG G
Sbjct: 176 PIGLDGKPGHPGPKGDMG---LTGP------PGQPGPQGQKGEKGQCGEYPHRLLPLLNS 226
Query: 519 ---MPGP-------QGP----SIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPA 564
P P QG SI GPPGPPGP GP GP+G GLPGP G P G GP
Sbjct: 227 VRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMG---PPGLPGPP 283
Query: 565 GPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP--GPRGEKGDLGEKGEKVTSPSQH 622
GPKG+ G +G G G RG G+PGK G G G G +GE G G KGEK S
Sbjct: 284 GPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPG 343
Query: 623 VPCLI 627
+P L+
Sbjct: 344 LPGLL 348
Score = 72.0 bits (175), Expect = 2e-12
Identities = 48/116 (41%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 511 KGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGER 570
K G + P QGP+ G PG PG G G G G PG G +GP GP G G R
Sbjct: 112 KTSPGCNCPPAFQGPT--GRPGLPGDKGAIGMPGRVGSPGDAGLS-IIGPRGPPGQPGTR 168
Query: 571 GEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKVTSPSQHVPCL 626
G G G G G G PG G+ GL G PG G +G GEKG+ P + +P L
Sbjct: 169 GFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLL 224
>gi|22027574 alpha 1 type XIII collagen isoform 4 [Homo sapiens]
Length = 698
Score = 426 bits (1095), Expect = e-119
Identities = 276/699 (39%), Positives = 333/699 (47%), Gaps = 153/699 (21%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQG 147
+ +V +LL +K H + R A + CNCP P +G GR PG PG +G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP---PAFQGPTGR------PGLPGDKG 137
Query: 148 PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRG 207
G G G GD G ++ GP GPPG PG RG
Sbjct: 138 AIGMPGRVGSPGDAGLSII----------------------------GPRGPPGQPGTRG 169
Query: 208 PPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPG---------IPGMN- 257
PG G P G+ G PG PG G+ GL GP G PG +G G G +P +N
Sbjct: 170 FPGFPG---PIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNS 226
Query: 258 ---------------GQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEK 302
G++ + + G G G PGP G G G G G G G G K
Sbjct: 227 VRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPK 286
Query: 303 GDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLP--GIKGEPGFIGPQGE------PGL 354
GDPG G G GE G PG G+ G G PG+ G+KGEPG G +GE PGL
Sbjct: 287 GDPGIQ--GYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGL 344
Query: 355 PGLPGTKGERGEAGPP---GRGERGEPGAPGPKGKQGESGTRG---PKGSKGDRGEKGDS 408
PGL G KGE+G+AG GRGE G PG PGP G +GE+G G P G GD+GE+G +
Sbjct: 345 PGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAA 404
Query: 409 GAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPG------PPGPQGLQGP 462
G QGP GP G KG+ G E++DYNGN++EALQ I TL + GPPG PPG G+ G
Sbjct: 405 GEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQ 464
Query: 463 KGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGE---------KGGIGLPGLPGANGMKGE 513
KGE G PG PG DGE+G +G GDMG PG G KG G PG PG G KGE
Sbjct: 465 KGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGE 524
Query: 514 KGDSGMPGPQG---------------PSIIGPPGPPGPHGPPGPMGPHGL---------- 548
G +G PG +G P GPPGPPG G PGP G GL
Sbjct: 525 TGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 584
Query: 549 --------------------PGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLP 588
PGP GT GP+G GPAGPKGERG KG G GP G GLP
Sbjct: 585 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP 644
Query: 589 GKDGEPGLDGFPGPRGEKGDLGEKGEK--VTSPSQHVPC 625
G G PG G G RG+KG G KG+K +P PC
Sbjct: 645 GLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPC 683
Score = 156 bits (395), Expect = 5e-38
Identities = 97/225 (43%), Positives = 116/225 (51%), Gaps = 37/225 (16%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPG---PKGDKGEQGDQG-PRMVFPKINHGFLSAD 178
GPPG G++G RG+ G G PGPQGPPG P G KGE G G P K G +
Sbjct: 472 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSP 531
Query: 179 QQLIKRRLIKGDQGQAGPPGP-----PGPPGPRGPPGDTGKDGPRG---MPGVPGEPGKP 230
+ KG+ G+ G PG PGP GP GPPG G GP+G + G GE G
Sbjct: 532 GE-------KGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 584
Query: 231 GEQGLMGPLG------------PPGQKGSIGAPGIPGMNGQ---KGEPGLPGAVGQNGIP 275
GE+G GPLG PPG G IG PG G G+ KG+PG+ G G G+P
Sbjct: 585 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP 644
Query: 276 ---GPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPG 317
GP G+ G +GE+G G GPKGD G++G PG A GE G
Sbjct: 645 GLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDG 689
Score = 152 bits (384), Expect = 9e-37
Identities = 105/245 (42%), Positives = 122/245 (49%), Gaps = 48/245 (19%)
Query: 411 QGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPG 470
QGP G PG GD+GA + G+ +A L++ GP GPPG G +G G PG
Sbjct: 124 QGPTGRPGLPGDKGAIGMPGRVGSPGDA-----GLSIIGPRGPPGQPGT---RGFPGFPG 175
Query: 471 IPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSG------------ 518
G+DG+ G G KGDMG +TG PG PG G KGEKG G
Sbjct: 176 PIGLDGKPGHPGPKGDMG---LTGP------PGQPGPQGQKGEKGQCGEYPHRLLPLLNS 226
Query: 519 ---MPGP-------QGP----SIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPA 564
P P QG SI GPPGPPGP GP GP+G GLPGP G P G GP
Sbjct: 227 VRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMG---PPGLPGPP 283
Query: 565 GPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP--GPRGEKGDLGEKGEKVTSPSQH 622
GPKG+ G +G G G RG G+PGK G G G G +GE G G KGEK S
Sbjct: 284 GPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPG 343
Query: 623 VPCLI 627
+P L+
Sbjct: 344 LPGLL 348
Score = 72.0 bits (175), Expect = 2e-12
Identities = 48/116 (41%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 511 KGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGER 570
K G + P QGP+ G PG PG G G G G PG G +GP GP G G R
Sbjct: 112 KTSPGCNCPPAFQGPT--GRPGLPGDKGAIGMPGRVGSPGDAGLS-IIGPRGPPGQPGTR 168
Query: 571 GEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKVTSPSQHVPCL 626
G G G G G G PG G+ GL G PG G +G GEKG+ P + +P L
Sbjct: 169 GFPGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLL 224
>gi|22027571 alpha 1 type XIII collagen isoform 3 [Homo sapiens]
Length = 700
Score = 424 bits (1089), Expect = e-118
Identities = 279/713 (39%), Positives = 332/713 (46%), Gaps = 179/713 (25%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPA---------GPPGKRGKRGRRGESG 138
+ +V +LL +K H + R A + CNCP G PG +G G G G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVG 146
Query: 139 PPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPG 198
PG G G PGP G G+ G GP KGD G GPPG
Sbjct: 147 QPGTRGFPGFPGPIGLDGKPGHPGP------------------------KGDMGLTGPPG 182
Query: 199 PPGPPGPRGPPGDTGKDGPR----GMPGV------------------------------- 223
PGP G +G G G+ R MP
Sbjct: 183 QPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTF 242
Query: 224 PGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGE 283
GE + QG GP GPPG G +G PG+PG G PGLPG PGPKG+PG
Sbjct: 243 QGEQSQASIQGPPGPPGPPGPSGPLGHPGLPG---PMGPPGLPGP------PGPKGDPGI 293
Query: 284 QG---EKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIK 340
QG KG+ G G G G KG PG + AG+KGE PG+PG K
Sbjct: 294 QGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGE------------------PGIPGTK 335
Query: 341 GEPGFIGPQGEPGLPGLPGTKGERGEAGPP---GRGERGEPGAPGPKGKQGESGTRG--- 394
GE G +G PGLPGL G KGE+G+AG GRGE G PG PGP G +GE+G G
Sbjct: 336 GEKG---AEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVG 392
Query: 395 PKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPG-- 452
P G GD+GE+G +G QGP GP G KG+ G E++DYNGN++EALQ I TL + GPPG
Sbjct: 393 PPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLP 452
Query: 453 ----PPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGE---------KGGI 499
PPG G+ G KGE G PG PG DGE+G +G GDMG PG G KG
Sbjct: 453 GQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGEN 512
Query: 500 GLPGLPGANGMKGEKGDSGMPGPQG---------------PSIIGPPGPPGPHGPPGPMG 544
G PG PG G KGE G +G PG +G P GPPGPPG G PGP G
Sbjct: 513 GHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKG 572
Query: 545 PHGL------------------------------PGPKGTDGPMGPHGPAGPKGERGEKG 574
GL PGP GT GP+G GPAGPKGERG KG
Sbjct: 573 EAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKG 632
Query: 575 AMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEK--VTSPSQHVPC 625
G GP G GLPG G PG G G RG+KG G KG+K +P PC
Sbjct: 633 DPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPC 685
Score = 281 bits (719), Expect = 1e-75
Identities = 184/461 (39%), Positives = 216/461 (46%), Gaps = 100/461 (21%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPR----MVFPKINHGFLS 176
P GPPG G G G GP G PG GPPGPKGD G QG G + M HG
Sbjct: 257 PPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKG 316
Query: 177 AD----------------------------QQLIKRRLIKGD--------QGQAGPPGPP 200
A L+ ++ KGD +G+ GPPG P
Sbjct: 317 APGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLP 376
Query: 201 GPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGP---------------------- 238
GPPGP+G G G+ GP G PG GE G GEQG GP
Sbjct: 377 GPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEA 436
Query: 239 ---------LGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQ---GE 286
+GPPG G IG PG PG+ GQKGE GLPG G +G GP+G+PG+ G
Sbjct: 437 LQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGP 496
Query: 287 KGDAGENGPKGDTGEKGDPGS-SAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGF 345
+G G++GP G GE G PGS G KGE G++G PG+KGE G G PG + G PG
Sbjct: 497 QGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAE-VPGLPGP 555
Query: 346 IGPQGEPGLPGLPGTKGERGEAGPPG-RGERGEPGAPGPKGKQGESGTRGPKGSKGDRGE 404
GP G PGL G+PG KGE G G G +G +GE G GP G G SG G G G G
Sbjct: 556 EGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGP 615
Query: 405 KGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKG 464
G G GP+G G KGD G +TGP G G GL GP G
Sbjct: 616 IGVPGPAGPKGERGSKGDPG----------------------MTGPTGAAGLPGLHGPPG 653
Query: 465 EQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLP 505
++G+ G G G +G KG KGD G PG+ +G GLP
Sbjct: 654 DKGNRGERGKKGSRGPKGDKGDQGAPGLDA-PCPLGEDGLP 693
Score = 137 bits (346), Expect = 2e-32
Identities = 101/260 (38%), Positives = 115/260 (44%), Gaps = 62/260 (23%)
Query: 427 EIIDYNGNLHEALQRITTLTVTG---PP---GPPGPQGLQGPKGEQGSPGIPGMDGEQGL 480
+++D LH +R T G PP GP G GL G KG G PG G G +G
Sbjct: 94 QLLDEKWKLHSRRRREAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGQPGTRGF 153
Query: 481 KGSKGDMG---DPGMTGEKGGIGL---PGLPGANGMKGEKGDSG---------------- 518
G G +G PG G KG +GL PG PG G KGEKG G
Sbjct: 154 PGFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALR 213
Query: 519 ------------------MPGP-------QGP----SIIGPPGPPGPHGPPGPMGPHGLP 549
P P QG SI GPPGPPGP GP GP+G GLP
Sbjct: 214 SSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLP 273
Query: 550 GPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP--GPRGEKG 607
GP G P G GP GPKG+ G +G G G RG G+PGK G G G G +GE G
Sbjct: 274 GPMG---PPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPG 330
Query: 608 DLGEKGEKVTSPSQHVPCLI 627
G KGEK S +P L+
Sbjct: 331 IPGTKGEKGAEGSPGLPGLL 350
Score = 56.6 bits (135), Expect = 7e-08
Identities = 38/109 (34%), Positives = 44/109 (40%), Gaps = 32/109 (29%)
Query: 112 REAPSECNCPAGPPGKRGKRGRRGESGPPGQPGP---------QGPPGPKGDKGEQGDQG 162
R P P G PG G +G RG G PG GP GPPG KG++GE+G +G
Sbjct: 606 RPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKG 665
Query: 163 PRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPG--PPGPPGPRGPP 209
R KGD+G G PG P P G G P
Sbjct: 666 SRGP---------------------KGDKGDQGAPGLDAPCPLGEDGLP 693
>gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens]
Length = 657
Score = 422 bits (1086), Expect = e-118
Identities = 273/682 (40%), Positives = 326/682 (47%), Gaps = 160/682 (23%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQG 147
+ +V +LL +K H + R A + CNCP G+ G RG G GP G G G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCPPVFQGQPGTRGFPGFPGPIGLDGKPG 146
Query: 148 PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRG 207
PGPKG D G GPPG PGP G +G
Sbjct: 147 HPGPKG------------------------------------DMGLTGPPGQPGPQGQKG 170
Query: 208 PPGDTGKDGPR----GMPG---------VPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIP 254
G G+ R MP + GE + QG GP GPPG G +G PG+P
Sbjct: 171 EKGQCGEYPHRECLSSMPAALRSSQIIALKGEQSQASIQGPPGPPGPPGPSGPLGHPGLP 230
Query: 255 GMNGQKGEPGLPGAVGQNGIPGPKGEPGEQG---EKGDAGENGPKGDTGEKGDPGSSAAG 311
G G PGLPG PGPKG+PG QG KG+ G G G G KG PG + AG
Sbjct: 231 G---PMGPPGLPGP------PGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAG 281
Query: 312 IKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPP- 370
+KGE PG+PG KGE G +G PGLPGL G KGE+G+AG
Sbjct: 282 MKGE------------------PGIPGTKGEKG---AEGSPGLPGLLGQKGEKGDAGNSI 320
Query: 371 --GRGERGEPGAPGPKGKQGESGTRG---PKGSKGDRGEKGDSGAQGPRGPPGQKGDQGA 425
GRGE G PG PGP G +GE+G G P G GD+GE+G +G QGP GP G KG+ G
Sbjct: 321 GGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGEPGK 380
Query: 426 TEIIDYNGNLHEALQRITTLTVTGPPG------PPGPQGLQGPKGEQGSPGIPGMDGEQG 479
E++DYNGN++EALQ I TL + GPPG PPG G+ G KGE G PG PG DGE+G
Sbjct: 381 GEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKG 440
Query: 480 LKGSKGDMGDPGMTGE---------KGGIGLPGLPGANGMKGEKGDSGMPGPQG------ 524
+G GDMG PG G KG G PG PG G KGE G +G PG +G
Sbjct: 441 PRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKG 500
Query: 525 ---------PSIIGPPGPPGPHGPPGPMGPHGL--------------------------- 548
P GPPGPPG G PGP G GL
Sbjct: 501 NPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGL 560
Query: 549 ---PGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGE 605
PGP GT GP+G GPAGPKGERG KG G GP G GLPG G PG G G RG+
Sbjct: 561 DGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGK 620
Query: 606 KGDLGEKGEK--VTSPSQHVPC 625
KG G KG+K +P PC
Sbjct: 621 KGSRGPKGDKGDQGAPGLDAPC 642
Score = 156 bits (395), Expect = 5e-38
Identities = 96/225 (42%), Positives = 114/225 (50%), Gaps = 37/225 (16%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPG---PKGDKGEQGDQG-PRMVFPKINHGFLSAD 178
GPPG G++G RG+ G G PGPQGPPG P G KGE G G P K G +
Sbjct: 431 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSP 490
Query: 179 QQLIKRRLIKGDQGQAGPPGP-----PGPPGPRGPPGDTGKDGPRG---MPGVPGEPGKP 230
+ KG+ G+ G PG PGP GP GPPG G GP+G + G GE G
Sbjct: 491 GE-------KGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 543
Query: 231 GEQGLMGPLGPPGQKGSIGAPGIPGM---------------NGQKGEPGLPGAVGQNGIP 275
GE+G GPLG PG G G PG PG G KG+PG+ G G G+P
Sbjct: 544 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP 603
Query: 276 ---GPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPG 317
GP G+ G +GE+G G GPKGD G++G PG A GE G
Sbjct: 604 GLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDG 648
Score = 142 bits (358), Expect = 9e-34
Identities = 94/226 (41%), Positives = 110/226 (48%), Gaps = 37/226 (16%)
Query: 427 EIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGD 486
+++D LH +R T G PP QG G +G G PG G+DG+ G G KGD
Sbjct: 94 QLLDEKWKLHSRRRREAPKTSPGCNCPPVFQGQPGTRGFPGFPGPIGLDGKPGHPGPKGD 153
Query: 487 MGDPGMTGEKGGIGLPGLPGANGMKGEKGDSG----------------------MPGPQG 524
MG +TG PG PG G KGEKG G + G Q
Sbjct: 154 MG---LTGP------PGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKGEQS 204
Query: 525 P-SIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRG 583
SI GPPGPPGP GP GP+G GLPGP G P G GP GPKG+ G +G G G RG
Sbjct: 205 QASIQGPPGPPGPPGPSGPLGHPGLPGPMG---PPGLPGPPGPKGDPGIQGYHGRKGERG 261
Query: 584 PYGLPGKDGEPGLDGFP--GPRGEKGDLGEKGEKVTSPSQHVPCLI 627
G+PGK G G G G +GE G G KGEK S +P L+
Sbjct: 262 MPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLL 307
>gi|22027603 alpha 1 type XIII collagen isoform 16 [Homo sapiens]
Length = 660
Score = 421 bits (1083), Expect = e-118
Identities = 272/685 (39%), Positives = 326/685 (47%), Gaps = 163/685 (23%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQG 147
+ +V +LL +K H + R A + CNCP G+ G RG G GP G G G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCPPVFQGQPGTRGFPGFPGPIGLDGKPG 146
Query: 148 PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRG 207
PGPKG D G GPPG PGP G +G
Sbjct: 147 HPGPKG------------------------------------DMGLTGPPGQPGPQGQKG 170
Query: 208 PPGDTGKDGPRGMPGV----------------PGEPGKPGEQGLMGPLGPPGQKGSIGAP 251
G G+ R +P + GE + QG GP GPPG G +G P
Sbjct: 171 EKGQCGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHP 230
Query: 252 GIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQG---EKGDAGENGPKGDTGEKGDPGSS 308
G+PG G PGLPG PGPKG+PG QG KG+ G G G G KG PG +
Sbjct: 231 GLPG---PMGPPGLPGP------PGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIA 281
Query: 309 AAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAG 368
AG+KGE PG+PG KGE G +G PGLPGL G KGE+G+AG
Sbjct: 282 VAGMKGE------------------PGIPGTKGEKG---AEGSPGLPGLLGQKGEKGDAG 320
Query: 369 PP---GRGERGEPGAPGPKGKQGESGTRG---PKGSKGDRGEKGDSGAQGPRGPPGQKGD 422
GRGE G PG PGP G +GE+G G P G GD+GE+G +G QGP GP G KG+
Sbjct: 321 NSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGERGAAGEQGPDGPKGSKGE 380
Query: 423 QGATEIIDYNGNLHEALQRITTLTVTGPPG------PPGPQGLQGPKGEQGSPGIPGMDG 476
G E++DYNGN++EALQ I TL + GPPG PPG G+ G KGE G PG PG DG
Sbjct: 381 PGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDG 440
Query: 477 EQGLKGSKGDMGDPGMTGE---------KGGIGLPGLPGANGMKGEKGDSGMPGPQG--- 524
E+G +G GDMG PG G KG G PG PG G KGE G +G PG +G
Sbjct: 441 EKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAG 500
Query: 525 ------------PSIIGPPGPPGPHGPPGPMGPHGL------------------------ 548
P GPPGPPG G PGP G GL
Sbjct: 501 EKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGA 560
Query: 549 ------PGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGP 602
PGP GT GP+G GPAGPKGERG KG G GP G GLPG G PG G G
Sbjct: 561 SGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGE 620
Query: 603 RGEKGDLGEKGEK--VTSPSQHVPC 625
RG+KG G KG+K +P PC
Sbjct: 621 RGKKGSRGPKGDKGDQGAPGLDAPC 645
Score = 156 bits (395), Expect = 5e-38
Identities = 96/225 (42%), Positives = 114/225 (50%), Gaps = 37/225 (16%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPG---PKGDKGEQGDQG-PRMVFPKINHGFLSAD 178
GPPG G++G RG+ G G PGPQGPPG P G KGE G G P K G +
Sbjct: 434 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSP 493
Query: 179 QQLIKRRLIKGDQGQAGPPGP-----PGPPGPRGPPGDTGKDGPRG---MPGVPGEPGKP 230
+ KG+ G+ G PG PGP GP GPPG G GP+G + G GE G
Sbjct: 494 GE-------KGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 546
Query: 231 GEQGLMGPLGPPGQKGSIGAPGIPGM---------------NGQKGEPGLPGAVGQNGIP 275
GE+G GPLG PG G G PG PG G KG+PG+ G G G+P
Sbjct: 547 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP 606
Query: 276 ---GPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPG 317
GP G+ G +GE+G G GPKGD G++G PG A GE G
Sbjct: 607 GLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDG 651
Score = 141 bits (355), Expect = 2e-33
Identities = 96/229 (41%), Positives = 111/229 (48%), Gaps = 40/229 (17%)
Query: 427 EIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGD 486
+++D LH +R T G PP QG G +G G PG G+DG+ G G KGD
Sbjct: 94 QLLDEKWKLHSRRRREAPKTSPGCNCPPVFQGQPGTRGFPGFPGPIGLDGKPGHPGPKGD 153
Query: 487 MGDPGMTGEKGGIGLPGLPGANGMKGEKGDSG---------------MPGP-------QG 524
MG +TG PG PG G KGEKG G P P QG
Sbjct: 154 MG---LTGP------PGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAPPPVIKRRTFQG 204
Query: 525 P----SIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPG 580
SI GPPGPPGP GP GP+G GLPGP G P G GP GPKG+ G +G G G
Sbjct: 205 EQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMG---PPGLPGPPGPKGDPGIQGYHGRKG 261
Query: 581 PRGPYGLPGKDGEPGLDGFP--GPRGEKGDLGEKGEKVTSPSQHVPCLI 627
RG G+PGK G G G G +GE G G KGEK S +P L+
Sbjct: 262 ERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLL 310
>gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens]
Length = 690
Score = 417 bits (1072), Expect = e-116
Identities = 275/697 (39%), Positives = 332/697 (47%), Gaps = 157/697 (22%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQG 147
+ +V +LL +K H + R A + CNCP P +G GR PG PG +G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP---PAFQGPTGR------PGLPGDKG 137
Query: 148 PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRG 207
G G G GD G ++ P+ G GQ G G PG PGP G
Sbjct: 138 AIGMPGRVGSPGDAGLSIIGPR-------------------GPPGQPGTRGFPGFPGPIG 178
Query: 208 PPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQ----------------------- 244
G G GP+G G+ G PG+PG QG G G G+
Sbjct: 179 LDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALK 238
Query: 245 ------------------------------KGSIGAPGIPGMNGQKGEPGLPGAVGQNGI 274
+G G PG PG +G G PGLPG +G G+
Sbjct: 239 LLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGL 298
Query: 275 ---PGPKGEPGEQ---GEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEP 328
PGPKG+PG Q G KG+ G G G G KG PG + AG+KGEPG G G+KG
Sbjct: 299 PGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAE 358
Query: 329 GLPGLPGLPGIKGEPG-----FIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGP 383
G PGLPGL G KGE G G +GEPG PGLPG G +GEAG G+ G PG PG
Sbjct: 359 GSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVD--GQVGPPGQPGD 416
Query: 384 KGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRIT 443
KG++G +G +GP G KG +GE G KG E++DYNGN++EALQ I
Sbjct: 417 KGERGAAGEQGPDGPKGSKGEPG-------------KG-----EMVDYNGNINEALQEIR 458
Query: 444 TLTVTGPP------GPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGE-- 495
TL + GPP GPPG G+ G KGE G PG PG DGE+G +G GDMG PG G
Sbjct: 459 TLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPG 518
Query: 496 -------KGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGL 548
KG G PG PG G KGE G +G P P P GPPGPPG G PGP G GL
Sbjct: 519 KDGPPGVKGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGVPGPKGEAGL 578
Query: 549 PGPK------------------GTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGK 590
G K GT GP+G GPAGPKGERG KG G GP G GLPG
Sbjct: 579 DGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGL 638
Query: 591 DGEPGLDGFPGPRGEKGDLGEKGEK--VTSPSQHVPC 625
G PG G G RG+KG G KG+K +P PC
Sbjct: 639 HGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPC 675
Score = 160 bits (405), Expect = 3e-39
Identities = 91/206 (44%), Positives = 110/206 (53%), Gaps = 26/206 (12%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLI 182
GPPG G++G RG+ G G PGPQGPPG G G +G+ G H ++
Sbjct: 491 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENG---------HPGSPGEKGE- 540
Query: 183 KRRLIKGDQGQAGPP-----GPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMG 237
KG+ GQAG P GP GPPGP G G G G G+ G GE G GE+G G
Sbjct: 541 -----KGETGQAGSPVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRG 595
Query: 238 PLGPPGQKGSIGAPGIPGMNGQ---KGEPGLPGAVGQNGIP---GPKGEPGEQGEKGDAG 291
PLG PG G IG PG G G+ KG+PG+ G G G+P GP G+ G +GE+G G
Sbjct: 596 PLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKG 655
Query: 292 ENGPKGDTGEKGDPGSSAAGIKGEPG 317
GPKGD G++G PG A GE G
Sbjct: 656 SRGPKGDKGDQGAPGLDAPCPLGEDG 681
Score = 154 bits (390), Expect = 2e-37
Identities = 109/283 (38%), Positives = 125/283 (44%), Gaps = 41/283 (14%)
Query: 364 RGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQ--GPRGPPGQKG 421
R EA G P GP G+ G G +G G G G GD+G GPRGPPGQ G
Sbjct: 107 RREAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPG 166
Query: 422 DQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLK 481
+G GP G G G GPKG+ G G PG G QG K
Sbjct: 167 TRGFPGF-------------------PGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQK 207
Query: 482 GSKGDMGD----------PGMTGEKGGIGLPGLPGANGMKGE-----KGDSGMPGPQGPS 526
G KG G+ P I L LP N ++ K + S
Sbjct: 208 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 267
Query: 527 IIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYG 586
I GPPGPPGP GP GP+G GLPGP G P G GP GPKG+ G +G G G RG G
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPGPMG---PPGLPGPPGPKGDPGIQGYHGRKGERGMPG 324
Query: 587 LPGKDGEPGLDGFP--GPRGEKGDLGEKGEKVTSPSQHVPCLI 627
+PGK G G G G +GE G G KGEK S +P L+
Sbjct: 325 MPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLL 367
>gi|22027580 alpha 1 type XIII collagen isoform 6 [Homo sapiens]
Length = 702
Score = 416 bits (1070), Expect = e-116
Identities = 276/709 (38%), Positives = 333/709 (46%), Gaps = 169/709 (23%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQG 147
+ +V +LL +K H + R A + CNCP P +G GR PG PG +G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP---PAFQGPTGR------PGLPGDKG 137
Query: 148 PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRG 207
G G G GD G ++ P+ G GQ G G PG PGP G
Sbjct: 138 AIGMPGRVGSPGDAGLSIIGPR-------------------GPPGQPGTRGFPGFPGPIG 178
Query: 208 PPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQ----------------------- 244
G G GP+G G+ G PG+PG QG G G G+
Sbjct: 179 LDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALK 238
Query: 245 ------------------------------KGSIGAPGIPGMNGQKGEPGLPGAVGQNGI 274
+G G PG PG +G G PGLPG +G G+
Sbjct: 239 LLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGL 298
Query: 275 ---PGPKGEPGEQ---GEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEP 328
PGPKG+PG Q G KG+ G G G G KG PG + AG+KGEPG G G+KG
Sbjct: 299 PGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAE 358
Query: 329 GLPGLPGLPGIKGEPG-----FIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGP 383
G PGLPGL G KGE G G +GEPG PGLPG G +GEAG G+ G PG PG
Sbjct: 359 GSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVD--GQVGPPGQPGD 416
Query: 384 KGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRIT 443
KG++G +G +GP G KG +GE G KG E++DYNGN++EALQ I
Sbjct: 417 KGERGAAGEQGPDGPKGSKGEPG-------------KG-----EMVDYNGNINEALQEIR 458
Query: 444 TLTVTGPP------GPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGE-- 495
TL + GPP GPPG G+ G KGE G PG PG DGE+G +G GDMG PG G
Sbjct: 459 TLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPG 518
Query: 496 -------KGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGL 548
KG G PG PG G KGE G +G P P P GPPGPPG G PGP G GL
Sbjct: 519 KDGPPGVKGENGHPGSPGEKGEKGETGQAGSPVPGLPGPEGPPGPPGLQGVPGPKGEAGL 578
Query: 549 ------------------------------PGPKGTDGPMGPHGPAGPKGERGEKGAMGE 578
PGP GT GP+G GPAGPKGERG KG G
Sbjct: 579 DGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGM 638
Query: 579 PGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEK--VTSPSQHVPC 625
GP G GLPG G PG G G RG+KG G KG+K +P PC
Sbjct: 639 TGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPC 687
Score = 159 bits (402), Expect = 7e-39
Identities = 94/211 (44%), Positives = 110/211 (52%), Gaps = 24/211 (11%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPG---PKGDKGEQGDQG-PRMVFPKINHGFLSAD 178
GPPG G++G RG+ G G PGPQGPPG P G KGE G G P K G +
Sbjct: 491 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSP 550
Query: 179 QQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGK------PGE 232
+ G G GPPGPPG G GP G+ G DG +G G GE G PG
Sbjct: 551 --------VPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGA 602
Query: 233 QGLMGPLGPPGQKGSIGAPGIPGMNGQ---KGEPGLPGAVGQNGIP---GPKGEPGEQGE 286
GL G GPPG G IG PG G G+ KG+PG+ G G G+P GP G+ G +GE
Sbjct: 603 SGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGE 662
Query: 287 KGDAGENGPKGDTGEKGDPGSSAAGIKGEPG 317
+G G GPKGD G++G PG A GE G
Sbjct: 663 RGKKGSRGPKGDKGDQGAPGLDAPCPLGEDG 693
Score = 154 bits (390), Expect = 2e-37
Identities = 109/283 (38%), Positives = 125/283 (44%), Gaps = 41/283 (14%)
Query: 364 RGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQ--GPRGPPGQKG 421
R EA G P GP G+ G G +G G G G GD+G GPRGPPGQ G
Sbjct: 107 RREAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPG 166
Query: 422 DQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLK 481
+G GP G G G GPKG+ G G PG G QG K
Sbjct: 167 TRGFPGF-------------------PGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQK 207
Query: 482 GSKGDMGD----------PGMTGEKGGIGLPGLPGANGMKGE-----KGDSGMPGPQGPS 526
G KG G+ P I L LP N ++ K + S
Sbjct: 208 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 267
Query: 527 IIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYG 586
I GPPGPPGP GP GP+G GLPGP G P G GP GPKG+ G +G G G RG G
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPGPMG---PPGLPGPPGPKGDPGIQGYHGRKGERGMPG 324
Query: 587 LPGKDGEPGLDGFP--GPRGEKGDLGEKGEKVTSPSQHVPCLI 627
+PGK G G G G +GE G G KGEK S +P L+
Sbjct: 325 MPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLL 367
>gi|22027589 alpha 1 type XIII collagen isoform 9 [Homo sapiens]
Length = 688
Score = 415 bits (1067), Expect = e-116
Identities = 277/703 (39%), Positives = 329/703 (46%), Gaps = 171/703 (24%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQG 147
+ +V +LL +K H + R A + CNCP P +G GR G G PG G G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP---PAFQGPTGRPGLPGQPGTRGFPG 143
Query: 148 PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRG 207
PGP G G+ G GP KGD G GPPG PGP G +G
Sbjct: 144 FPGPIGLDGKPGHPGP------------------------KGDMGLTGPPGQPGPQGQKG 179
Query: 208 PPGDTGKDGPR----GMPGV-------------------------------PGEPGKPGE 232
G G+ R MP GE +
Sbjct: 180 EKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQASI 239
Query: 233 QGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQG---EKGD 289
QG GP GPPG G +G PG+PG G PGLPG PGPKG+PG QG KG+
Sbjct: 240 QGPPGPPGPPGPSGPLGHPGLPG---PMGPPGLPGP------PGPKGDPGIQGYHGRKGE 290
Query: 290 AGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPG----- 344
G G G G KG PG + AG+KGEPG G G+KG G PGLPGL G KGE G
Sbjct: 291 RGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQKGEKGDAGNS 350
Query: 345 FIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGE 404
G +GEPG PGLPG G +GEAG G+ G PG PG KG++G +G +GP G KG +GE
Sbjct: 351 IGGGRGEPGPPGLPGPPGPKGEAGVD--GQVGPPGQPGDKGERGAAGEQGPDGPKGSKGE 408
Query: 405 KGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPP------GPPGPQG 458
G KG E++DYNGN++EALQ I TL + GPP GPPG G
Sbjct: 409 PG-------------KG-----EMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPG 450
Query: 459 LQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGE---------KGGIGLPGLPGANG 509
+ G KGE G PG PG DGE+G +G GDMG PG G KG G PG PG G
Sbjct: 451 IPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKG 510
Query: 510 MKGEKGDSGMPGPQG---------------PSIIGPPGPPGPHGPPGPMGPHGL------ 548
KGE G +G PG +G P GPPGPPG G PGP G GL
Sbjct: 511 EKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGE 570
Query: 549 ------------------------PGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGP 584
PGP GT GP+G GPAGPKGERG KG G GP G
Sbjct: 571 KGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGA 630
Query: 585 YGLPGKDGEPGLDGFPGPRGEKGDLGEKGEK--VTSPSQHVPC 625
GLPG G PG G G RG+KG G KG+K +P PC
Sbjct: 631 AGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPC 673
Score = 156 bits (395), Expect = 5e-38
Identities = 96/225 (42%), Positives = 114/225 (50%), Gaps = 37/225 (16%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPG---PKGDKGEQGDQG-PRMVFPKINHGFLSAD 178
GPPG G++G RG+ G G PGPQGPPG P G KGE G G P K G +
Sbjct: 462 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSP 521
Query: 179 QQLIKRRLIKGDQGQAGPPGP-----PGPPGPRGPPGDTGKDGPRG---MPGVPGEPGKP 230
+ KG+ G+ G PG PGP GP GPPG G GP+G + G GE G
Sbjct: 522 GE-------KGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 574
Query: 231 GEQGLMGPLGPPGQKGSIGAPGIPGM---------------NGQKGEPGLPGAVGQNGIP 275
GE+G GPLG PG G G PG PG G KG+PG+ G G G+P
Sbjct: 575 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP 634
Query: 276 ---GPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPG 317
GP G+ G +GE+G G GPKGD G++G PG A GE G
Sbjct: 635 GLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDG 679
Score = 138 bits (347), Expect = 2e-32
Identities = 98/251 (39%), Positives = 110/251 (43%), Gaps = 56/251 (22%)
Query: 427 EIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGD 486
+++D LH +R T PG P QGP G G PG PG G G G G
Sbjct: 94 QLLDEKWKLHSRRRREAPKT---SPGCNCPPAFQGPTGRPGLPGQPGTRGFPGFPGPIGL 150
Query: 487 MGDPGMTGEKGGIGL---PGLPGANGMKGEKGDSG------------------------- 518
G PG G KG +GL PG PG G KGEKG G
Sbjct: 151 DGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKL 210
Query: 519 ---------MPGP-------QGP----SIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPM 558
P P QG SI GPPGPPGP GP GP+G GLPGP G P
Sbjct: 211 LPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMG---PP 267
Query: 559 GPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP--GPRGEKGDLGEKGEKV 616
G GP GPKG+ G +G G G RG G+PGK G G G G +GE G G KGEK
Sbjct: 268 GLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKG 327
Query: 617 TSPSQHVPCLI 627
S +P L+
Sbjct: 328 AEGSPGLPGLL 338
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 415 bits (1066), Expect = e-116
Identities = 244/547 (44%), Positives = 284/547 (51%), Gaps = 46/547 (8%)
Query: 113 EAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINH 172
E P P GP G G GR G G PG PGP GPPGP G G G+ P++ ++
Sbjct: 111 EGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQL-----SY 165
Query: 173 GFLSADQQLIKRRLIKGDQGQAGP---PGPPGPPGPRG---PPGDTGKDG------PRGM 220
G+ D++ + G G +GP PGPPG PGP+G PPG+ G+ G PRG
Sbjct: 166 GY---DEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGP 222
Query: 221 PGVPG------EPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGI 274
PG PG E GKPG G GP GP G +G G G+PGM G +G GL GA G G
Sbjct: 223 PGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGP 282
Query: 275 PGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGS-SAAGIKGEPGESGRPGQKGEPGLPGL 333
GPKGEPG GE G G+ GP+G GE+G PG+ AG +G G +G G G G G
Sbjct: 283 AGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGP 342
Query: 334 PGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPG-RGERGEPGAPGPKGKQGESGT 392
PG PG G G GPQG G G G +GE G GP G G G PGA G G +G +G
Sbjct: 343 PGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGA 402
Query: 393 RGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPG 452
G G+ G G +G SG QGP GPPG KG+ G G+ A + V GPPG
Sbjct: 403 PGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDT-GAKGEPGPVGVQGPPG 461
Query: 453 P------------PGPQGLQGPKGEQGSP---GIPGMDGEQGLKGSKGDMGDPGMTGEKG 497
P PGP GL GP GE+G P G PG DG G KG G+ G PG G KG
Sbjct: 462 PAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKG 521
Query: 498 GIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGP 557
G G PG G+ G KG +G PG GP G GPPGP G G GP G PG +G G
Sbjct: 522 SPGEAGRPGEAGLPGAKGLTGSPGSPGPD--GKTGPPGPAGQDGRPGPPGPPGARGQAGV 579
Query: 558 MGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKVT 617
MG GP G GE G+ G G PGP G G GKDGE G G PGP G G+ GE+G +
Sbjct: 580 MGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGS 639
Query: 618 SPSQHVP 624
Q +P
Sbjct: 640 PGFQGLP 646
Score = 404 bits (1038), Expect = e-112
Identities = 244/570 (42%), Positives = 280/570 (49%), Gaps = 103/570 (18%)
Query: 112 REAPSECNCPA--GPPGKRGKRGRRGESGPPGQPGPQGPPG---PKGDKGEQGDQGPRMV 166
R P E P GP G RG G G +GPPG GP GPPG G KGE G QGPR
Sbjct: 304 RGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGS 363
Query: 167 FPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGP------RGM 220
+G QG G PGPPGP G GP G+ G DG G
Sbjct: 364 ---------------------EGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGA 402
Query: 221 PGVPGEPGKPGEQGLMGPLGP---PGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGP 277
PG+ G PG PG +G GP GP PG KG+ G PG PG G G G PG VG G PGP
Sbjct: 403 PGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGP 462
Query: 278 KGEPGEQGEKGDAGENGPKGDTGEKGDPGSSA-------------AGIKGEPGESG---R 321
GE G++G +G+ G G G GE+G PGS AG +G PG +G
Sbjct: 463 AGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGS 522
Query: 322 PGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPG-RGERGEPGA 380
PG+ G PG GLPG G+ G PG GP G+ G PG G G G GPPG RG+ G G
Sbjct: 523 PGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGF 582
Query: 381 PGPKG------KQGESGTRGPKGSKGDRGEKGDSGAQGP---RGPPGQKGDQGATEIIDY 431
PGPKG K GE G GP G+ G G+ G++GAQGP GP G++G+QG +
Sbjct: 583 PGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGF 642
Query: 432 NGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPG 491
G A GPPG G G QG G+ G+PG G GE+G G +G G PG
Sbjct: 643 QGLPGPA----------GPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPG 692
Query: 492 MTGEKGGIGLPG------------------LPGANGMKGEKGDSGMPGPQGPSIIGPPGP 533
G +G G PG PG GM GE+G +G+PGP+G G GP
Sbjct: 693 PAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDR--GDAGP 750
Query: 534 PGPHGPPGPMGPHGLPGPKGTDGPMG---------PHGPAGPKGERGEKGAMGEPGPRGP 584
G G PG G GL GP G GP G P GPAGP G RG G GEPGP GP
Sbjct: 751 KGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGP 810
Query: 585 YGLPGKDGEPGLDGFPGPRGEKGDLGEKGE 614
G G PG DG PG +GE GD G KG+
Sbjct: 811 AGFAGP---PGADGQPGAKGEPGDAGAKGD 837
Score = 397 bits (1019), Expect = e-110
Identities = 234/544 (43%), Positives = 268/544 (49%), Gaps = 64/544 (11%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGP---------------PGPKGDKGEQGDQGPRM 165
P GP G+ GKRG RGE GP G PGP G GPKG GE+G GP
Sbjct: 459 PPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGP-- 516
Query: 166 VFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPG 225
PK + G + + G +G G PG PGP G GPPG G+DG G PG PG
Sbjct: 517 AGPKGSPGEAGRPGEAG----LPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPG 572
Query: 226 EPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQG 285
G+ G G GP G G+ G G G+PG G G G G G G PGP G GE+G
Sbjct: 573 ARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERG 632
Query: 286 EKGDAGENGPKGDTGEKGDPGSSA-AGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPG 344
E+G AG G +G G G PG + G +G PG+ G PG G G G PG G++G PG
Sbjct: 633 EQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPG 692
Query: 345 FIGPQGEPGLPGLPGTKGERGEAGPPGR----------GERGEPGAPGPKGKQGESGTRG 394
GP+G G PG G KG+ G G PG GERG G PGPKG +G++G +G
Sbjct: 693 PAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKG 752
Query: 395 PKGSKGDRGEKGDSGAQGPRGP---PGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPP 451
GS G G +G +G GP GP PG KG+ G + G R G P
Sbjct: 753 ADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDR-------GEP 805
Query: 452 GPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMK 511
GPPGP G GP G G PG G G+ G KG G G G G G IG G PGA G +
Sbjct: 806 GPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGAR 865
Query: 512 GEKGD---------SGMPGPQGPS-IIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPH 561
G G +G GP GPS GPPGPPGP G G GP G GP G G +GP
Sbjct: 866 GSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPP 925
Query: 562 GPAGPKGERGE------KGAMGEPGP------RGPYGLPGKDGEPGLDGFPGPRGEKGDL 609
GP GP GE+G GA G PGP RG GLPG+ GE G G PGP GE G
Sbjct: 926 GPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQ 985
Query: 610 GEKG 613
G G
Sbjct: 986 GPSG 989
Score = 396 bits (1017), Expect = e-110
Identities = 240/561 (42%), Positives = 271/561 (48%), Gaps = 76/561 (13%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLI 182
GPPG G G RGE GP G PG QG PGP G GE G G + V G L A
Sbjct: 620 GPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGV-----PGDLGAPGPSG 674
Query: 183 KR--RLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 240
R R G++G GPPGP GP G G PG+ G G G PG PG G PG QG+ G G
Sbjct: 675 ARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERG 734
Query: 241 P---PGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGP-- 295
PG KG G G G +G G+ G+ G G G PGP G PG++GE G +G GP
Sbjct: 735 AAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTG 794
Query: 296 -KGDTGEKGDPGSSA-AGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPG 353
+G G++G+PG AG G PG G+PG KGEPG G G G G G GP G G
Sbjct: 795 ARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIG 854
Query: 354 LPGLPGTKGERGEAGPPGR----------------GERGEPGAPGPKGKQGESGTRG--- 394
G PG KG RG AGPPG G G PG PGP GK+G G RG
Sbjct: 855 NVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETG 914
Query: 395 ---------PKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATE---IIDYNGNLHE----- 437
P G G GEKG GA GP G PG G QG ++ G E
Sbjct: 915 PAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPG 974
Query: 438 --------ALQRITTLT-VTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGS---KG 485
Q + + GPPGP GP GL GP GE G G PG +G G GS KG
Sbjct: 975 LPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKG 1034
Query: 486 DMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGP 545
D G+ G G G G PG PG G G+ GD G GP GP+ GP GP G GP GP GP
Sbjct: 1035 DRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPA--GPVGPVGARGPAGPQGP 1092
Query: 546 HG------------LPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGE 593
G + G +G G GP GP G GE+G GA G GPRGP G G G+
Sbjct: 1093 RGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGK 1152
Query: 594 PGLDGFPGPRGEKGDLGEKGE 614
GL+G PGP G G G G+
Sbjct: 1153 DGLNGLPGPIGPPGPRGRTGD 1173
Score = 384 bits (986), Expect = e-106
Identities = 235/549 (42%), Positives = 265/549 (48%), Gaps = 76/549 (13%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQG-PRMVFPKINHGFLSADQ 179
P GPPG GK G GE+G PG+PG +GPPGP+G +G G G P M K + GF D
Sbjct: 219 PRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGM---KGHRGFSGLDG 275
Query: 180 QLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGK---DGPRGMPGVPGEPGKPGEQGLM 236
KGD G AGP G PG PG G PG G G RG PG PG G G G
Sbjct: 276 A-------KGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGAT 328
Query: 237 GPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPK 296
G GPPG G G PG PG G KGE G G G G G +GEPG G G AG G
Sbjct: 329 GAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNP 388
Query: 297 GDTGEKGDPGSSAA-GIKGEPG------------ESGRPGQKG---EPGLPGLPGLPGIK 340
G G+ G G++ A GI G PG G PG KG EPG PG G G K
Sbjct: 389 GADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAK 448
Query: 341 GEPGFIGPQGEPGLPGLPGTKGERGEAGPPGR----GERGEPGAPGPKGKQGESGTRGPK 396
GEPG +G QG PG G G +G RGE GP G GERG PG+ G G G +G +GP
Sbjct: 449 GEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPA 508
Query: 397 GSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGP 456
G +G G G G+ G G PG+ G GA + G+ G GPPGP
Sbjct: 509 GERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGP----------DGKTGPPGP 558
Query: 457 QGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGD 516
G G G G PG G G G G KG G+PG GE+G G PG G G GE G
Sbjct: 559 AGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGA 618
Query: 517 SGMPGPQGPSIIGPPGPPGP---------HGPPGPMGPHGLPGPKGTDGPMGPHGPAGPK 567
G PGP GP+ G G GP GP GP G G PG +G G +G GP+G +
Sbjct: 619 QGPPGPAGPA--GERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGAR 676
Query: 568 GER---GEKGAMGEPGPRGPY------------------GLPGKDGEPGLDGFPGPRGEK 606
GER GE+G G PGP GP G PG G PGL G PG RG
Sbjct: 677 GERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAA 736
Query: 607 GDLGEKGEK 615
G G KG++
Sbjct: 737 GLPGPKGDR 745
Score = 328 bits (841), Expect = 9e-90
Identities = 196/453 (43%), Positives = 224/453 (49%), Gaps = 77/453 (16%)
Query: 111 AREAPSECNCP--------AGPPGKRGKRGRRGE---------SGPPGQPGPQGPPGPKG 153
AR AP + P AGPPG G+ G +GE +GPPG GP GPPGP G
Sbjct: 795 ARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIG 854
Query: 154 DKGEQGDQGPR-MVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDT 212
+ G G +G R P GF A ++ G G AGPPGPPGP G G G
Sbjct: 855 NVGAPGAKGARGSAGPPGATGFPGAAGRVGP----PGPSGNAGPPGPPGPAGKEGGKGPR 910
Query: 213 GKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQN 272
G+ GP G PG G PG PG G G G G G+ G PG G+ GQ+G GLPG G+
Sbjct: 911 GETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGER 970
Query: 273 ---GIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPG 329
G+PGP GEPG+QG G +GE GP G G G+ G PGESGR G G G
Sbjct: 971 GFPGLPGPSGEPGKQGPSGASGERGPPGPMG--------PPGLAGPPGESGREGAPGAEG 1022
Query: 330 LPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKGKQGE 389
PG G PG KG+ G GP G PG PG PG G G AG G+RGE G GP G G
Sbjct: 1023 SPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGK--SGDRGETGPAGPAGPVGP 1080
Query: 390 SGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTG 449
G RGP G +G RG+KG++G QG RG G +G G + G
Sbjct: 1081 VGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSG----------------------LQG 1118
Query: 450 PPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANG 509
PPGPPG G QGP G G G G PG G G GL GLPG G
Sbjct: 1119 PPGPPGSPGEQGP---------------SGASGPAGPRGPPGSAGAPGKDGLNGLPGPIG 1163
Query: 510 MKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGP 542
G +G +G GP +GPPGPPGP GPPGP
Sbjct: 1164 PPGPRGRTGDAGP-----VGPPGPPGPPGPPGP 1191
Score = 301 bits (771), Expect = 1e-81
Identities = 190/459 (41%), Positives = 212/459 (46%), Gaps = 69/459 (15%)
Query: 197 PGPPGPPGPRGPPGDTGKDGPRGMP--GVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIP 254
PG P G P G + P GV G G G +G GP GPPG+ G G PG+P
Sbjct: 82 PGAEVPEGECCPVCPDGSESPTDQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLP 141
Query: 255 GMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKG 314
G G PGP G PG G G EK G S G G
Sbjct: 142 GPPGP---------------PGPPGPPGLGGNFAPQLSYG----YDEKSTGGISVPGPMG 182
Query: 315 EPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGR-G 373
G G PG G PG G G PG GEPG GP G G PG PG G+ GEAG PGR G
Sbjct: 183 PSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPG 242
Query: 374 ERGEPGAPGPK---------------------GKQGESGTRGPKGSKGDRGEKGDSGAQG 412
ERG PG G + G +G++G GPKG G GE G G G
Sbjct: 243 ERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMG 302
Query: 413 PRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIP 472
PRG PG++G GA GN TG GPPGP G GP G G+ G
Sbjct: 303 PRGLPGERGRPGAPGPAGARGN----------DGATGAAGPPGPTGPAGPPGFPGAVGAK 352
Query: 473 GMDGEQGLKGSKGDM---GDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPG----PQGP 525
G G QG +GS+G G+PG G G G G PGA+G G KG +G PG P P
Sbjct: 353 GEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFP 412
Query: 526 SIIGPPGPPGPHGPPGPMGPHGLP---------GPKGTDGPMGPHGPAGPKGERGEKGAM 576
GP GP GP GPPGP G G P G KG GP+G GP GP GE G++GA
Sbjct: 413 GARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGAR 472
Query: 577 GEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEK 615
GEPGP G G PG+ G PG GFPG G G G GE+
Sbjct: 473 GEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGER 511
Score = 246 bits (627), Expect = 6e-65
Identities = 140/325 (43%), Positives = 172/325 (52%), Gaps = 25/325 (7%)
Query: 109 RIAREAPSECNCPAGPPG---KRGKRGRRGESGP---PGQPGPQGPPGPKGDKGEQGDQG 162
R+ PS P GPPG K G +G RGE+GP PG+ GP GPPGP G+KG G G
Sbjct: 882 RVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADG 941
Query: 163 PRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGP---PGDTGKDGPRG 219
P ++ + ++ +G++G G PGP G PG +GP G+ G GP G
Sbjct: 942 PAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMG 1001
Query: 220 MPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKG 279
PG+ G PG+ G +G G G PG+ GS GA G G G G PG PGA G G GP G
Sbjct: 1002 PPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAG 1061
Query: 280 EPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGI 339
+ G++GE G AG GP G G +G G G +G+ GE+G G + GI
Sbjct: 1062 KSGDRGETGPAGPAGPVGPVGARGPAGPQ--GPRGDKGETGEQGDR------------GI 1107
Query: 340 KGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSK 399
KG GF G QG PG PG PG +G G +GP G RG PG+ G GK G +G GP G
Sbjct: 1108 KGHRGFSGLQGPPGPPGSPGEQGPSGASGP--AGPRGPPGSAGAPGKDGLNGLPGPIGPP 1165
Query: 400 GDRGEKGDSGAQGPRGPPGQKGDQG 424
G RG GD+G GP GPPG G G
Sbjct: 1166 GPRGRTGDAGPVGPPGPPGPPGPPG 1190
Score = 220 bits (561), Expect = 3e-57
Identities = 129/306 (42%), Positives = 150/306 (49%), Gaps = 30/306 (9%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPG---PQGPPGPKGDKGEQGDQGPR------------- 164
P GP GK G +G RGE+GP G+PG P GPPGP G+KG G GP
Sbjct: 897 PPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAG 956
Query: 165 ------MVFPKINHGF--LSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDG 216
+ + GF L ++ G G+ GPPGP GPPG GPPG++G++G
Sbjct: 957 QRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREG 1016
Query: 217 PRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPG 276
G G PG G PG +G G GP G G+ GAPG PG G G+ G G G G G
Sbjct: 1017 APGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAG 1076
Query: 277 PKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGL 336
P G G +G G G G KG+TGE+GD GIKG G SG G G PG PG G
Sbjct: 1077 PVGPVGARGPAGPQGPRGDKGETGEQGD-----RGIKGHRGFSGLQGPPGPPGSPGEQGP 1131
Query: 337 PGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPG-RGERGEPGAPGPKGKQGESGTRGP 395
G G G GP G G PG G G G GPPG RG G+ G GP G G G GP
Sbjct: 1132 SGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGP 1191
Query: 396 KGSKGD 401
+ D
Sbjct: 1192 PSAGFD 1197
>gi|22027587 alpha 1 type XIII collagen isoform 8 [Homo sapiens]
Length = 705
Score = 412 bits (1060), Expect = e-115
Identities = 276/712 (38%), Positives = 334/712 (46%), Gaps = 172/712 (24%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQG 147
+ +V +LL +K H + R A + CNCP P +G GR PG PG +G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP---PAFQGPTGR------PGLPGDKG 137
Query: 148 PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRG 207
G G G GD G ++ P+ G GQ G G PG PGP G
Sbjct: 138 AIGMPGRVGSPGDAGLSIIGPR-------------------GPPGQPGTRGFPGFPGPIG 178
Query: 208 PPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQ----------------------- 244
G G GP+G G+ G PG+PG QG G G G+
Sbjct: 179 LDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALK 238
Query: 245 ------------------------------KGSIGAPGIPGMNGQKGEPGLPGAVGQNGI 274
+G G PG PG +G G PGLPG +G G+
Sbjct: 239 LLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGL 298
Query: 275 ---PGPKGEPGEQ---GEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEP 328
PGPKG+PG Q G KG+ G G G G KG PG + AG+KGEPG G G+KG
Sbjct: 299 PGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAE 358
Query: 329 GLPGLPGLPGIKGEPG-----FIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGP 383
G PGLPGL G KGE G G +GEPG PGLPG G +GEAG G+ G PG PG
Sbjct: 359 GSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVD--GQVGPPGQPGD 416
Query: 384 KGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRIT 443
KG++G +G +GP G KG +GE G KG E++DYNGN++EALQ I
Sbjct: 417 KGERGAAGEQGPDGPKGSKGEPG-------------KG-----EMVDYNGNINEALQEIR 458
Query: 444 TLTVTGPP------GPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGE-- 495
TL + GPP GPPG G+ G KGE G PG PG DGE+G +G GDMG PG G
Sbjct: 459 TLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPG 518
Query: 496 -------KGGIGLPGLPGANGMKGEKGDSGMPGPQG---------------PSIIGPPGP 533
KG G PG PG G KGE G +G PG +G P GPPGP
Sbjct: 519 KDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGP 578
Query: 534 PGPHGPPGPMGPHGLPGPK------------------GTDGPMGPHGPAGPKGERGEKGA 575
PG G PGP G GL G K GT GP+G GPAGPKGERG KG
Sbjct: 579 PGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGD 638
Query: 576 MGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEK--VTSPSQHVPC 625
G GP G GLPG G PG G G RG+KG G KG+K +P PC
Sbjct: 639 PGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPC 690
Score = 158 bits (400), Expect = 1e-38
Identities = 94/213 (44%), Positives = 112/213 (52%), Gaps = 25/213 (11%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPG---PKGDKGEQGDQG-PRMVFPKINHGFLSAD 178
GPPG G++G RG+ G G PGPQGPPG P G KGE G G P K G +
Sbjct: 491 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSP 550
Query: 179 QQLIKRRLIKGDQGQAGPPG--------PPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKP 230
+ KG+ G+ G PG P GPPGP G G G G G+ G GE G
Sbjct: 551 GE-------KGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 603
Query: 231 GEQGLMGPLGPPGQKGSIGAPGIPGMNGQ---KGEPGLPGAVGQNGIP---GPKGEPGEQ 284
GE+G GPLG PG G IG PG G G+ KG+PG+ G G G+P GP G+ G +
Sbjct: 604 GEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNR 663
Query: 285 GEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPG 317
GE+G G GPKGD G++G PG A GE G
Sbjct: 664 GERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDG 696
Score = 154 bits (390), Expect = 2e-37
Identities = 109/283 (38%), Positives = 125/283 (44%), Gaps = 41/283 (14%)
Query: 364 RGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQ--GPRGPPGQKG 421
R EA G P GP G+ G G +G G G G GD+G GPRGPPGQ G
Sbjct: 107 RREAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPG 166
Query: 422 DQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLK 481
+G GP G G G GPKG+ G G PG G QG K
Sbjct: 167 TRGFPGF-------------------PGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQK 207
Query: 482 GSKGDMGD----------PGMTGEKGGIGLPGLPGANGMKGE-----KGDSGMPGPQGPS 526
G KG G+ P I L LP N ++ K + S
Sbjct: 208 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 267
Query: 527 IIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYG 586
I GPPGPPGP GP GP+G GLPGP G P G GP GPKG+ G +G G G RG G
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPGPMG---PPGLPGPPGPKGDPGIQGYHGRKGERGMPG 324
Query: 587 LPGKDGEPGLDGFP--GPRGEKGDLGEKGEKVTSPSQHVPCLI 627
+PGK G G G G +GE G G KGEK S +P L+
Sbjct: 325 MPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLL 367
>gi|148536825 alpha 1 type IV collagen preproprotein [Homo sapiens]
Length = 1669
Score = 412 bits (1059), Expect = e-115
Identities = 252/574 (43%), Positives = 298/574 (51%), Gaps = 85/574 (14%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLI 182
GP G G G +G+ G PG GP+G PG KGDKG+ G G K++ G +
Sbjct: 894 GPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQ---- 949
Query: 183 KRRLIKGDQGQAGPPGPPGPPGPRGPPGDTG---KDGPRGMPGVPGEPGKPGEQGLMGPL 239
KGDQG+ G GP G G RG PG G KDG G PG PG G PG G G
Sbjct: 950 -----KGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAP 1004
Query: 240 GPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQG-------------- 285
G PG KGS+G G+PG G+KG PG+PG G G+PG KG GE+G
Sbjct: 1005 GLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRG 1064
Query: 286 EKGDAGENGPKGDTGEKGDPGS-------SAAGIKGEPGE------SGRPGQKGEPGLPG 332
EKGD G G G GEKG+ GS + G+KG PG G PG+KG+ GLPG
Sbjct: 1065 EKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPG 1124
Query: 333 LPGLPGIKGE------PGFIGP---QGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGP 383
L G+PG+KGE PG GP +GEPG G+PG+ GE+GE G PGRG G PGA G
Sbjct: 1125 LDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGD 1184
Query: 384 KGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRIT 443
KG +GE G G GS G G KG+ G GP GP GQ G G+ Q
Sbjct: 1185 KGSKGEVGFPGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQP 1244
Query: 444 TLT-VTGPPGPPGPQGLQGPKGEQGSPG------IPGMDGEQGLKGSKGDMGDPGMTGEK 496
L + GP GPPG G+ G KG++G+PG +PG G+ G +G G G PG+TG K
Sbjct: 1245 GLPGLPGPMGPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSK 1304
Query: 497 GGIGLPG---------LPGANGMKGEKGDSGMPGPQG-PSIIGPPGP----------PGP 536
G +G PG LPG G+KG++GD G+PG +G P GPPGP PGP
Sbjct: 1305 GDMGPPGVPGFQGPKGLPGLQGIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPGLPGP 1364
Query: 537 HGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKG------ERGEKGAMGEPGPRGPYGLPGK 590
GPPG G GLPGPKG G G G GP G G+KG MG GP GP G PG
Sbjct: 1365 EGPPGLKGLQGLPGPKGQQGVTGLVGIPGPPGIPGFDGAPGQKGEMGPAGPTGPRGFPGP 1424
Query: 591 DGEPGLDGFPGPRGEKGDLG-EKGEKVTSPSQHV 623
PG DG PG G G + G VT SQ +
Sbjct: 1425 ---PGPDGLPGSMGPPGTPSVDHGFLVTRHSQTI 1455
Score = 387 bits (994), Expect = e-107
Identities = 248/576 (43%), Positives = 292/576 (50%), Gaps = 122/576 (21%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPG-----PKGDKGEQGDQGPRMVFPKINHGFLSA 177
GPPG +G RG E GPPG PG G PG P G +G G QGP
Sbjct: 773 GPPGLQGIRG---EPGPPGLPGSVGSPGVPGIGPPGARGPPGGQGP-------------- 815
Query: 178 DQQLIKRRLIKGDQGQAG-----PPGPPGPPGPRGPPGDTGKDGPRGMPG---VPGEPGK 229
L IKG++G G PGP G G +G PG TG+ G G+PG PG PG
Sbjct: 816 -PGLSGPPGIKGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGF 874
Query: 230 PGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGE------ 283
PG +G MG +G PGQ GS G G PG+ G+KG+ G PG+ G G PG KG+ G+
Sbjct: 875 PGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGK 934
Query: 284 ------------QGEKGDAGENG---PKGDTGEKGDPGSSA-------AGIKGEPGESGR 321
+G+KGD GE G P G+ G +GDPG+ AG G+PG G
Sbjct: 935 PGSMDKVDMGSMKGQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGD 994
Query: 322 PGQKGEPGLPGLPG------------LPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGP 369
PG G PG PGLPG PG KG PG GPQG PGLPG G KGE+G+AGP
Sbjct: 995 PGISGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGP 1054
Query: 370 PG------RGERGE------PGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPP 417
PG RGE+G+ PG+PG KG++G G G GS G +G G G G G P
Sbjct: 1055 PGIGIPGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLP 1114
Query: 418 GQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGE 477
G+KGD+G + G EA G PG PGP G G KGE GS GIPG GE
Sbjct: 1115 GEKGDKGLPGLDGIPGVKGEA----------GLPGTPGPTGPAGQKGEPGSDGIPGSAGE 1164
Query: 478 QGL-----------------KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMP 520
+G KGSKG++G PG+ G PG+PG+ KGE+G G P
Sbjct: 1165 KGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGS------PGIPGS---KGEQGFMGPP 1215
Query: 521 GPQG-PSIIGPPG--PPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMG 577
GPQG P + G PG GP G GP G GLPG G GP G G G KG++G G G
Sbjct: 1216 GPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPGLPGIDGVKGDKGNPGWPG 1275
Query: 578 EPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKG 613
PG GP G PG G PG+ G PG G KGD+G G
Sbjct: 1276 APGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPG 1311
Score = 375 bits (964), Expect = e-104
Identities = 235/567 (41%), Positives = 283/567 (49%), Gaps = 95/567 (16%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGP--QGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 180
G PG G+ G GE G GQPG GPPGPKG G GD GP
Sbjct: 667 GFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGT-------------- 712
Query: 181 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 240
G G G PG PG G +G PG G G +G+PG+PG PG PGE+G +G G
Sbjct: 713 -------PGRPGFNGLPGNPGVQGQKGEPG-VGLPGLKGLPGLPGIPGTPGEKGSIGVPG 764
Query: 241 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPG-----PKGEPGEQGEKGDAGENGP 295
PG+ G+IG PG+ G+ G+ G PGLPG+VG G+PG +G PG QG G +G G
Sbjct: 765 VPGEHGAIGPPGLQGIRGEPGPPGLPGSVGSPGVPGIGPPGARGPPGGQGPPGLSGPPGI 824
Query: 296 KGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLP 355
KG+ G G PG G KG+ G G PG G+ GLPGLPG G G PGF G +GE G+
Sbjct: 825 KGEKGFPGFPGLDMPGPKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVM 884
Query: 356 GLPGTKGERGEAGPPGR-GERGEPGAPGPKGKQGESGTRGPKGSKG-------------- 400
G PG G G G PG GE+G+ G PG G +G+ G +G KG G
Sbjct: 885 GTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMG 944
Query: 401 -DRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGP--- 456
+G+KGD G +G GP G+KG +G G +A Q G PGP G
Sbjct: 945 SMKGQKGDQGEKGQIGPIGEKGSRGDPGTPGVPGKDGQAGQ-------PGQPGPKGDPGI 997
Query: 457 ------QGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKG-----------GI 499
GL GPKG G G+PG GE+G+ G G G PG+ G+KG GI
Sbjct: 998 SGTPGAPGLPGPKGSVGGMGLPGTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPGI 1057
Query: 500 GLPGL------------PGANGMKGEKGDSGMPG-PQGPSIIGPPGP---PGPHGPPGPM 543
G+PGL PG+ G KGEKG G+PG P P + G PG PG G PG
Sbjct: 1058 GIPGLRGEKGDQGIAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEK 1117
Query: 544 GPHGL------PGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLD 597
G GL PG KG G G GP GP G++GE G+ G PG G G PG G G
Sbjct: 1118 GDKGLPGLDGIPGVKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGR-GFP 1176
Query: 598 GFPGPRGEKGDLGEKGEKVTSPSQHVP 624
GFPG +G+KG GE G + S +P
Sbjct: 1177 GFPGAKGDKGSKGEVGFPGLAGSPGIP 1203
Score = 371 bits (952), Expect = e-102
Identities = 240/558 (43%), Positives = 270/558 (48%), Gaps = 66/558 (11%)
Query: 115 PSECNCPAGPPGKRGKRGRRG--------ESGPPGQPGPQGPPGPKGDKG---------- 156
P + P G PG+RG++G RG SG G PGP G PGP G G
Sbjct: 378 PGQAGAP-GFPGERGEKGDRGFPGTSLPGPSGRDGLPGPPGSPGPPGQPGYTNGIVECQP 436
Query: 157 -EQGDQGPRMVFPKINH-GFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGK 214
GDQGP + + G + Q + LI G GPPGP GPPG G PG G
Sbjct: 437 GPPGDQGPPGIPGQPGFIGEIGEKGQKGESCLICDIDGYRGPPGPQGPPGEIGFPGQPGA 496
Query: 215 DGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGA-------------PGIPGMNGQKG 261
G RG+PG G G PG QG G +G PG KG G PG PG G G
Sbjct: 497 KGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGEPGEFYFDLRLKGDKGDPGFPGQPGMTG 556
Query: 262 EPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGR 321
G PG G G+PGPKG PG G KG+ G G G G +GD G G G G
Sbjct: 557 RAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDTGPPGPPGYGPAGPIGD 616
Query: 322 PGQKGEPGLPGLPGLPGIKGEPGFI-------GPQGEPGLPGLPGTKGERGEAGPPGR-- 372
GQ G PG PG PGLPG KGEPG I G +G PG PG PG +G+RG G PGR
Sbjct: 617 KGQAGFPGGPGSPGLPGPKGEPGKIVPLPGPPGAEGLPGSPGFPGPQGDRGFPGTPGRPG 676
Query: 373 --GERGE--------PGAPGPKGKQGESGTRGPKGSKGD---RGEKGDSGAQGPRGPP-- 417
GE+G PG PGPKG G G GP G+ G G G+ G QG +G P
Sbjct: 677 LPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGV 736
Query: 418 GQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGE 477
G G +G + G E I V G G GP GLQG +GE G PG+PG G
Sbjct: 737 GLPGLKGLPGLPGIPGTPGEK-GSIGVPGVPGEHGAIGPPGLQGIRGEPGPPGLPGSVGS 795
Query: 478 QGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPH 537
G+ G +G PG G GG G PGL G G+KGEKG G PG P GP G G
Sbjct: 796 PGVPG----IGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMP---GPKGDKGAQ 848
Query: 538 GPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLD 597
G PG G GLPG G G G G G KGE G G G+PG GP G PG GE G
Sbjct: 849 GLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDH 908
Query: 598 GFPGPRGEKGDLGEKGEK 615
GFPG G +GD G KG+K
Sbjct: 909 GFPGSSGPRGDPGLKGDK 926
Score = 367 bits (941), Expect = e-101
Identities = 236/559 (42%), Positives = 274/559 (49%), Gaps = 75/559 (13%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSAD---- 178
G PG G G +G GPPG GP GPPGP G GE+G G PK + G
Sbjct: 182 GTPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPPG 241
Query: 179 ---QQLIKRR---LIKGDQGQAGPP-----------GPPGPPGPRGPPGDTGKDGPRGMP 221
Q ++ + KG++GQ G P G PG PGPRG PG G G +G P
Sbjct: 242 VPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEKGSP 301
Query: 222 GVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGM------NGQKGEPGLPGAVGQNGIP 275
G PGEPG P GL+G GP G+KG G PG PG+ G+KGE G PG G G P
Sbjct: 302 GFPGEPGYP---GLIGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEP 358
Query: 276 GPKGEPGEQGE--------KGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGE 327
GPKG PG G+ G AG G G+ GEKGD G + PG SGR G G
Sbjct: 359 GPKGFPGLPGQPGPPGLPVPGQAGAPGFPGERGEKGDRGFPGTSL---PGPSGRDGLPGP 415
Query: 328 PGLPGLPGLPG-----IKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGR--------GE 374
PG PG PG PG ++ +PG G QG PG+PG PG GE GE G G G
Sbjct: 416 PGSPGPPGQPGYTNGIVECQPGPPGDQGPPGIPGQPGFIGEIGEKGQKGESCLICDIDGY 475
Query: 375 RGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGN 434
RG PG GP G+ G G G KG +G G G +G GP+G PG G GA G
Sbjct: 476 RGPPGPQGPPGEIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAK---GEPGE 532
Query: 435 LHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDP---G 491
+ L+ G PG PG G G G G PG+PG G G G KG+ G P G
Sbjct: 533 FYFDLRLKGDKGDPGFPGQPGMTGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVG 592
Query: 492 MTGEKGGIGLPGLPGAN--GMKGEKGDSGMP-GPQGPSIIGPPGPPGPHGP-PGPMGPHG 547
G +G G PG PG G G+KG +G P GP P + GP G PG P PGP G G
Sbjct: 593 FPGSRGDTGPPGPPGYGPAGPIGDKGQAGFPGGPGSPGLPGPKGEPGKIVPLPGPPGAEG 652
Query: 548 LPGPKGTDGPMGPHGPAGPKGE---RGEKGAMGE--------PGPRGPYGLPGKDGEPGL 596
LPG G GP G G G G GEKGA+G+ PGP+G GLPG G PG
Sbjct: 653 LPGSPGFPGPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGT 712
Query: 597 DGFPGPRGEKGDLGEKGEK 615
G PG G G+ G +G+K
Sbjct: 713 PGRPGFNGLPGNPGVQGQK 731
Score = 366 bits (940), Expect = e-101
Identities = 244/588 (41%), Positives = 281/588 (47%), Gaps = 128/588 (21%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 180
P G PG G +G RG GPPG PG G PGP G G +GD G + H
Sbjct: 119 PPGIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGDPG-----EILGH-------- 165
Query: 181 LIKRRLIKGDQGQAGPPGPPGPP------GPRGPPGDTGKDGPRGMPGVPGEPGK----- 229
+ L+KG++G G PG PGPP GP GPPG TG GP G PG PGE G+
Sbjct: 166 -VPGMLLKGERGFPGIPGTPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSF 224
Query: 230 ------PGEQGLMGPLGPPGQ--------------KGSIGAPGIPGMN--GQKGEPGLPG 267
G+QG+ GP G PGQ KG G PG GM G+KGEPG PG
Sbjct: 225 QGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPG 284
Query: 268 AVGQNGIPGPKGE------PGEQGEKGDAGENGPKGDTGEKGDP-------GSSAAGIKG 314
G+ G G KGE PGE G G G GP+G+ GE G P G+ G KG
Sbjct: 285 PRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKG 344
Query: 315 EPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGR-- 372
E G G PG +GEPG G PGLPG G PG P G+ G PG PG +GE+G+ G PG
Sbjct: 345 ERGYPGTPGPRGEPGPKGFPGLPGQPGPPGLPVP-GQAGAPGFPGERGEKGDRGFPGTSL 403
Query: 373 -GERGEPGAPGPKGKQGESGTRG--------PKGSKGDRGEKGDSGAQGPRGPPGQKGDQ 423
G G G PGP G G G G G GD+G G G G G G+KG +
Sbjct: 404 PGPSGRDGLPGPPGSPGPPGQPGYTNGIVECQPGPPGDQGPPGIPGQPGFIGEIGEKGQK 463
Query: 424 GATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGS 483
G + +I + G GPPGP QGP GE G PG PG G++GL G
Sbjct: 464 GESCLI---------------CDIDGYRGPPGP---QGPPGEIGFPGQPGAKGDRGLPGR 505
Query: 484 KGDMGDPGMTGEKGGIGLPGLPGANG-------MKGEKGDSGMPGPQG-------PSIIG 529
G G PG G G IG PG G G +KG+KGD G PG G P G
Sbjct: 506 DGVAGVPGPQGTPGLIGQPGAKGEPGEFYFDLRLKGDKGDPGFPGQPGMTGRAGSPGRDG 565
Query: 530 PPGPPGPHGPP---------GPMGPHGLPGPKGTDGPMGP--HGPAGP---KGERGEKGA 575
PG PGP G P GP G G PG +G GP GP +GPAGP KG+ G G
Sbjct: 566 HPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDTGPPGPPGYGPAGPIGDKGQAGFPGG 625
Query: 576 MGEPGPRGPYGLPGK----------DGEPGLDGFPGPRGEKGDLGEKG 613
G PG GP G PGK +G PG GFPGP+G++G G G
Sbjct: 626 PGSPGLPGPKGEPGKIVPLPGPPGAEGLPGSPGFPGPQGDRGFPGTPG 673
Score = 364 bits (935), Expect = e-100
Identities = 226/525 (43%), Positives = 263/525 (50%), Gaps = 91/525 (17%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQG-PRMVFPKINHGFLSADQ 179
P G G RG G G G GQ G G PGPKGD G G G P + PK + G +
Sbjct: 961 PIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMG--- 1017
Query: 180 QLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGE------------- 226
+ G G+ G PG PGP G G PGD G G +G G PG
Sbjct: 1018 -------LPGTPGEKGVPGIPGPQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQG 1070
Query: 227 ----PGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPG 282
PG PGE+G G +G PG GS G G PG G G PGLPG G G+PG G PG
Sbjct: 1071 IAGFPGSPGEKGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPG 1130
Query: 283 EQGEKGDAGENGPKGDTGEKGDPGSS----AAGIKGEPGESGR-----PGQKGE------ 327
+GE G G GP G G+KG+PGS +AG KGEPG GR PG KG+
Sbjct: 1131 VKGEAGLPGTPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGE 1190
Query: 328 ---PGLPGLPGLPGIKGEPGFI---GPQGEPGLPGLPG--TKGERGEAGPPGRGERGEPG 379
PGL G PG+PG KGE GF+ GPQG+PGLPG PG T+G +G+ GP +G+ G PG
Sbjct: 1191 VGFPGLAGSPGIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGP--QGQPGLPG 1248
Query: 380 APGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEAL 439
PGP G G G G KG KG+ G G G GP+G PG
Sbjct: 1249 LPGPMGPPGLPGIDGVKGDKGNPGWPGAPGVPGPKGDPG--------------------- 1287
Query: 440 QRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQ---GLKGSKGDMGDPGMTGEK 496
G PG G G+ G KG+ G PG+PG G + GL+G KGD GD G+ G K
Sbjct: 1288 -------FQGMPGIGGSPGITGSKGDMGPPGVPGFQGPKGLPGLQGIKGDQGDQGVPGAK 1340
Query: 497 GGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDG 556
G G PG PG + KG+ G+PGP+ GPPG G G PGP G G+ G G G
Sbjct: 1341 GLPGPPGPPGPYDI--IKGEPGLPGPE-----GPPGLKGLQGLPGPKGQQGVTGLVGIPG 1393
Query: 557 PMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPG 601
P G G G G++GE G G GPRG G PG DG PG G PG
Sbjct: 1394 PPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPPG 1438
Score = 361 bits (926), Expect = 1e-99
Identities = 247/601 (41%), Positives = 287/601 (47%), Gaps = 122/601 (20%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLI 182
G PG +G G GE G PG+PGP+G PG GDKGE+G G FP G+ LI
Sbjct: 264 GEPGFQGMPGV-GEKGEPGKPGPRGKPGKDGDKGEKGSPG----FPG-EPGYPG----LI 313
Query: 183 KRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPP 242
R+ +G++G+AGPPGPPG GP G+ G+ G G PG GEPG G GL G GPP
Sbjct: 314 GRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEPGPKGFPGLPGQPGPP 373
Query: 243 G--QKGSIGAPGIPGMNGQKGEPG-----LPGAVGQNGIPGPKGE--------------- 280
G G GAPG PG G+KG+ G LPG G++G+PGP G
Sbjct: 374 GLPVPGQAGAPGFPGERGEKGDRGFPGTSLPGPSGRDGLPGPPGSPGPPGQPGYTNGIVE 433
Query: 281 -----PGEQGEKGDAGENGPKGDTGEKGDPGSSAA-----GIKGEPGESGRPGQKGEPGL 330
PG+QG G G+ G G+ GEKG G S G +G PG G PG+ G PG
Sbjct: 434 CQPGPPGDQGPPGIPGQPGFIGEIGEKGQKGESCLICDIDGYRGPPGPQGPPGEIGFPGQ 493
Query: 331 PGLP---GLPGIKGEPGFIGPQGEPGLPGLPGTKGERGE--------------------- 366
PG GLPG G G GPQG PGL G PG KGE GE
Sbjct: 494 PGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGEPGEFYFDLRLKGDKGDPGFPGQPG 553
Query: 367 ----AGPPGRGERGEPGAPGPKGKQGE---SGTRGPKGSKGDRGEKGDSGAQGP--RGPP 417
AG PGR G PG PGPKG G G RGP G G G +GD+G GP GP
Sbjct: 554 MTGRAGSPGRD--GHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDTGPPGPPGYGPA 611
Query: 418 GQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGL---------QGPKGEQGS 468
G GD+G G+ + + PGPPG +GL QG +G G+
Sbjct: 612 GPIGDKGQAGFPGGPGSPGLPGPKGEPGKIVPLPGPPGAEGLPGSPGFPGPQGDRGFPGT 671
Query: 469 PGIPGMDGE-----------------QGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMK 511
PG PG+ GE +G+ G GDMG PG G G GLPG PG G K
Sbjct: 672 PGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGTPGRPGFNGLPGNPGVQGQK 731
Query: 512 GE--------KGDSGMPG----PQGPSIIGPPGPPGPH---GPPGPMGPHGLPGPKGTDG 556
GE KG G+PG P IG PG PG H GPPG G G PGP G G
Sbjct: 732 GEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVPGVPGEHGAIGPPGLQGIRGEPGPPGLPG 791
Query: 557 PMGPHG--PAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDG--FPGPRGEKGDLGEK 612
+G G GP G RG G G PG GP G+ G+ G PG G PGP+G+KG G
Sbjct: 792 SVGSPGVPGIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPGPKGDKGAQGLP 851
Query: 613 G 613
G
Sbjct: 852 G 852
Score = 341 bits (875), Expect = 1e-93
Identities = 207/488 (42%), Positives = 248/488 (50%), Gaps = 64/488 (13%)
Query: 189 GDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSI 248
G +GQ G G PG G G PG G +GP+G PG G+ G+PG G G GPPG G
Sbjct: 43 GVKGQKGERGLPGLQGVIGFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYP 102
Query: 249 GAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSS 308
G PG+PG+ GQ G PG PG G NG G +G G G G AG GP G G KGDPG
Sbjct: 103 GNPGLPGIPGQDGPPGPPGIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGDPGEI 162
Query: 309 AAGIKGE--PGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGE 366
+ G GE G PG G PG PGLPGL G G PGF GP G PG PG PG KG+ G
Sbjct: 163 LGHVPGMLLKGERGFPGIPGTPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGL 222
Query: 367 AGPPGRGERGEPGAPGPKG--------KQGESGTRGPKGSKGDR--------GEKGDSGA 410
+ +G++G+ G GP G ++G+ T+G KG KG+ GEKG+ G
Sbjct: 223 SFQGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGK 282
Query: 411 QGPRGPPGQKGDQGATEIIDYNG--NLHEALQRITTLTVTGPPGPPGPQGL------QGP 462
GPRG PG+ GD+G + G + R G GPPGP G+ G
Sbjct: 283 PGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGIVIGTGPLGE 342
Query: 463 KGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTG--EKGGIGLPGLPGANGMKGEKGDSG-- 518
KGE+G PG PG GE G KG G G PG G G G PG PG G KG++G G
Sbjct: 343 KGERGYPGTPGPRGEPGPKGFPGLPGQPGPPGLPVPGQAGAPGFPGERGEKGDRGFPGTS 402
Query: 519 MPGPQG-PSIIGPPGPPGP--------------HGPPGPMGPHGLPGPKGTDGPMGP--- 560
+PGP G + GPPG PGP GPPG GP G+PG G G +G
Sbjct: 403 LPGPSGRDGLPGPPGSPGPPGQPGYTNGIVECQPGPPGDQGPPGIPGQPGFIGEIGEKGQ 462
Query: 561 -------------HGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKG 607
GP GP+G GE G G+PG +G GLPG+D G+ G PGP+G G
Sbjct: 463 KGESCLICDIDGYRGPPGPQGPPGEIGFPGQPGAKGDRGLPGRD---GVAGVPGPQGTPG 519
Query: 608 DLGEKGEK 615
+G+ G K
Sbjct: 520 LIGQPGAK 527
Score = 245 bits (626), Expect = 8e-65
Identities = 159/383 (41%), Positives = 187/383 (48%), Gaps = 61/383 (15%)
Query: 296 KGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLP 355
KG G G+KG+ GE G PG +G G PG+ G G +G PG G GEPGLP
Sbjct: 28 KGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVIGFPGMQGPEGPQGPPGQKGDTGEPGLP 87
Query: 356 GLPGTKGERGEAGPPGR----GERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQ 411
G GT+G G +G PG G G+ G PGP G G +GT+G +G G G G +G
Sbjct: 88 GTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPPGIPGCNGTKGERGPLGPPGLPGFAGNP 147
Query: 412 GPRGPPGQKGDQGATEIIDYNGNLHEALQR--------------------ITTLTVTGPP 451
GP G PG KGD G EI+ + + +R + TGPP
Sbjct: 148 GPPGLPGMKGDPG--EILGHVPGMLLKGERGFPGIPGTPGPPGLPGLQGPVGPPGFTGPP 205
Query: 452 GPPGPQG-----------LQGPKGEQGS------PGIPGM-----DGEQGLKGSKGDMGD 489
GPPGP G QGPKG++G PG+PG G+ KG KG G+
Sbjct: 206 GPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPPGVPGQAQVQEKGDFATKGEKGQKGE 265
Query: 490 PGM-----TGEKGGIGLP---GLPGANGMKGEKGDSGMPGPQG-PSIIGPPGPPGPHGPP 540
PG GEKG G P G PG +G KGEKG G PG G P +IG GP G G
Sbjct: 266 PGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEKGSPGFPGEPGYPGLIGRQGPQGEKGEA 325
Query: 541 GPMGPHGL---PGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLD 597
GP GP G+ GP G G G G GP+GE G KG G PG GP GLP G+ G
Sbjct: 326 GPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEPGPKGFPGLPGQPGPPGLP-VPGQAGAP 384
Query: 598 GFPGPRGEKGDLGEKGEKVTSPS 620
GFPG RGEKGD G G + PS
Sbjct: 385 GFPGERGEKGDRGFPGTSLPGPS 407
Score = 144 bits (364), Expect = 2e-34
Identities = 95/228 (41%), Positives = 105/228 (46%), Gaps = 20/228 (8%)
Query: 111 AREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQG-PRMVFPK 169
A E P P G PG G G G G PG G KGDKG G G P + PK
Sbjct: 1230 ATEGPKGDRGPQGQPGLPGLPGPMGPPGLPGIDGV------KGDKGNPGWPGAPGVPGPK 1283
Query: 170 INHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGK 229
+ GF + I G +G GPPG PG GP+G PG G G +G GVPG G
Sbjct: 1284 GDPGF-QGMPGIGGSPGITGSKGDMGPPGVPGFQGPKGLPGLQGIKGDQGDQGVPGAKGL 1342
Query: 230 PGEQGLMGPL----GPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQG 285
PG G GP G PG G G PG+ G+ G G G G G GIPGP G PG G
Sbjct: 1343 PGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLQGLPGPKGQQGVTGLVGIPGPPGIPGFDG 1402
Query: 286 EKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGL 333
G GE GP G TG +G P G PG G PG G PG P +
Sbjct: 1403 APGQKGEMGPAGPTGPRGFP--------GPPGPDGLPGSMGPPGTPSV 1442
Score = 59.7 bits (143), Expect = 8e-09
Identities = 38/104 (36%), Positives = 44/104 (42%), Gaps = 33/104 (31%)
Query: 121 PAGPPGKRG------KRGRRGESGPPGQPGPQGPPG---PKGDKGEQGDQGPRMVFPKIN 171
P GPPG +G +G++G +G G PGP G PG G KGE G GP
Sbjct: 1364 PEGPPGLKGLQGLPGPKGQQGVTGLVGIPGPPGIPGFDGAPGQKGEMGPAGP-------- 1415
Query: 172 HGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKD 215
G +G GPPGP G PG GPPG D
Sbjct: 1416 ----------------TGPRGFPGPPGPDGLPGSMGPPGTPSVD 1443
>gi|22027565 alpha 1 type XIII collagen isoform 1 [Homo sapiens]
Length = 717
Score = 412 bits (1058), Expect = e-115
Identities = 277/724 (38%), Positives = 335/724 (46%), Gaps = 184/724 (25%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQG 147
+ +V +LL +K H + R A + CNCP P +G GR PG PG +G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP---PAFQGPTGR------PGLPGDKG 137
Query: 148 PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRG 207
G G G GD G ++ P+ G GQ G G PG PGP G
Sbjct: 138 AIGMPGRVGSPGDAGLSIIGPR-------------------GPPGQPGTRGFPGFPGPIG 178
Query: 208 PPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQ----------------------- 244
G G GP+G G+ G PG+PG QG G G G+
Sbjct: 179 LDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALK 238
Query: 245 ------------------------------KGSIGAPGIPGMNGQKGEPGLPGAVGQNGI 274
+G G PG PG +G G PGLPG +G G+
Sbjct: 239 LLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGL 298
Query: 275 ---PGPKGEPGEQ---GEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEP 328
PGPKG+PG Q G KG+ G G G G KG PG + AG+KGEPG G G+KG
Sbjct: 299 PGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAE 358
Query: 329 GLPGLPGLPGIKGEPG-----FIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGP 383
G PGLPGL G KGE G G +GEPG PGLPG G +GEAG G+ G PG PG
Sbjct: 359 GSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVD--GQVGPPGQPGD 416
Query: 384 KGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRIT 443
KG++G +G +GP G KG +GE G KG E++DYNGN++EALQ I
Sbjct: 417 KGERGAAGEQGPDGPKGSKGEPG-------------KG-----EMVDYNGNINEALQEIR 458
Query: 444 TLTVTGPP------GPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGE-- 495
TL + GPP GPPG G+ G KGE G PG PG DGE+G +G GDMG PG G
Sbjct: 459 TLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPG 518
Query: 496 -------KGGIGLPGLPGANGMKGEKGDSGMPGPQG---------------PSIIGPPGP 533
KG G PG PG G KGE G +G PG +G P GPPGP
Sbjct: 519 KDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGP 578
Query: 534 PGPHGPPGPMGPHGL------------------------------PGPKGTDGPMGPHGP 563
PG G PGP G GL PGP GT GP+G GP
Sbjct: 579 PGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGP 638
Query: 564 AGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEK--VTSPSQ 621
AGPKGERG KG G GP G GLPG G PG G G RG+KG G KG+K +P
Sbjct: 639 AGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGL 698
Query: 622 HVPC 625
PC
Sbjct: 699 DAPC 702
Score = 156 bits (395), Expect = 5e-38
Identities = 97/225 (43%), Positives = 116/225 (51%), Gaps = 37/225 (16%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPG---PKGDKGEQGDQG-PRMVFPKINHGFLSAD 178
GPPG G++G RG+ G G PGPQGPPG P G KGE G G P K G +
Sbjct: 491 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSP 550
Query: 179 QQLIKRRLIKGDQGQAGPPGP-----PGPPGPRGPPGDTGKDGPRG---MPGVPGEPGKP 230
+ KG+ G+ G PG PGP GP GPPG G GP+G + G GE G
Sbjct: 551 GE-------KGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGFQ 603
Query: 231 GEQGLMGPLG------------PPGQKGSIGAPGIPGMNGQ---KGEPGLPGAVGQNGIP 275
GE+G GPLG PPG G IG PG G G+ KG+PG+ G G G+P
Sbjct: 604 GEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLP 663
Query: 276 ---GPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPG 317
GP G+ G +GE+G G GPKGD G++G PG A GE G
Sbjct: 664 GLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDG 708
Score = 154 bits (390), Expect = 2e-37
Identities = 109/283 (38%), Positives = 125/283 (44%), Gaps = 41/283 (14%)
Query: 364 RGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQ--GPRGPPGQKG 421
R EA G P GP G+ G G +G G G G GD+G GPRGPPGQ G
Sbjct: 107 RREAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPG 166
Query: 422 DQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLK 481
+G GP G G G GPKG+ G G PG G QG K
Sbjct: 167 TRGFPGF-------------------PGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQK 207
Query: 482 GSKGDMGD----------PGMTGEKGGIGLPGLPGANGMKGE-----KGDSGMPGPQGPS 526
G KG G+ P I L LP N ++ K + S
Sbjct: 208 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 267
Query: 527 IIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYG 586
I GPPGPPGP GP GP+G GLPGP G P G GP GPKG+ G +G G G RG G
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPGPMG---PPGLPGPPGPKGDPGIQGYHGRKGERGMPG 324
Query: 587 LPGKDGEPGLDGFP--GPRGEKGDLGEKGEKVTSPSQHVPCLI 627
+PGK G G G G +GE G G KGEK S +P L+
Sbjct: 325 MPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLL 367
Score = 56.6 bits (135), Expect = 7e-08
Identities = 38/109 (34%), Positives = 44/109 (40%), Gaps = 32/109 (29%)
Query: 112 REAPSECNCPAGPPGKRGKRGRRGESGPPGQPGP---------QGPPGPKGDKGEQGDQG 162
R P P G PG G +G RG G PG GP GPPG KG++GE+G +G
Sbjct: 623 RPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKG 682
Query: 163 PRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPG--PPGPPGPRGPP 209
R KGD+G G PG P P G G P
Sbjct: 683 SRGP---------------------KGDKGDQGAPGLDAPCPLGEDGLP 710
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 409 bits (1052), Expect = e-114
Identities = 254/582 (43%), Positives = 288/582 (49%), Gaps = 100/582 (17%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGP-RMVFPKINHGFLSAD- 178
P GP G RG RG G+ GP G G GPPGP G++G QG QGP PK G D
Sbjct: 896 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDG 955
Query: 179 -QQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGK-------- 229
+R G QG+ GPPGP G GP+GP G+TG G RG PG PG PG+
Sbjct: 956 LPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAG 1015
Query: 230 -------PGEQGLMGPLGP------PGQKGSIGAPGIPGMNGQKGEPGLPGAVGQ----- 271
PG QG+ G GP PG++G GA G PG+ G +G G PG VG
Sbjct: 1016 KEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERG 1075
Query: 272 ----------NGIPGPKGEPGEQGEKGDAGENGPKGDTGE---------------KGDPG 306
G PGP+G PG GEKG GE GP+G G G PG
Sbjct: 1076 SAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPG 1135
Query: 307 SSA-AGIKGEPGESGRPGQKGEPGLPGLPGL------PGIKGEPGFIGPQGEPGLPGLPG 359
G GEPG+ G G KGE G PG PGL PGI G G GP+G+ G+ G G
Sbjct: 1136 EDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKG 1195
Query: 360 TKGERGEAGPPGR-GERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPG 418
+G RG GPPG G +G PG PG KG+ G+ G GP G G RG +G +GA GP+GPPG
Sbjct: 1196 DEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPG 1255
Query: 419 QKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQ 478
G G + G EA G PGPPG G+ GPKGE+G G G G
Sbjct: 1256 SVGSVGG---VGEKGEPGEA----------GNPGPPGEAGVGGPKGERGEKGEAGPPGAA 1302
Query: 479 GLKGSKGDMGDPGMTGEKGGIGLPGLP------------GANGMKGEKGDSGMPGPQGPS 526
G G+KG GD G G G +G PG P G G KGE GD G PGP GPS
Sbjct: 1303 GPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPS 1362
Query: 527 -IIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPY 585
GPPGPPG GPPG G G G KG G G GP G G G +G G+PGP G
Sbjct: 1363 GEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLR 1422
Query: 586 GLPGKDGEPGL------DGFPGPRGE------KGDLGEKGEK 615
G+PG GE GL DG PGP G KGD G KGEK
Sbjct: 1423 GIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEK 1464
Score = 399 bits (1026), Expect = e-111
Identities = 234/540 (43%), Positives = 272/540 (50%), Gaps = 115/540 (21%)
Query: 113 EAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINH 172
E P P G PG+RG G G G PG+PGPQGPPGP G+KG G++GP+
Sbjct: 1059 EGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQ-------- 1110
Query: 173 GFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGE 232
G G+ G GP G PGP GP G G+DG +G G PG+ G G+
Sbjct: 1111 ----------------GPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGD 1154
Query: 233 QGLMGPLGPPGQKGSIGAPGI------------PGMNGQKGE------PGLPGAVGQNGI 274
+G GP GPPG +G +GAPGI GM GQKG+ PG PG +G G+
Sbjct: 1155 KGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGL 1214
Query: 275 PGPKGEPGEQGE---------KGDAGENGPKGDTGEKGDPGS----SAAGIKGEPGESGR 321
PGP GE GE G+ G G GP G G +G PGS G KGEPGE+G
Sbjct: 1215 PGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN 1274
Query: 322 P---------------GQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGE 366
P G+KGE G PG G PG KG PG GP+G PG G PG G GE
Sbjct: 1275 PGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGE 1334
Query: 367 AGPPG-------RGERGEPGAPGPKGKQGESGTRGP------------KGSKGDRGEKGD 407
GP G +GE G+PG PGP G GE+G GP +G +G++G KG+
Sbjct: 1335 PGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGE 1394
Query: 408 SGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQG 467
+GA+GP G G G QG G PGP G +G+ GP GEQG
Sbjct: 1395 AGAEGPPGKTGPVGPQGP----------------------AGKPGPEGLRGIPGPVGEQG 1432
Query: 468 SPGIPGMD---GEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQG 524
PG G D G G G G GDPG GEKG GL GL G G +GEKGD G+PG QG
Sbjct: 1433 LPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQG 1492
Query: 525 -PSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRG 583
P G G PGP GP GP GP GLPGP+G G G GPAG KG+ G G G PGP G
Sbjct: 1493 SPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPG 1552
Score = 398 bits (1022), Expect = e-110
Identities = 243/534 (45%), Positives = 273/534 (51%), Gaps = 56/534 (10%)
Query: 113 EAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINH 172
E P P G PG G+ G +G+ G PG PG G GPKG G G FP N
Sbjct: 825 EGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPG-------FPGAN- 876
Query: 173 GFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGE 232
G A R + G G G GP GP G RG G TGK GP+G G G PG PGE
Sbjct: 877 GEKGA-------RGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGE 929
Query: 233 QGLMGPLGP---PGQKGSIGAP---GIPGMNGQKGEPGLPGAV---GQNGIPGPKGEPGE 283
+G GP GP PG KG G P G+PG GQ+GE G G G G+ GP+G GE
Sbjct: 930 RGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGE 989
Query: 284 QGEKGDAGENGPKGDTGEKGDPGSSA-AGIKGEPGESGRPGQKGEPGLPGLP---GLPGI 339
G G+ G GP G GE+G PG++ G KG+PG G G+ G GL G P GLPG
Sbjct: 990 TGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGA 1049
Query: 340 KGEPGF---IGPQGEPGLPGLPGTKGERGEAGP---PGR-GERGEPGAPGPKGKQGESGT 392
+G PG GPQG PG G PG +G G AGP PGR G +G PG G KG GE G
Sbjct: 1050 QGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGP 1109
Query: 393 RGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPG 452
+GP G G +G G G GP G PG+ GD+G G+ + + GPPG
Sbjct: 1110 QGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGE-------NGPPG 1162
Query: 453 PPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKG 512
PPG QG G G G G PG G+QG+ G KGD G G G G IGL GLPG G KG
Sbjct: 1163 PPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKG 1222
Query: 513 EKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGP------------HGLPGPKGTDGPMGP 560
E GD G GP GP GP GP GP+G GP GP G PG G GP G
Sbjct: 1223 ENGDVGPMGPPGPP--GPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGE 1280
Query: 561 HGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGE 614
G GPKGERGEKG G PG GP G G G+ G G PGP G GD G GE
Sbjct: 1281 AGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGE 1334
Score = 397 bits (1021), Expect = e-110
Identities = 245/615 (39%), Positives = 289/615 (46%), Gaps = 131/615 (21%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 180
P G PG G +G G+ GP G G QGPPGP G G++G G D+
Sbjct: 554 PVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRG 613
Query: 181 LIKRRLIKGDQGQAGPPGPPGPPGP----------------------------------- 205
+ GD+G G GP GPPGP
Sbjct: 614 FDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPG 673
Query: 206 ----------RGPPGDTGKDGPRGMPGVPGEPGKPGEQGL---MGPLGPPGQKGSIGAPG 252
GPPG G GP+G PG PG+ G PG QGL GP+GPPG+KG G PG
Sbjct: 674 APGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPG 733
Query: 253 IPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQ------------------------GEKG 288
+ G+ G G PG PG GQ+G G G PG Q GEKG
Sbjct: 734 LAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKG 793
Query: 289 DAGENGPKGDTGEKGDPG----------------SSAAGIKGEPGESGRPGQKGEPGLPG 332
+ G G KGD G KGD G AG G+PG SG+ G+KG+ G+PG
Sbjct: 794 EDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPG 853
Query: 333 LPGLPGIKGE------PGFIGPQGEPGLPGLPGTKGERGEAGPPG----RGERGEPGAPG 382
LPG PG +G PGF G GE G G+ G G RG+ GP G RG RG G PG
Sbjct: 854 LPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPG 913
Query: 383 PKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRI 442
PKG G G GP G +G +G +G G GP+GPPG G G + + G E
Sbjct: 914 PKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDG---LPGHPGQRGET---- 966
Query: 443 TTLTVTGPP------GPPGPQGLQGPKGEQGSPGIPGMDGEQGL------KGSKGDMGDP 490
TGPP GP GP G GP GE+G PG PG GEQGL +G+KGD G
Sbjct: 967 GFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQ 1026
Query: 491 GMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGP------------PGPHG 538
G++G+ G GL G PG G+ G +G G+ G +GP GPPGP GP G
Sbjct: 1027 GISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQ--GPPGPVGSPGERGSAGTAGPIG 1084
Query: 539 PPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDG 598
PG GP G PGP G G G GP GP G G +G +G PGP GP G PG+DG+ G G
Sbjct: 1085 LPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIG 1144
Query: 599 FPGPRGEKGDLGEKG 613
PG +G KGD GE G
Sbjct: 1145 EPGQKGSKGDKGENG 1159
Score = 393 bits (1009), Expect = e-109
Identities = 240/549 (43%), Positives = 274/549 (49%), Gaps = 59/549 (10%)
Query: 112 REAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKIN 171
R+ P G PG G++G RG +G PG G +GP GP+G +G +G G PK
Sbjct: 860 RQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTG--KPGPKGT 917
Query: 172 HGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGE----- 226
G G++G GP GP G PGP+GPPG GKDG G PG GE
Sbjct: 918 SGGDGPPGP-------PGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQG 970
Query: 227 -PGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQG 285
G PG G++GP GP G+ G IG G PG G GE GLPGA G+ G KG+PG QG
Sbjct: 971 KTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKE---GAKGDPGPQG 1027
Query: 286 EKGDAGENGPKGDTGEKGDPGSSAA-GIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPG 344
G G G +G GE+G PG+ A G+KG G G PG G PG G G G G PG
Sbjct: 1028 ISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPG 1087
Query: 345 FIGPQGEPGLPGLPGTKGERGEAGPPGR----GERGEPGAPGPKGKQGESGTRGPKGSKG 400
GPQG PG G G GE+G GP GR G G PG GP G GE G +G G G
Sbjct: 1088 RPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPG 1147
Query: 401 DRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQR--------ITTLTVTGPPG 452
+G KGD G GP GPPG +G GA I +G Q+ GPPG
Sbjct: 1148 QKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPG 1207
Query: 453 PPGPQGLQGPKGEQGS---------PGIPGMDGEQGLKGSKGDMGDPGMTGEKGGI---- 499
P G QGL GP GE+G PG PG G QG G+ G G PG G GG+
Sbjct: 1208 PIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKG 1267
Query: 500 --------GLPGLPGANGMKGEKGDSGMPGPQG----PSIIGPPGPPGPHGPPGPMGPHG 547
G PG G G KGE+G+ G GP G P GPPG GP G PGP+G G
Sbjct: 1268 EPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPG 1327
Query: 548 LPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGP---RGPYGLPGKDGEPGLDGFPGPRG 604
PGP G GP G G G KGE G+ G G PGP GP G PGK G PG G G +G
Sbjct: 1328 DPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQG 1387
Query: 605 EKGDLGEKG 613
EKG GE G
Sbjct: 1388 EKGAKGEAG 1396
Score = 390 bits (1003), Expect = e-108
Identities = 227/526 (43%), Positives = 276/526 (52%), Gaps = 43/526 (8%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGP--RMVFPKINHGFLSAD 178
PAGP G G G +G +GPPG PG +GPPG G G G GP M+ +G +
Sbjct: 458 PAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSK 517
Query: 179 QQLIKRRLIKGD----QGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQG 234
I + + Q + GPPGP G G PG G G G G G+PG G +G
Sbjct: 518 GPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRG 577
Query: 235 LMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENG 294
+ GP GP G+ G G PG G G GEPG G G +G+PG G+ G +GE+G G G
Sbjct: 578 VQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPG 637
Query: 295 PKGDTGEKGDPGS-SAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEP---GFIGPQG 350
P GD G +G+ G G+ GE G G G +G PG PG PG+ G+ G P G +GPQG
Sbjct: 638 PPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQG 697
Query: 351 EPGLPGLPGTKGERGEAGPPG----RGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKG 406
EPG PG G G +G GP G GE+G G PG G G G G G +G GEKG
Sbjct: 698 EPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKG 757
Query: 407 DSGAQGPRGP---PGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPK 463
G GP+GP PG +G +GA + G+ E + G PG G GL+G +
Sbjct: 758 ALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGE-------DGFPGFKGDMGLKGDR 810
Query: 464 GEQGSPGIPGMDGEQGLKGSKGDMGDP---GMTGEKGGIGLPGLPGANGMKGEKGDSGMP 520
GE G G G DG +G KG G GDP G GEKG +G+PGLPG G +G KG +G P
Sbjct: 811 GEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFP 870
Query: 521 GPQGPS-------IIGPPGPPGPHGPPGP------MGPHGLPGPKGTDGPMGPHGPAGPK 567
G G + + G PGP G GP GP GP G PGPKGT G GP GP G +
Sbjct: 871 GFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGER 930
Query: 568 GERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKG 613
G +G +G +G PGP+GP G PGKDG P G PG RGE G G+ G
Sbjct: 931 GPQGPQGPVGFPGPKGPPGPPGKDGLP---GHPGQRGETGFQGKTG 973
Score = 341 bits (875), Expect = 1e-93
Identities = 210/530 (39%), Positives = 255/530 (48%), Gaps = 92/530 (17%)
Query: 150 GPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPG---PPGPPGPR 206
G G+KG++G+ P +V P + L++G G AGP G PPG GP
Sbjct: 432 GAYGEKGQKGE--PAVVEPGM---------------LVEGPPGPAGPAGIMGPPGLQGPT 474
Query: 207 GPPGDTGKDGPRGMPGVPGEPGKPGEQGLM------------------------------ 236
GPPGD G GP G PG+PG G PG G M
Sbjct: 475 GPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQ 534
Query: 237 ---------GPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEK 287
GP+G G+ G +G PG G G+ G+PG G G G PGP G+PG++G
Sbjct: 535 ARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRP 594
Query: 288 GDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIG 347
G G G G+ G KGD G G+ G PG+ G G++G G PG PG G++GE G IG
Sbjct: 595 GADGGRGMPGEPGAKGDRGFD--GLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIG 652
Query: 348 PQGEPGLPGLPGTKGERGEAGPPGR-GERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKG 406
P+G PG G G G RG G PG+ G G G PGPKG G G GP G +G+ G +G
Sbjct: 653 PRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQG 712
Query: 407 DSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQ 466
G QGP GPPG+KG QG + G GPPG PG +G G KG
Sbjct: 713 LPGPQGPIGPPGEKGPQGKPGLAGLPG-------------ADGPPGHPGKEGQSGEKGAL 759
Query: 467 GSPG------------IPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEK 514
G PG + G DG +GLKGSKG+ G+ G G KG +GL G G G G +
Sbjct: 760 GPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPR 819
Query: 515 GDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKG 574
G+ G GP+G + GP G PGP G G G G+PG G G GP G G G G
Sbjct: 820 GEDGPEGPKGRA--GPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGF---PG 874
Query: 575 AMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKVTSPSQHVP 624
A GE G RG G PG G+ G G G RG +G G+ G K TS P
Sbjct: 875 ANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPP 924
Score = 156 bits (394), Expect = 6e-38
Identities = 91/220 (41%), Positives = 112/220 (50%), Gaps = 41/220 (18%)
Query: 121 PAGPPGKRG------------KRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFP 168
P GPPGKRG ++G +GE+G G PG GP GP+G G+ G +G R +
Sbjct: 1367 PPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPG 1426
Query: 169 KINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPG 228
+ +G G AG GPPGP GP G P G +G PG GE G
Sbjct: 1427 PVGE---------------QGLPGAAGQDGPPGPMGPPGLP------GLKGDPGSKGEKG 1465
Query: 229 KPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKG 288
PG GL+GP G G+KG G PG G G KG+ G+PG G G PGP G PG QG KG
Sbjct: 1466 HPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKG 1525
Query: 289 DAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEP 328
+ G GP G+KGD +G+ G PG G PG+ +P
Sbjct: 1526 NKGSTGP---AGQKGD-----SGLPGPPGSPGPPGEVIQP 1557
Score = 132 bits (331), Expect = 1e-30
Identities = 76/184 (41%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 103 EHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQG 162
E AK E P P GP G GK G G G PG G QG PG G G G G
Sbjct: 1388 EKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMG 1447
Query: 163 PRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPG 222
P P + +KGD G G G PG G GPPG+ G+ G RG+PG
Sbjct: 1448 P----PGLPG--------------LKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPG 1489
Query: 223 VPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPG 282
G PG G+ G+ GP GP G G G PG G G KG G G G +G+PGP G PG
Sbjct: 1490 TQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPG 1549
Query: 283 EQGE 286
GE
Sbjct: 1550 PPGE 1553
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 409 bits (1052), Expect = e-114
Identities = 254/582 (43%), Positives = 288/582 (49%), Gaps = 100/582 (17%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGP-RMVFPKINHGFLSAD- 178
P GP G RG RG G+ GP G G GPPGP G++G QG QGP PK G D
Sbjct: 845 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDG 904
Query: 179 -QQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGK-------- 229
+R G QG+ GPPGP G GP+GP G+TG G RG PG PG PG+
Sbjct: 905 LPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAG 964
Query: 230 -------PGEQGLMGPLGP------PGQKGSIGAPGIPGMNGQKGEPGLPGAVGQ----- 271
PG QG+ G GP PG++G GA G PG+ G +G G PG VG
Sbjct: 965 KEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERG 1024
Query: 272 ----------NGIPGPKGEPGEQGEKGDAGENGPKGDTGE---------------KGDPG 306
G PGP+G PG GEKG GE GP+G G G PG
Sbjct: 1025 SAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPG 1084
Query: 307 SSA-AGIKGEPGESGRPGQKGEPGLPGLPGL------PGIKGEPGFIGPQGEPGLPGLPG 359
G GEPG+ G G KGE G PG PGL PGI G G GP+G+ G+ G G
Sbjct: 1085 EDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKG 1144
Query: 360 TKGERGEAGPPGR-GERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPG 418
+G RG GPPG G +G PG PG KG+ G+ G GP G G RG +G +GA GP+GPPG
Sbjct: 1145 DEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPG 1204
Query: 419 QKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQ 478
G G + G EA G PGPPG G+ GPKGE+G G G G
Sbjct: 1205 SVGSVGG---VGEKGEPGEA----------GNPGPPGEAGVGGPKGERGEKGEAGPPGAA 1251
Query: 479 GLKGSKGDMGDPGMTGEKGGIGLPGLP------------GANGMKGEKGDSGMPGPQGPS 526
G G+KG GD G G G +G PG P G G KGE GD G PGP GPS
Sbjct: 1252 GPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPS 1311
Query: 527 -IIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPY 585
GPPGPPG GPPG G G G KG G G GP G G G +G G+PGP G
Sbjct: 1312 GEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLR 1371
Query: 586 GLPGKDGEPGL------DGFPGPRGE------KGDLGEKGEK 615
G+PG GE GL DG PGP G KGD G KGEK
Sbjct: 1372 GIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEK 1413
Score = 399 bits (1026), Expect = e-111
Identities = 234/540 (43%), Positives = 272/540 (50%), Gaps = 115/540 (21%)
Query: 113 EAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINH 172
E P P G PG+RG G G G PG+PGPQGPPGP G+KG G++GP+
Sbjct: 1008 EGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQ-------- 1059
Query: 173 GFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGE 232
G G+ G GP G PGP GP G G+DG +G G PG+ G G+
Sbjct: 1060 ----------------GPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGD 1103
Query: 233 QGLMGPLGPPGQKGSIGAPGI------------PGMNGQKGE------PGLPGAVGQNGI 274
+G GP GPPG +G +GAPGI GM GQKG+ PG PG +G G+
Sbjct: 1104 KGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGL 1163
Query: 275 PGPKGEPGEQGE---------KGDAGENGPKGDTGEKGDPGS----SAAGIKGEPGESGR 321
PGP GE GE G+ G G GP G G +G PGS G KGEPGE+G
Sbjct: 1164 PGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN 1223
Query: 322 P---------------GQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGE 366
P G+KGE G PG G PG KG PG GP+G PG G PG G GE
Sbjct: 1224 PGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGE 1283
Query: 367 AGPPG-------RGERGEPGAPGPKGKQGESGTRGP------------KGSKGDRGEKGD 407
GP G +GE G+PG PGP G GE+G GP +G +G++G KG+
Sbjct: 1284 PGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGE 1343
Query: 408 SGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQG 467
+GA+GP G G G QG G PGP G +G+ GP GEQG
Sbjct: 1344 AGAEGPPGKTGPVGPQGP----------------------AGKPGPEGLRGIPGPVGEQG 1381
Query: 468 SPGIPGMD---GEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQG 524
PG G D G G G G GDPG GEKG GL GL G G +GEKGD G+PG QG
Sbjct: 1382 LPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQG 1441
Query: 525 -PSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRG 583
P G G PGP GP GP GP GLPGP+G G G GPAG KG+ G G G PGP G
Sbjct: 1442 SPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPG 1501
Score = 398 bits (1022), Expect = e-110
Identities = 243/534 (45%), Positives = 273/534 (51%), Gaps = 56/534 (10%)
Query: 113 EAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINH 172
E P P G PG G+ G +G+ G PG PG G GPKG G G FP N
Sbjct: 774 EGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPG-------FPGAN- 825
Query: 173 GFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGE 232
G A R + G G G GP GP G RG G TGK GP+G G G PG PGE
Sbjct: 826 GEKGA-------RGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGE 878
Query: 233 QGLMGPLGP---PGQKGSIGAP---GIPGMNGQKGEPGLPGAV---GQNGIPGPKGEPGE 283
+G GP GP PG KG G P G+PG GQ+GE G G G G+ GP+G GE
Sbjct: 879 RGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGE 938
Query: 284 QGEKGDAGENGPKGDTGEKGDPGSSA-AGIKGEPGESGRPGQKGEPGLPGLP---GLPGI 339
G G+ G GP G GE+G PG++ G KG+PG G G+ G GL G P GLPG
Sbjct: 939 TGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGA 998
Query: 340 KGEPGF---IGPQGEPGLPGLPGTKGERGEAGP---PGR-GERGEPGAPGPKGKQGESGT 392
+G PG GPQG PG G PG +G G AGP PGR G +G PG G KG GE G
Sbjct: 999 QGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGP 1058
Query: 393 RGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPG 452
+GP G G +G G G GP G PG+ GD+G G+ + + GPPG
Sbjct: 1059 QGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGE-------NGPPG 1111
Query: 453 PPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKG 512
PPG QG G G G G PG G+QG+ G KGD G G G G IGL GLPG G KG
Sbjct: 1112 PPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKG 1171
Query: 513 EKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGP------------HGLPGPKGTDGPMGP 560
E GD G GP GP GP GP GP+G GP GP G PG G GP G
Sbjct: 1172 ENGDVGPMGPPGPP--GPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGE 1229
Query: 561 HGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGE 614
G GPKGERGEKG G PG GP G G G+ G G PGP G GD G GE
Sbjct: 1230 AGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGE 1283
Score = 397 bits (1021), Expect = e-110
Identities = 245/615 (39%), Positives = 289/615 (46%), Gaps = 131/615 (21%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 180
P G PG G +G G+ GP G G QGPPGP G G++G G D+
Sbjct: 503 PVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRG 562
Query: 181 LIKRRLIKGDQGQAGPPGPPGPPGP----------------------------------- 205
+ GD+G G GP GPPGP
Sbjct: 563 FDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPG 622
Query: 206 ----------RGPPGDTGKDGPRGMPGVPGEPGKPGEQGL---MGPLGPPGQKGSIGAPG 252
GPPG G GP+G PG PG+ G PG QGL GP+GPPG+KG G PG
Sbjct: 623 APGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPG 682
Query: 253 IPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQ------------------------GEKG 288
+ G+ G G PG PG GQ+G G G PG Q GEKG
Sbjct: 683 LAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKG 742
Query: 289 DAGENGPKGDTGEKGDPG----------------SSAAGIKGEPGESGRPGQKGEPGLPG 332
+ G G KGD G KGD G AG G+PG SG+ G+KG+ G+PG
Sbjct: 743 EDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPG 802
Query: 333 LPGLPGIKGE------PGFIGPQGEPGLPGLPGTKGERGEAGPPG----RGERGEPGAPG 382
LPG PG +G PGF G GE G G+ G G RG+ GP G RG RG G PG
Sbjct: 803 LPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPG 862
Query: 383 PKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRI 442
PKG G G GP G +G +G +G G GP+GPPG G G + + G E
Sbjct: 863 PKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDG---LPGHPGQRGET---- 915
Query: 443 TTLTVTGPP------GPPGPQGLQGPKGEQGSPGIPGMDGEQGL------KGSKGDMGDP 490
TGPP GP GP G GP GE+G PG PG GEQGL +G+KGD G
Sbjct: 916 GFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQ 975
Query: 491 GMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGP------------PGPHG 538
G++G+ G GL G PG G+ G +G G+ G +GP GPPGP GP G
Sbjct: 976 GISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQ--GPPGPVGSPGERGSAGTAGPIG 1033
Query: 539 PPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDG 598
PG GP G PGP G G G GP GP G G +G +G PGP GP G PG+DG+ G G
Sbjct: 1034 LPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIG 1093
Query: 599 FPGPRGEKGDLGEKG 613
PG +G KGD GE G
Sbjct: 1094 EPGQKGSKGDKGENG 1108
Score = 393 bits (1009), Expect = e-109
Identities = 240/549 (43%), Positives = 274/549 (49%), Gaps = 59/549 (10%)
Query: 112 REAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKIN 171
R+ P G PG G++G RG +G PG G +GP GP+G +G +G G PK
Sbjct: 809 RQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTG--KPGPKGT 866
Query: 172 HGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGE----- 226
G G++G GP GP G PGP+GPPG GKDG G PG GE
Sbjct: 867 SGGDGPPGP-------PGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQG 919
Query: 227 -PGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQG 285
G PG G++GP GP G+ G IG G PG G GE GLPGA G+ G KG+PG QG
Sbjct: 920 KTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKE---GAKGDPGPQG 976
Query: 286 EKGDAGENGPKGDTGEKGDPGSSAA-GIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPG 344
G G G +G GE+G PG+ A G+KG G G PG G PG G G G G PG
Sbjct: 977 ISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPG 1036
Query: 345 FIGPQGEPGLPGLPGTKGERGEAGPPGR----GERGEPGAPGPKGKQGESGTRGPKGSKG 400
GPQG PG G G GE+G GP GR G G PG GP G GE G +G G G
Sbjct: 1037 RPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPG 1096
Query: 401 DRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQR--------ITTLTVTGPPG 452
+G KGD G GP GPPG +G GA I +G Q+ GPPG
Sbjct: 1097 QKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPG 1156
Query: 453 PPGPQGLQGPKGEQGS---------PGIPGMDGEQGLKGSKGDMGDPGMTGEKGGI---- 499
P G QGL GP GE+G PG PG G QG G+ G G PG G GG+
Sbjct: 1157 PIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKG 1216
Query: 500 --------GLPGLPGANGMKGEKGDSGMPGPQG----PSIIGPPGPPGPHGPPGPMGPHG 547
G PG G G KGE+G+ G GP G P GPPG GP G PGP+G G
Sbjct: 1217 EPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPG 1276
Query: 548 LPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGP---RGPYGLPGKDGEPGLDGFPGPRG 604
PGP G GP G G G KGE G+ G G PGP GP G PGK G PG G G +G
Sbjct: 1277 DPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQG 1336
Query: 605 EKGDLGEKG 613
EKG GE G
Sbjct: 1337 EKGAKGEAG 1345
Score = 390 bits (1003), Expect = e-108
Identities = 227/526 (43%), Positives = 276/526 (52%), Gaps = 43/526 (8%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGP--RMVFPKINHGFLSAD 178
PAGP G G G +G +GPPG PG +GPPG G G G GP M+ +G +
Sbjct: 407 PAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSK 466
Query: 179 QQLIKRRLIKGD----QGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQG 234
I + + Q + GPPGP G G PG G G G G G+PG G +G
Sbjct: 467 GPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRG 526
Query: 235 LMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENG 294
+ GP GP G+ G G PG G G GEPG G G +G+PG G+ G +GE+G G G
Sbjct: 527 VQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPG 586
Query: 295 PKGDTGEKGDPGS-SAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEP---GFIGPQG 350
P GD G +G+ G G+ GE G G G +G PG PG PG+ G+ G P G +GPQG
Sbjct: 587 PPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQG 646
Query: 351 EPGLPGLPGTKGERGEAGPPG----RGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKG 406
EPG PG G G +G GP G GE+G G PG G G G G G +G GEKG
Sbjct: 647 EPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKG 706
Query: 407 DSGAQGPRGP---PGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPK 463
G GP+GP PG +G +GA + G+ E + G PG G GL+G +
Sbjct: 707 ALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGE-------DGFPGFKGDMGLKGDR 759
Query: 464 GEQGSPGIPGMDGEQGLKGSKGDMGDP---GMTGEKGGIGLPGLPGANGMKGEKGDSGMP 520
GE G G G DG +G KG G GDP G GEKG +G+PGLPG G +G KG +G P
Sbjct: 760 GEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFP 819
Query: 521 GPQGPS-------IIGPPGPPGPHGPPGP------MGPHGLPGPKGTDGPMGPHGPAGPK 567
G G + + G PGP G GP GP GP G PGPKGT G GP GP G +
Sbjct: 820 GFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGER 879
Query: 568 GERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKG 613
G +G +G +G PGP+GP G PGKDG P G PG RGE G G+ G
Sbjct: 880 GPQGPQGPVGFPGPKGPPGPPGKDGLP---GHPGQRGETGFQGKTG 922
Score = 341 bits (875), Expect = 1e-93
Identities = 210/530 (39%), Positives = 255/530 (48%), Gaps = 92/530 (17%)
Query: 150 GPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPG---PPGPPGPR 206
G G+KG++G+ P +V P + L++G G AGP G PPG GP
Sbjct: 381 GAYGEKGQKGE--PAVVEPGM---------------LVEGPPGPAGPAGIMGPPGLQGPT 423
Query: 207 GPPGDTGKDGPRGMPGVPGEPGKPGEQGLM------------------------------ 236
GPPGD G GP G PG+PG G PG G M
Sbjct: 424 GPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQ 483
Query: 237 ---------GPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEK 287
GP+G G+ G +G PG G G+ G+PG G G G PGP G+PG++G
Sbjct: 484 ARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRP 543
Query: 288 GDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIG 347
G G G G+ G KGD G G+ G PG+ G G++G G PG PG G++GE G IG
Sbjct: 544 GADGGRGMPGEPGAKGDRGFD--GLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIG 601
Query: 348 PQGEPGLPGLPGTKGERGEAGPPGR-GERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKG 406
P+G PG G G G RG G PG+ G G G PGPKG G G GP G +G+ G +G
Sbjct: 602 PRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQG 661
Query: 407 DSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQ 466
G QGP GPPG+KG QG + G GPPG PG +G G KG
Sbjct: 662 LPGPQGPIGPPGEKGPQGKPGLAGLPG-------------ADGPPGHPGKEGQSGEKGAL 708
Query: 467 GSPG------------IPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEK 514
G PG + G DG +GLKGSKG+ G+ G G KG +GL G G G G +
Sbjct: 709 GPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPR 768
Query: 515 GDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKG 574
G+ G GP+G + GP G PGP G G G G+PG G G GP G G G G
Sbjct: 769 GEDGPEGPKGRA--GPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGF---PG 823
Query: 575 AMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKVTSPSQHVP 624
A GE G RG G PG G+ G G G RG +G G+ G K TS P
Sbjct: 824 ANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPP 873
Score = 156 bits (394), Expect = 6e-38
Identities = 91/220 (41%), Positives = 112/220 (50%), Gaps = 41/220 (18%)
Query: 121 PAGPPGKRG------------KRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFP 168
P GPPGKRG ++G +GE+G G PG GP GP+G G+ G +G R +
Sbjct: 1316 PPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPG 1375
Query: 169 KINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPG 228
+ +G G AG GPPGP GP G P G +G PG GE G
Sbjct: 1376 PVGE---------------QGLPGAAGQDGPPGPMGPPGLP------GLKGDPGSKGEKG 1414
Query: 229 KPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKG 288
PG GL+GP G G+KG G PG G G KG+ G+PG G G PGP G PG QG KG
Sbjct: 1415 HPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKG 1474
Query: 289 DAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEP 328
+ G GP G+KGD +G+ G PG G PG+ +P
Sbjct: 1475 NKGSTGP---AGQKGD-----SGLPGPPGSPGPPGEVIQP 1506
Score = 132 bits (331), Expect = 1e-30
Identities = 76/184 (41%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 103 EHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQG 162
E AK E P P GP G GK G G G PG G QG PG G G G G
Sbjct: 1337 EKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMG 1396
Query: 163 PRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPG 222
P P + +KGD G G G PG G GPPG+ G+ G RG+PG
Sbjct: 1397 P----PGLPG--------------LKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPG 1438
Query: 223 VPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPG 282
G PG G+ G+ GP GP G G G PG G G KG G G G +G+PGP G PG
Sbjct: 1439 TQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPG 1498
Query: 283 EQGE 286
GE
Sbjct: 1499 PPGE 1502
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 409 bits (1052), Expect = e-114
Identities = 254/582 (43%), Positives = 288/582 (49%), Gaps = 100/582 (17%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGP-RMVFPKINHGFLSAD- 178
P GP G RG RG G+ GP G G GPPGP G++G QG QGP PK G D
Sbjct: 884 PTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDG 943
Query: 179 -QQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGK-------- 229
+R G QG+ GPPGP G GP+GP G+TG G RG PG PG PG+
Sbjct: 944 LPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAG 1003
Query: 230 -------PGEQGLMGPLGP------PGQKGSIGAPGIPGMNGQKGEPGLPGAVGQ----- 271
PG QG+ G GP PG++G GA G PG+ G +G G PG VG
Sbjct: 1004 KEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERG 1063
Query: 272 ----------NGIPGPKGEPGEQGEKGDAGENGPKGDTGE---------------KGDPG 306
G PGP+G PG GEKG GE GP+G G G PG
Sbjct: 1064 SAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPG 1123
Query: 307 SSA-AGIKGEPGESGRPGQKGEPGLPGLPGL------PGIKGEPGFIGPQGEPGLPGLPG 359
G GEPG+ G G KGE G PG PGL PGI G G GP+G+ G+ G G
Sbjct: 1124 EDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKG 1183
Query: 360 TKGERGEAGPPGR-GERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPG 418
+G RG GPPG G +G PG PG KG+ G+ G GP G G RG +G +GA GP+GPPG
Sbjct: 1184 DEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPG 1243
Query: 419 QKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQ 478
G G + G EA G PGPPG G+ GPKGE+G G G G
Sbjct: 1244 SVGSVGG---VGEKGEPGEA----------GNPGPPGEAGVGGPKGERGEKGEAGPPGAA 1290
Query: 479 GLKGSKGDMGDPGMTGEKGGIGLPGLP------------GANGMKGEKGDSGMPGPQGPS 526
G G+KG GD G G G +G PG P G G KGE GD G PGP GPS
Sbjct: 1291 GPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPS 1350
Query: 527 -IIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPY 585
GPPGPPG GPPG G G G KG G G GP G G G +G G+PGP G
Sbjct: 1351 GEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLR 1410
Query: 586 GLPGKDGEPGL------DGFPGPRGE------KGDLGEKGEK 615
G+PG GE GL DG PGP G KGD G KGEK
Sbjct: 1411 GIPGPVGEQGLPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEK 1452
Score = 399 bits (1026), Expect = e-111
Identities = 234/540 (43%), Positives = 272/540 (50%), Gaps = 115/540 (21%)
Query: 113 EAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINH 172
E P P G PG+RG G G G PG+PGPQGPPGP G+KG G++GP+
Sbjct: 1047 EGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQ-------- 1098
Query: 173 GFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGE 232
G G+ G GP G PGP GP G G+DG +G G PG+ G G+
Sbjct: 1099 ----------------GPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGD 1142
Query: 233 QGLMGPLGPPGQKGSIGAPGI------------PGMNGQKGE------PGLPGAVGQNGI 274
+G GP GPPG +G +GAPGI GM GQKG+ PG PG +G G+
Sbjct: 1143 KGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGL 1202
Query: 275 PGPKGEPGEQGE---------KGDAGENGPKGDTGEKGDPGS----SAAGIKGEPGESGR 321
PGP GE GE G+ G G GP G G +G PGS G KGEPGE+G
Sbjct: 1203 PGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN 1262
Query: 322 P---------------GQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGE 366
P G+KGE G PG G PG KG PG GP+G PG G PG G GE
Sbjct: 1263 PGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGE 1322
Query: 367 AGPPG-------RGERGEPGAPGPKGKQGESGTRGP------------KGSKGDRGEKGD 407
GP G +GE G+PG PGP G GE+G GP +G +G++G KG+
Sbjct: 1323 PGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGE 1382
Query: 408 SGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQG 467
+GA+GP G G G QG G PGP G +G+ GP GEQG
Sbjct: 1383 AGAEGPPGKTGPVGPQGP----------------------AGKPGPEGLRGIPGPVGEQG 1420
Query: 468 SPGIPGMD---GEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQG 524
PG G D G G G G GDPG GEKG GL GL G G +GEKGD G+PG QG
Sbjct: 1421 LPGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQG 1480
Query: 525 -PSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRG 583
P G G PGP GP GP GP GLPGP+G G G GPAG KG+ G G G PGP G
Sbjct: 1481 SPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGPPG 1540
Score = 398 bits (1022), Expect = e-110
Identities = 243/534 (45%), Positives = 273/534 (51%), Gaps = 56/534 (10%)
Query: 113 EAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINH 172
E P P G PG G+ G +G+ G PG PG G GPKG G G FP N
Sbjct: 813 EGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPG-------FPGAN- 864
Query: 173 GFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGE 232
G A R + G G G GP GP G RG G TGK GP+G G G PG PGE
Sbjct: 865 GEKGA-------RGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGE 917
Query: 233 QGLMGPLGP---PGQKGSIGAP---GIPGMNGQKGEPGLPGAV---GQNGIPGPKGEPGE 283
+G GP GP PG KG G P G+PG GQ+GE G G G G+ GP+G GE
Sbjct: 918 RGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGE 977
Query: 284 QGEKGDAGENGPKGDTGEKGDPGSSA-AGIKGEPGESGRPGQKGEPGLPGLP---GLPGI 339
G G+ G GP G GE+G PG++ G KG+PG G G+ G GL G P GLPG
Sbjct: 978 TGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGA 1037
Query: 340 KGEPGF---IGPQGEPGLPGLPGTKGERGEAGP---PGR-GERGEPGAPGPKGKQGESGT 392
+G PG GPQG PG G PG +G G AGP PGR G +G PG G KG GE G
Sbjct: 1038 QGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGP 1097
Query: 393 RGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPG 452
+GP G G +G G G GP G PG+ GD+G G+ + + GPPG
Sbjct: 1098 QGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGE-------NGPPG 1150
Query: 453 PPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKG 512
PPG QG G G G G PG G+QG+ G KGD G G G G IGL GLPG G KG
Sbjct: 1151 PPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKG 1210
Query: 513 EKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGP------------HGLPGPKGTDGPMGP 560
E GD G GP GP GP GP GP+G GP GP G PG G GP G
Sbjct: 1211 ENGDVGPMGPPGPP--GPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGE 1268
Query: 561 HGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGE 614
G GPKGERGEKG G PG GP G G G+ G G PGP G GD G GE
Sbjct: 1269 AGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGE 1322
Score = 397 bits (1021), Expect = e-110
Identities = 245/615 (39%), Positives = 289/615 (46%), Gaps = 131/615 (21%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 180
P G PG G +G G+ GP G G QGPPGP G G++G G D+
Sbjct: 542 PVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRG 601
Query: 181 LIKRRLIKGDQGQAGPPGPPGPPGP----------------------------------- 205
+ GD+G G GP GPPGP
Sbjct: 602 FDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPG 661
Query: 206 ----------RGPPGDTGKDGPRGMPGVPGEPGKPGEQGL---MGPLGPPGQKGSIGAPG 252
GPPG G GP+G PG PG+ G PG QGL GP+GPPG+KG G PG
Sbjct: 662 APGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPG 721
Query: 253 IPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQ------------------------GEKG 288
+ G+ G G PG PG GQ+G G G PG Q GEKG
Sbjct: 722 LAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKG 781
Query: 289 DAGENGPKGDTGEKGDPG----------------SSAAGIKGEPGESGRPGQKGEPGLPG 332
+ G G KGD G KGD G AG G+PG SG+ G+KG+ G+PG
Sbjct: 782 EDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPG 841
Query: 333 LPGLPGIKGE------PGFIGPQGEPGLPGLPGTKGERGEAGPPG----RGERGEPGAPG 382
LPG PG +G PGF G GE G G+ G G RG+ GP G RG RG G PG
Sbjct: 842 LPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPG 901
Query: 383 PKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRI 442
PKG G G GP G +G +G +G G GP+GPPG G G + + G E
Sbjct: 902 PKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDG---LPGHPGQRGET---- 954
Query: 443 TTLTVTGPP------GPPGPQGLQGPKGEQGSPGIPGMDGEQGL------KGSKGDMGDP 490
TGPP GP GP G GP GE+G PG PG GEQGL +G+KGD G
Sbjct: 955 GFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQ 1014
Query: 491 GMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGP------------PGPHG 538
G++G+ G GL G PG G+ G +G G+ G +GP GPPGP GP G
Sbjct: 1015 GISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQ--GPPGPVGSPGERGSAGTAGPIG 1072
Query: 539 PPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDG 598
PG GP G PGP G G G GP GP G G +G +G PGP GP G PG+DG+ G G
Sbjct: 1073 LPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIG 1132
Query: 599 FPGPRGEKGDLGEKG 613
PG +G KGD GE G
Sbjct: 1133 EPGQKGSKGDKGENG 1147
Score = 393 bits (1009), Expect = e-109
Identities = 240/549 (43%), Positives = 274/549 (49%), Gaps = 59/549 (10%)
Query: 112 REAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKIN 171
R+ P G PG G++G RG +G PG G +GP GP+G +G +G G PK
Sbjct: 848 RQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTG--KPGPKGT 905
Query: 172 HGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGE----- 226
G G++G GP GP G PGP+GPPG GKDG G PG GE
Sbjct: 906 SGGDGPPGP-------PGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQG 958
Query: 227 -PGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQG 285
G PG G++GP GP G+ G IG G PG G GE GLPGA G+ G KG+PG QG
Sbjct: 959 KTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKE---GAKGDPGPQG 1015
Query: 286 EKGDAGENGPKGDTGEKGDPGSSAA-GIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPG 344
G G G +G GE+G PG+ A G+KG G G PG G PG G G G G PG
Sbjct: 1016 ISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPG 1075
Query: 345 FIGPQGEPGLPGLPGTKGERGEAGPPGR----GERGEPGAPGPKGKQGESGTRGPKGSKG 400
GPQG PG G G GE+G GP GR G G PG GP G GE G +G G G
Sbjct: 1076 RPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPG 1135
Query: 401 DRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQR--------ITTLTVTGPPG 452
+G KGD G GP GPPG +G GA I +G Q+ GPPG
Sbjct: 1136 QKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPG 1195
Query: 453 PPGPQGLQGPKGEQGS---------PGIPGMDGEQGLKGSKGDMGDPGMTGEKGGI---- 499
P G QGL GP GE+G PG PG G QG G+ G G PG G GG+
Sbjct: 1196 PIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKG 1255
Query: 500 --------GLPGLPGANGMKGEKGDSGMPGPQG----PSIIGPPGPPGPHGPPGPMGPHG 547
G PG G G KGE+G+ G GP G P GPPG GP G PGP+G G
Sbjct: 1256 EPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPG 1315
Query: 548 LPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGP---RGPYGLPGKDGEPGLDGFPGPRG 604
PGP G GP G G G KGE G+ G G PGP GP G PGK G PG G G +G
Sbjct: 1316 DPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQG 1375
Query: 605 EKGDLGEKG 613
EKG GE G
Sbjct: 1376 EKGAKGEAG 1384
Score = 390 bits (1003), Expect = e-108
Identities = 227/526 (43%), Positives = 276/526 (52%), Gaps = 43/526 (8%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGP--RMVFPKINHGFLSAD 178
PAGP G G G +G +GPPG PG +GPPG G G G GP M+ +G +
Sbjct: 446 PAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSK 505
Query: 179 QQLIKRRLIKGD----QGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQG 234
I + + Q + GPPGP G G PG G G G G G+PG G +G
Sbjct: 506 GPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRG 565
Query: 235 LMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENG 294
+ GP GP G+ G G PG G G GEPG G G +G+PG G+ G +GE+G G G
Sbjct: 566 VQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPG 625
Query: 295 PKGDTGEKGDPGS-SAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEP---GFIGPQG 350
P GD G +G+ G G+ GE G G G +G PG PG PG+ G+ G P G +GPQG
Sbjct: 626 PPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQG 685
Query: 351 EPGLPGLPGTKGERGEAGPPG----RGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKG 406
EPG PG G G +G GP G GE+G G PG G G G G G +G GEKG
Sbjct: 686 EPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKG 745
Query: 407 DSGAQGPRGP---PGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPK 463
G GP+GP PG +G +GA + G+ E + G PG G GL+G +
Sbjct: 746 ALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGE-------DGFPGFKGDMGLKGDR 798
Query: 464 GEQGSPGIPGMDGEQGLKGSKGDMGDP---GMTGEKGGIGLPGLPGANGMKGEKGDSGMP 520
GE G G G DG +G KG G GDP G GEKG +G+PGLPG G +G KG +G P
Sbjct: 799 GEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFP 858
Query: 521 GPQGPS-------IIGPPGPPGPHGPPGP------MGPHGLPGPKGTDGPMGPHGPAGPK 567
G G + + G PGP G GP GP GP G PGPKGT G GP GP G +
Sbjct: 859 GFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGER 918
Query: 568 GERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKG 613
G +G +G +G PGP+GP G PGKDG P G PG RGE G G+ G
Sbjct: 919 GPQGPQGPVGFPGPKGPPGPPGKDGLP---GHPGQRGETGFQGKTG 961
Score = 341 bits (875), Expect = 1e-93
Identities = 210/530 (39%), Positives = 255/530 (48%), Gaps = 92/530 (17%)
Query: 150 GPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPG---PPGPPGPR 206
G G+KG++G+ P +V P + L++G G AGP G PPG GP
Sbjct: 420 GAYGEKGQKGE--PAVVEPGM---------------LVEGPPGPAGPAGIMGPPGLQGPT 462
Query: 207 GPPGDTGKDGPRGMPGVPGEPGKPGEQGLM------------------------------ 236
GPPGD G GP G PG+PG G PG G M
Sbjct: 463 GPPGDPGDRGPPGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQ 522
Query: 237 ---------GPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEK 287
GP+G G+ G +G PG G G+ G+PG G G G PGP G+PG++G
Sbjct: 523 ARIALRGPPGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRP 582
Query: 288 GDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIG 347
G G G G+ G KGD G G+ G PG+ G G++G G PG PG G++GE G IG
Sbjct: 583 GADGGRGMPGEPGAKGDRGFD--GLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIG 640
Query: 348 PQGEPGLPGLPGTKGERGEAGPPGR-GERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKG 406
P+G PG G G G RG G PG+ G G G PGPKG G G GP G +G+ G +G
Sbjct: 641 PRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQG 700
Query: 407 DSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQ 466
G QGP GPPG+KG QG + G GPPG PG +G G KG
Sbjct: 701 LPGPQGPIGPPGEKGPQGKPGLAGLPG-------------ADGPPGHPGKEGQSGEKGAL 747
Query: 467 GSPG------------IPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEK 514
G PG + G DG +GLKGSKG+ G+ G G KG +GL G G G G +
Sbjct: 748 GPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPR 807
Query: 515 GDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKG 574
G+ G GP+G + GP G PGP G G G G+PG G G GP G G G G
Sbjct: 808 GEDGPEGPKGRA--GPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGF---PG 862
Query: 575 AMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKVTSPSQHVP 624
A GE G RG G PG G+ G G G RG +G G+ G K TS P
Sbjct: 863 ANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPP 912
Score = 156 bits (394), Expect = 6e-38
Identities = 91/220 (41%), Positives = 112/220 (50%), Gaps = 41/220 (18%)
Query: 121 PAGPPGKRG------------KRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFP 168
P GPPGKRG ++G +GE+G G PG GP GP+G G+ G +G R +
Sbjct: 1355 PPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPG 1414
Query: 169 KINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPG 228
+ +G G AG GPPGP GP G P G +G PG GE G
Sbjct: 1415 PVGE---------------QGLPGAAGQDGPPGPMGPPGLP------GLKGDPGSKGEKG 1453
Query: 229 KPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKG 288
PG GL+GP G G+KG G PG G G KG+ G+PG G G PGP G PG QG KG
Sbjct: 1454 HPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKG 1513
Query: 289 DAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEP 328
+ G GP G+KGD +G+ G PG G PG+ +P
Sbjct: 1514 NKGSTGP---AGQKGD-----SGLPGPPGSPGPPGEVIQP 1545
Score = 132 bits (331), Expect = 1e-30
Identities = 76/184 (41%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 103 EHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQG 162
E AK E P P GP G GK G G G PG G QG PG G G G G
Sbjct: 1376 EKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMG 1435
Query: 163 PRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPG 222
P P + +KGD G G G PG G GPPG+ G+ G RG+PG
Sbjct: 1436 P----PGLPG--------------LKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPG 1477
Query: 223 VPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPG 282
G PG G+ G+ GP GP G G G PG G G KG G G G +G+PGP G PG
Sbjct: 1478 TQGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPG 1537
Query: 283 EQGE 286
GE
Sbjct: 1538 PPGE 1541
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 409 bits (1050), Expect = e-114
Identities = 246/558 (44%), Positives = 284/558 (50%), Gaps = 86/558 (15%)
Query: 112 REAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKIN 171
R AP E P G PG G RG G G GQPGP GPPG G G G +G V P +
Sbjct: 302 RGAPGERGRP-GLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGE--VGPAGS 358
Query: 172 HGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPG------ 225
G A Q R G QG AG GPPGPPG G PG G+ GP G+PG PG
Sbjct: 359 PGSNGAPGQ----RGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARG 414
Query: 226 ---------------EPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVG 270
G+PG+ G G GP G++G G PG+PG G+ G+ G PG G
Sbjct: 415 PPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPG 474
Query: 271 QNGIPGPKGEPGEQGEKGDAGENG---PKGDTGEKGDPGSSAA-GIKGEPGESGRPGQKG 326
NG+PG GE G G +G AG NG KG GE+G PG + G GEPG G PG G
Sbjct: 475 ANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPG 534
Query: 327 EPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPG-RGERGEPGAPGPKG 385
G+PG PG PG G+PG G QGE G PG PG G RG+ G G G +G GAPG G
Sbjct: 535 MRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNG 594
Query: 386 KQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTL 445
++G G GP+G G GE G G GP GP G KGD
Sbjct: 595 ERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGD----------------------- 631
Query: 446 TVTGPPGPPGPQGLQG---PKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLP 502
TGPPGP G QGL G P GE G PG PG G+ G G+ G GD G GE+G GL
Sbjct: 632 --TGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLA 689
Query: 503 GLPGANG------MKGEKGDSGMPGPQG----PSI---------IGPPGPPGPHGPPGPM 543
G PG G +G KG +G PGP G P + +G PGP G G PG
Sbjct: 690 GAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGP 749
Query: 544 GPHGLPG---PKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGE---PGLD 597
G G+PG P+G GP+GP GPAG G++GE GA G PG GP G PG+ GE PG
Sbjct: 750 GADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPA 809
Query: 598 GFPGPRGEKGDLGEKGEK 615
GFPG G+ G+ G KGE+
Sbjct: 810 GFPGAPGQNGEPGGKGER 827
Score = 400 bits (1028), Expect = e-111
Identities = 246/565 (43%), Positives = 280/565 (49%), Gaps = 74/565 (13%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLI 182
GP G G G+ GE G PG PGPQGPPG G+ G QG GP Q L
Sbjct: 582 GPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQ 641
Query: 183 KRRLIKGDQGQAGPPGPPGPPGPRGPPG------DTGKDGPRGMPGVPGEPG------KP 230
G G+ G PG PGP G G PG D G G RG PG+ G PG P
Sbjct: 642 GLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPP 701
Query: 231 GEQGLMGPLGPPGQKGSIGAPGI------------PGMNGQKGEPGLPGAVGQNGIPGPK 278
G +G G GPPG G+ G PG+ PG G KGEPG PGA G G GP+
Sbjct: 702 GPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPR 761
Query: 279 GEPGEQGEKGDAGENGPKGDTGEKGDPG-SSAAGIKGEPGESGRPGQKGEPGLPGLPGLP 337
G G G G AG+ G KG+ G G PG + G GE GE+G PG G PG PG G P
Sbjct: 762 GPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEP 821
Query: 338 GIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPG----RGERGEPGAPGPKGKQGESGTR 393
G KGE G G +GE G PG+ G G G AGPPG +GERG PG PG G G G
Sbjct: 822 GGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLP 881
Query: 394 GPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQR------------ 441
GP GS G+ G G SG+ G GPPG G+ GA +G +A Q
Sbjct: 882 GPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPP 941
Query: 442 -------ITTLT----VTGPPGPPGPQGLQGP---KGEQGSPGIPGMDGE------QGLK 481
I +T + GPPG PGP+G GP KGE G PG G+ GE QGL
Sbjct: 942 GAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLP 1001
Query: 482 GSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPG-PQGPSIIGPPGPPGP---- 536
G G G+PG G G GLPG G+ G KG++G++G PG P P GPPGP GP
Sbjct: 1002 GLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKS 1061
Query: 537 --HGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEP 594
G GP GP G PGP G+ G GP GP G KGE GE+GA G G RG G PG G P
Sbjct: 1062 GDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSP 1121
Query: 595 ------GLDGFPGPRGEKGDLGEKG 613
G G PGP G +G +G G
Sbjct: 1122 GPAGQQGAIGSPGPAGPRGPVGPSG 1146
Score = 399 bits (1024), Expect = e-111
Identities = 239/571 (41%), Positives = 272/571 (47%), Gaps = 111/571 (19%)
Query: 115 PSEC-NCPAGPPGKR---------------GKRGRRGESGPPGQPGPQGPPGPKGDKGEQ 158
P C +CP GP G G G +GPPG PGP G G G G
Sbjct: 138 PGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSP 197
Query: 159 GDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPR 218
G QGP G+ GQAGP GPPGPPG GP G GKDG
Sbjct: 198 GYQGP------------------------PGEPGQAGPSGPPGPPGAIGPSGPAGKDGES 233
Query: 219 GMPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIP--- 275
G PG PGE G PG G+ GP G PG G G G G NG+KGE G PG G+NG+P
Sbjct: 234 GRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGEN 293
Query: 276 ------GPKGEPGEQGE---------------KGDAGENGPKGDTGEKGDPGSSAA---- 310
GP+G PGE+G +G G+ GP G G G PGS A
Sbjct: 294 GAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEV 353
Query: 311 GIKGEPGESGRPGQKGEP------GLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGER 364
G G PG +G PGQ+GEP G G PG PGI G PG G G G+PG PG G R
Sbjct: 354 GPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGAR 413
Query: 365 GEAGPPG-------RGERGEP------GAPGPKGKQGESGTRGPKGSKGDRGEKGD---- 407
G GP G RG GEP G PGP+G++GE+G G G+KG+ G+ G
Sbjct: 414 GPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEP 473
Query: 408 -----SGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGP 462
GA G RG PG +G G I G E G PGP GP+G G
Sbjct: 474 GANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGE----------RGAPGPAGPRGAAGE 523
Query: 463 KGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGP 522
G G PG PGM G G G G G PG G +G G PG PG +G +G+ G G PGP
Sbjct: 524 PGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGP 583
Query: 523 QGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPR 582
+G G PG G G PG GP G PG G GP GP GP GP G++G+ G PGP+
Sbjct: 584 KGND--GAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGD---TGPPGPQ 638
Query: 583 GPYGLPGKDGEPGLDGFPGPRGEKGDLGEKG 613
G GLPG G PG +G PG G KGD G G
Sbjct: 639 GLQGLPGTGGPPGENGKPGEPGPKGDAGAPG 669
Score = 396 bits (1017), Expect = e-110
Identities = 239/553 (43%), Positives = 274/553 (49%), Gaps = 90/553 (16%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLI 182
GP G RG G G G PG PG +G PG G G G GP
Sbjct: 513 GPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGP------------------- 553
Query: 183 KRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPP 242
G QG++G PGPPGP GPRG PG G GP+G G PG+ G+ G G GP GPP
Sbjct: 554 -----PGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPP 608
Query: 243 GQKGSIGAPGIPGMNG---QKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDT 299
G+ G G G PG G KG+ G PG G G+PG G PGE G+ G E GPKGD
Sbjct: 609 GKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPG---EPGPKGDA 665
Query: 300 GEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGL---PG 356
G G PG G G PGE G PG G PGL G G PG +G G GP G PG PG
Sbjct: 666 GAPGAPGGK--GDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPG 723
Query: 357 LPGTKGERGEAGPPG-RGERGEPGAPGPKGKQGESGTRGPKGS------KGDRGEKGDSG 409
L G GERG G PG +G++GEPG PG G G+ G RGP G G G+KG+ G
Sbjct: 724 LQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGG 783
Query: 410 AQG------PRGPPGQKGDQGATEIIDY------NGNLHEALQRITTLT--------VTG 449
A G PRG PG++G+ G + NG +R V G
Sbjct: 784 APGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAG 843
Query: 450 PPG------PPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGG----- 498
PPG PPGPQG++G +G G PG G G +GL G G G+PG G G
Sbjct: 844 PPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDG 903
Query: 499 ----IGLPGLPGANGMKGEKGDSGMPGPQG-PSIIGPPGPPGPHGPPGPMGPHGLPGPKG 553
G G PG+ G+ G KGD+G PG +G P GPPG PGP G G G GL GP G
Sbjct: 904 PPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPG 963
Query: 554 TDGPMGPHGPAGPKGERGEKGA---MGEPGPRGPYGLPG---------KDGEPGLDGFPG 601
GP G GP G KGE G+ GA GE GP GP GLPG +DG PG DG PG
Sbjct: 964 MPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPG 1023
Query: 602 PRGEKGDLGEKGE 614
G G G++GE
Sbjct: 1024 RDGSPGGKGDRGE 1036
Score = 394 bits (1013), Expect = e-109
Identities = 233/563 (41%), Positives = 273/563 (48%), Gaps = 60/563 (10%)
Query: 115 PSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGF 174
P P PP +G +G +G+ GPPG PG G PG G G G GP + G
Sbjct: 89 PQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPGSPGSPGPPGICESCPTGP 148
Query: 175 LSADQQL----IKRRL----IKGDQGQAGPPGPPGPPGP------------RGPPGDTGK 214
+ Q +K + + G G AGPPGPPGPPG +GPPG+ G+
Sbjct: 149 QNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQ 208
Query: 215 DGPRGMPGVPG------------EPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGE 262
GP G PG PG E G+PG G G GPPG KG G PG PGM G +G
Sbjct: 209 AGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGF 268
Query: 263 PGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPG-SSAAGIKGEPGESGR 321
G G G+ G PG KGE G GE G G GP+G GE+G PG AAG +G G G
Sbjct: 269 DGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGS 328
Query: 322 PGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGE---------RGEAGPPG- 371
GQ G PG PG G PG G G +GP G PG G PG +GE +G GPPG
Sbjct: 329 DGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGI 388
Query: 372 ---------RGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGD 422
G G PGAPG G +G G G G+ G RG G+ G G +G PG +G+
Sbjct: 389 NGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGE 448
Query: 423 QGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKG 482
+G I G E + G PG PG GL G GE+G+PG G G G+ G
Sbjct: 449 RGEAGIPGVPGAKGEDGK-------DGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPG 501
Query: 483 SKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPG-PQGPSIIGPPGPPGPHGPPG 541
KG G+ G G G G G PG +G+ G G GMPG P GP G PGPPG G G
Sbjct: 502 EKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESG 561
Query: 542 PMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPG 601
GP G GP+G G MG GP G G G+ G G PG GP G PGK+GE G G PG
Sbjct: 562 RPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGPPG 621
Query: 602 PRGEKGDLGEKGEKVTSPSQHVP 624
P G GD G+ G Q +P
Sbjct: 622 PTGPGGDKGDTGPPGPQGLQGLP 644
Score = 391 bits (1005), Expect = e-109
Identities = 236/559 (42%), Positives = 281/559 (50%), Gaps = 97/559 (17%)
Query: 122 AGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQL 181
AG PG G +G G+ G PG+PG G PG G++G G +GP
Sbjct: 452 AGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPA----------------- 494
Query: 182 IKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGP 241
I G++G AG G PGP GPRG G+ G+DG G PG+ G PG PG G G GP
Sbjct: 495 -GPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGP 553
Query: 242 PGQKGSIGAPGIPGMNGQKGEPGL---------PGAVGQNGI------PGPKGEPGEQGE 286
PG +G G PG PG +G +G+PG+ GA G+NG PGP+G PG+ GE
Sbjct: 554 PGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGE 613
Query: 287 KGDAGENGPKGDTGEKGDPGSSAA-GIKGEPGESGRPGQKGEPGLPG------LPGLPGI 339
G G GP G G+KGD G G++G PG G PG+ G+PG PG PG PG
Sbjct: 614 TGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGG 673
Query: 340 KGEPGFIGPQGEPGL---PGL------PGTKGERGEAGPPGR-------------GERGE 377
KG+ G G +G PGL PGL PG +G +G AGPPG GERG
Sbjct: 674 KGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGG 733
Query: 378 PGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHE 437
G+PGPKG +GE G G G G G +G +G GP GP GQ GD+G G
Sbjct: 734 LGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPG---- 789
Query: 438 ALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGS------KGDMGDPG 491
+ GP G PG +G GP G G PG PG +GE G KG KG+ G PG
Sbjct: 790 ---------IAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPG 840
Query: 492 MTGEKGGIGLPGLPGANGMKGEKGDSG------------MPGPQGPS-IIGPPGPPGPHG 538
+ G GG G G PG G+KGE+G G +PGP G + GPPGP G G
Sbjct: 841 VAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPG 900
Query: 539 PPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGL-- 596
GP GP G G G+ G GP G AG GE+G GA G PG GP G+ G G GL
Sbjct: 901 KDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAG 960
Query: 597 -DGFPGPRGEKGDLGEKGE 614
G PGPRG G G KGE
Sbjct: 961 PPGMPGPRGSPGPQGVKGE 979
Score = 328 bits (841), Expect = 9e-90
Identities = 197/469 (42%), Positives = 232/469 (49%), Gaps = 68/469 (14%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQG----PRMVFPKINHGFLS 176
P G PG+RG+ G G +G PG PG G PG KG++G G++G P + P
Sbjct: 793 PRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGP-------- 844
Query: 177 ADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGK---DGPRGMPGVP---GEPGKP 230
G G AGPPGP G G RG PG G G RG+PG P G PG P
Sbjct: 845 -----------PGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPP 893
Query: 231 GEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDA 290
G G G GPPG G+ GAPG PG++G KG+ G PG G G GP G PG G G
Sbjct: 894 GPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGIT 953
Query: 291 GEN---GPKGDTGEKGDPG-SSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFI 346
G GP G G +G PG G G+PG +G G++G PG GLPGL G GEPG
Sbjct: 954 GARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRD 1013
Query: 347 GPQGEPGLP---GLPGTKGERGEAGPPGR-GERGEPGAPGPKGKQGESGTRGPKGSKGDR 402
G G GLP G PG KG+RGE G PG G G PG PGP G G+SG RG G G
Sbjct: 1014 GNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPA 1073
Query: 403 GEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGP 462
G G +G++G GP G +GD+G T G +G G
Sbjct: 1074 GAPGPAGSRGAPGPQGPRGDKGET----------------------------GERGAAGI 1105
Query: 463 KGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGP 522
KG +G PG PG G G G +G +G PG G +G +G G PG +G G G G PGP
Sbjct: 1106 KGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGP 1165
Query: 523 QG-PSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGER 570
+G G G PG G PGP GP G PGP G +G AG GE+
Sbjct: 1166 RGNRGERGSEGSPGHPGQPGPPGPPGAPGP--CCGGVGAAAIAGIGGEK 1212
Score = 317 bits (811), Expect = 3e-86
Identities = 190/450 (42%), Positives = 225/450 (50%), Gaps = 62/450 (13%)
Query: 114 APSECNCPAGPPGKRGKRGRRGESGPP------GQPGPQGPPGPKGDKGEQGDQGPRMVF 167
AP + P G G+RG G +GE GPP G GP GPPGP+G KGE+G G
Sbjct: 814 APGQNGEPGGK-GERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGA- 871
Query: 168 PKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEP 227
GF G +G GPPG G PGP GP G GKDGP G G G P
Sbjct: 872 ----AGF-------------PGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAP 914
Query: 228 GKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGA---VGQNGIPGPKGEPGEQ 284
G PG G G G PG+KGS GA G PG G G G+ GA G G+PGP+G PG Q
Sbjct: 915 GSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQ 974
Query: 285 GEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPG 344
G KG++G+ G G +GE+G PG G+ G G +G PG+ G PG GLPG G G G
Sbjct: 975 GVKGESGKPGANGLSGERGPPGPQ--GLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKG 1032
Query: 345 FIGPQGEPGLPGLPGTKGERGEAGPPGR-GERGEPGAPGPKGKQGESGTRGPKGSKGDRG 403
G G PG PG PG G G GP G+ G+RGE G GP G G +G+RG G +G RG
Sbjct: 1033 DRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRG 1092
Query: 404 EKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPK 463
+KG++G +G G G +G PG PG G GP
Sbjct: 1093 DKGETGERGAAGIKGHRGF----------------------------PGNPGAPGSPGPA 1124
Query: 464 GEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQ 523
G+QG+ G PG G +G G G G G +G G IG PG G G +G +G G PG
Sbjct: 1125 GQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQP 1184
Query: 524 GPSIIGPPGPPGP-HGPPGPMGPHGLPGPK 552
GP GPPG PGP G G G+ G K
Sbjct: 1185 GPP--GPPGAPGPCCGGVGAAAIAGIGGEK 1212
Score = 142 bits (359), Expect = 7e-34
Identities = 100/287 (34%), Positives = 116/287 (40%), Gaps = 50/287 (17%)
Query: 377 EPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPR---GPPGQKGDQGATEIIDYNG 433
E P P+ GE P+ G QGP+ GPPG G G I G
Sbjct: 71 ELDCPNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPG 130
Query: 434 N----------------------LHEALQRITTLTV---------TGPPGPPGPQGLQGP 462
+ +++ + + V GPPGPPGP G G
Sbjct: 131 SPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPGTSGH 190
Query: 463 KGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGP 522
G GSPG G GE G G G G PG G G G G G G GE+G G PG
Sbjct: 191 PGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGI 250
Query: 523 QGPSII-------------GPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGE 569
+GP+ I G G G G PG G +GLPG G GPMGP G G +G
Sbjct: 251 KGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGR 310
Query: 570 ---RGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKG 613
G GA G G RG G PG G PG GFPG G KG++G G
Sbjct: 311 PGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAG 357
Score = 59.3 bits (142), Expect = 1e-08
Identities = 39/117 (33%), Positives = 47/117 (40%), Gaps = 35/117 (29%)
Query: 110 IAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPK 169
I P+ P GP G GK G G GP G PGP+G++GE+G +G
Sbjct: 1130 IGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGP------PGPRGNRGERGSEGS------ 1177
Query: 170 INHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGE 226
G GQ GPPGPPG PGP G G + G+ GE
Sbjct: 1178 ------------------PGHPGQPGPPGPPGAPGP-----CCGGVGAAAIAGIGGE 1211
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 408 bits (1048), Expect = e-114
Identities = 245/546 (44%), Positives = 281/546 (51%), Gaps = 62/546 (11%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGF--LSADQQ 180
G G G RGR GE G PG PGP GPPGP G G G+ +M GF + Q
Sbjct: 141 GEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMA-----GGFDEKAGGAQ 195
Query: 181 LIKRRLIKGDQGQAGPPGPPGPPGPRG---------PPGDTGKDGPRGMPGVPG------ 225
L + G G GPPGP G PGP+G PG +G GPRG PG PG
Sbjct: 196 LGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDG 255
Query: 226 EPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQG 285
E GKPG+ G GP GP G +G G PG+PG+ G +G PGL GA G+ G PG KGE G G
Sbjct: 256 EAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPG 315
Query: 286 EKGDAGENGPKGDTGEKGDPG----SSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKG 341
E G G GP+G GE+G G + A G G+PG +G PG G G PG PG PG KG
Sbjct: 316 ENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKG 375
Query: 342 E---------PGFIGPQGEPGLPGLP------------GTKGERGEAGPPG-RGERGEPG 379
E G GP+GEPG PG P G G +G AG PG G G PG
Sbjct: 376 EAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPG 435
Query: 380 APGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEAL 439
GP G QG +G GPKG G+ G G G QGP+G PG G QGA G E
Sbjct: 436 PRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAP------GPAGEEG 489
Query: 440 QRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGI 499
+R G PG GP G G +G G+ G PG DG G KG+ G+ G G+ G KG
Sbjct: 490 KR----GARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGAN 545
Query: 500 GLPGLPGANGMKGEKGDSGMPGPQGP-SIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPM 558
G PG PG G+ G +G +G PG GP +GP G PG G PGP GP G G G G
Sbjct: 546 GDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFP 605
Query: 559 GPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKVTS 618
GP G G G+ GEKG G PG R GLPGKDGE G G PGP G G+ GE+G S
Sbjct: 606 GPKGANGEPGKAGEKGLPGAPGLR---GLPGKDGETGAAGPPGPAGPAGERGEQGAPGPS 662
Query: 619 PSQHVP 624
Q +P
Sbjct: 663 GFQGLP 668
Score = 396 bits (1018), Expect = e-110
Identities = 250/604 (41%), Positives = 289/604 (47%), Gaps = 139/604 (23%)
Query: 115 PSECNCPAGPPGKRGK---RGRRGESGPPGQPGPQGP---PGPKGDKGEQGDQG-PRMVF 167
P P GP G+ G+ G +GE GP G+PGP GP PGP G++G++G +G P V
Sbjct: 442 PQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVG 501
Query: 168 PKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEP 227
P G A +G GQ G GP G PG RGP G G G G PG PGEP
Sbjct: 502 PIGPPGERGAPGN-------RGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEP 554
Query: 228 GKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGI---PGPKG---EP 281
G PG +GL G G G +G +G G PG +G+ G PG GA GQ G+ PGPKG EP
Sbjct: 555 GLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEP 614
Query: 282 GEQGEKG---------------------DAGENGPKGDTGEKGDPGSSA----AGIKGEP 316
G+ GEKG G GP G+ GE+G PG S G G P
Sbjct: 615 GKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPP 674
Query: 317 GESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPG---------LPGLPGTKGERGEA 367
GE G+PG +G PG G PGL G +GE GF G +G PG LPG PGT G +G +
Sbjct: 675 GEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 734
Query: 368 GPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATE 427
GP G PGA GP G QG G RG G G +G++GD G +GP G PG+ G +G
Sbjct: 735 GPAG-----PPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRG--- 786
Query: 428 IIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDM 487
+TGP GPPGP G G KGE G PG G G +G G +G+
Sbjct: 787 -------------------LTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGET 827
Query: 488 GDPGMTGEKGGIGLPGLPGANGMKGE---KGDSGMPGPQGPSII---------------- 528
G PG G G G G PGA G +GE KGD+G PGPQGPS
Sbjct: 828 GPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGAR 887
Query: 529 ---------------------------GPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPH 561
GPPGPPGP G GP G G GP G G G
Sbjct: 888 GAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQ 947
Query: 562 GPAGPKGERGE------KGAMGEPGP------RGPYGLPGKDGEPGLDGFPGPRGEKGDL 609
GPAGP GE+GE GA G PGP RG GLPG+ GE G G PGP GE G
Sbjct: 948 GPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQ 1007
Query: 610 GEKG 613
G G
Sbjct: 1008 GAPG 1011
Score = 395 bits (1016), Expect = e-110
Identities = 231/520 (44%), Positives = 265/520 (50%), Gaps = 38/520 (7%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPG---------------PKGDKGEQGDQGPRM 165
P G PG G G +G SGP G PG QGPPG PKGD+G+ G++GP
Sbjct: 718 PRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEG 777
Query: 166 VFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPG 225
K L+ G++G+ GPPGP G G RG PG+ G+ GP G G G
Sbjct: 778 APGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAG 837
Query: 226 EPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQG 285
PG G+ G G G GQKG GAPG G +G G G G G G G +G PG G
Sbjct: 838 PPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATG 897
Query: 286 EKGDAGENGPKGDTGEKGDPG----SSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKG 341
G AG GP G G G PG S G KG G+SG PG+ GEPGL G G PG KG
Sbjct: 898 FPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKG 957
Query: 342 EPGFIGPQGEPGLPGLPGTKGERGEAGPPG-RGERGEPGAPGPKGKQGESGTRGPKGSKG 400
EPG GP G G PG G G+RG G PG RGERG PG PGP G+ G+ G G G +G
Sbjct: 958 EPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRG 1017
Query: 401 DRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTV-----TGPPGPPG 455
G G G GP G PG++G GA +G R T V GPPG PG
Sbjct: 1018 PPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPG 1077
Query: 456 PQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKG 515
P G G +G++G G G G G G++G G G G+KG G PG G G +G G
Sbjct: 1078 PAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTG 1137
Query: 516 DSGMPGPQGPS----IIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERG 571
G+PGP GPS GP GP GP GPPGP+GP G G G GP+GP GP G GE G
Sbjct: 1138 LQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETG 1197
Query: 572 EKGAMGEPGPRGPYGLPGKDGEPGLD----GFPGPRGEKG 607
G G PGP GP G PG PG+D GPR EKG
Sbjct: 1198 PAGPPGNPGPPGPPGPPG----PGIDMSAFAGLGPR-EKG 1232
Score = 395 bits (1014), Expect = e-110
Identities = 233/561 (41%), Positives = 274/561 (48%), Gaps = 106/561 (18%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGP---------PGPKGDKGEQGDQGPRMVFPKINHG 173
GP G G RG G+ GP G PGP GP PG KG+ G G +GP
Sbjct: 336 GPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGP---------- 385
Query: 174 FLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKD------GPRGMPGVPGEP 227
+G QG G PG PG PGP G G+ G D G G PG+ G P
Sbjct: 386 --------------EGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAP 431
Query: 228 GKPGEQGLMGP---LGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQ 284
G PG +G GP GP G KG G PGI G G++G G PG G G PGP GE G++
Sbjct: 432 GFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKR 491
Query: 285 GEKGDAGENGPKGDTGEKGDPGS-------SAAGIKGEPGE---------SGRPGQKGEP 328
G +G+ G GP G GE+G PG+ AG KG PGE G G G P
Sbjct: 492 GARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRP 551
Query: 329 GLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPG-RGERGEPGAPGPKGKQ 387
G PGLPG G+ G PG GPQG+ G G PG G G GP G RG+ G G PGPKG
Sbjct: 552 GEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGAN 611
Query: 388 GESGTRGPK---------GSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEA 438
GE G G K G G GE G +G GP GP G++G+QGA + G
Sbjct: 612 GEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQG----- 666
Query: 439 LQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGG 498
+ GPPGPPG G G +G G G PG+ G +G +G G+ G PG G +G
Sbjct: 667 --------LPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGP 718
Query: 499 IGLPGLPGANGMKGEKGDSGMPGPQGP-------------SIIGPPGPPGPHGPPGPMGP 545
GLPG PG +G KG G +G PG QGP I GP G G G GP G
Sbjct: 719 RGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGA 778
Query: 546 HGLPGPKGTDGPMGPHGPAGPKGERGE------------KGAMGEPGPRGPYGLPGKDGE 593
G G +G GP+GP GPAG GE+GE +GA GE G GP G G G
Sbjct: 779 PGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGP 838
Query: 594 PGLDGFPGPRGEKGDLGEKGE 614
PG DG PG +GE+G+ G+KG+
Sbjct: 839 PGADGQPGAKGEQGEAGQKGD 859
Score = 394 bits (1011), Expect = e-109
Identities = 236/544 (43%), Positives = 273/544 (50%), Gaps = 81/544 (14%)
Query: 122 AGPPGKRGKRGRRGESGPPGQPGPQG---PPGPKGDKGEQGDQG-------PRMVFPKIN 171
AGPPG G G RGE G PG G QG PPGP G+ G+ GDQG P +V P+
Sbjct: 641 AGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGE 700
Query: 172 HGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPG 231
GF R G QG GP G PG PG GP G +G GP G G PG G PG
Sbjct: 701 RGFPG-------ERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPG 753
Query: 232 EQGLMGPLGPPGQKGSIG------APGIPGMNGQKGEPGLPGAVGQNGI------PGPKG 279
E+G G GP G +G +G APG G G G G PG G NG PGP G
Sbjct: 754 ERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAG 813
Query: 280 EPGEQGEKGDAGENGPKGDTGEKGDPGSSAA-GIKGEPGESGRPGQKGEPGLPGLPGLPG 338
G +G G+ GE GP G G G PG+ G KGE GE+G+ G G PG G G PG
Sbjct: 814 SAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPG 873
Query: 339 IKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGR-GERGEPGAPGPKGKQGESGTRGPKG 397
+G G GP+G G G PG G G AG G G G PG PGP G G+ G +G +G
Sbjct: 874 PQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARG 933
Query: 398 SKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQ 457
G G G+ G QGP GPPG+KG+ G +G GPPGPQ
Sbjct: 934 DSGPPGRAGEPGLQGPAGPPGEKGEPGDDG-------------------PSGAEGPPGPQ 974
Query: 458 GLQGPKG---------EQGSPGIPGMDGEQGLKGSKGDMGD---------PGMTGEKGGI 499
GL G +G E+G PG+PG GE G +G+ G GD PG+TG G
Sbjct: 975 GLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEP 1034
Query: 500 GLPGLPGANGMKGEKGDSGMPGPQGPS-IIGPPGPPGPHGPPGPMGPHGLPGPKG---TD 555
G G PGA+G G G +G+ G +G + +G PG PGP G PGP GP G G +G
Sbjct: 1035 GREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQ 1094
Query: 556 GPMGPHGPAG------PKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDL 609
GPMGP GPAG P+G RG+KG GEPG R GL G G GL G PGP G GD
Sbjct: 1095 GPMGPSGPAGARGIQGPQGPRGDKGEAGEPGER---GLKGHRGFTGLQGLPGPPGPSGDQ 1151
Query: 610 GEKG 613
G G
Sbjct: 1152 GASG 1155
Score = 393 bits (1009), Expect = e-109
Identities = 236/547 (43%), Positives = 274/547 (50%), Gaps = 67/547 (12%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 180
P GPPG GK G GE+G PG+ G +GPPGP+G +G G G V + L +
Sbjct: 241 PRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG 300
Query: 181 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 240
+KG+ G G G PGP GPRG PG+ G+ GP G G G G+PG P G
Sbjct: 301 EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPG------PAG 354
Query: 241 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG 300
PPG G G PG PG G KGE G GA G G GP+GEPG G G AG +G G G
Sbjct: 355 PPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDG 414
Query: 301 EKGDPGSSAA----GIKGEPGESGRPG------------QKGEPGLPGLPGLPGIKGEPG 344
G GS+ A G G PG G PG Q GEPG+ G G G KGEPG
Sbjct: 415 IPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPG 474
Query: 345 FIGPQGEPGLPGLPGTKGERGEAGPPGR-GERGEPGAPGPKGKQGESGTRGPKGSKGDRG 403
GPQG PG G G +G RGE G G G GE GAPG +G G+ G GPKG+ G+RG
Sbjct: 475 PAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERG 534
Query: 404 EKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPK 463
G +G +G G PG+ G+ G G +A + GP G PG G GP
Sbjct: 535 PSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQ----GKVGPSGAPGEDGRPGPP 590
Query: 464 GEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQ 523
G QG+ G PG+ G G KG G+PG GEKG G PGL G G GE G +G PGP
Sbjct: 591 GPQGARGQPGV---MGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPA 647
Query: 524 GPS----IIGPPGPPGPHGPPGPMGP---------HGLPGPKGTDGPMGPHGPAGPKGER 570
GP+ G PGP G G PGP GP G+PG G G +GP G G GER
Sbjct: 648 GPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGER 707
Query: 571 GEKGAMGEPGPR---------------GPYGLPGKDGEPGLDGFP---------GPRGEK 606
G GA G GPR GP G PG G PGL G P GP+G++
Sbjct: 708 GSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDR 767
Query: 607 GDLGEKG 613
GD+GEKG
Sbjct: 768 GDVGEKG 774
Score = 389 bits (1000), Expect = e-108
Identities = 247/617 (40%), Positives = 295/617 (47%), Gaps = 137/617 (22%)
Query: 121 PAGPPGKRGKRGR---RGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSA 177
P G PG+RG G +G +G PG+PG G PG +G G GD GP
Sbjct: 526 PKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGP-------------- 571
Query: 178 DQQLIKRRLIKGDQGQAGPPGP------------PGPPGPRGPPGDTGKDGPRGMPGVPG 225
Q + G+ G+ GPPGP PGP G G PG G+ G G PG+ G
Sbjct: 572 -QGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRG 630
Query: 226 EPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQG 285
PGK GE G GP GP G G G G PG +G +G PG PG G+ G PG +G PGE G
Sbjct: 631 LPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAG 690
Query: 286 EKGDAGENGPKGDTGEKGDPGSSAA-------------GIKGEPGESGRPGQKGEPGLPG 332
G G G +G GE+G PG+ G KG G +G PG +G PGL G
Sbjct: 691 APGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQG 750
Query: 333 LP------GLPGIKGEPGFI---GPQGEPGL------------PGLPGTKGERGEAGPPG 371
+P G+ G KG+ G + GP+G PG PG G GE+GE GPPG
Sbjct: 751 MPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPG 810
Query: 372 ----------RGERGEPGAPGPKGKQGESGTRGPKGSKGDRGE---KGDSGAQGPRGPPG 418
GERGE G PGP G G G G G+KG++GE KGD+GA GP+GP G
Sbjct: 811 PAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSG 870
Query: 419 QKGDQGATEIIDYNG-----------NLHEALQRI---TTLTVTGPPGPPGPQGLQGPKG 464
G QG T + G A R+ + GPPGPPGP G GPKG
Sbjct: 871 APGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKG 930
Query: 465 EQGSPGIPGMDGEQGLK------GSKGDMGD------------PGMTGEKGGIGLPGLPG 506
+G G PG GE GL+ G KG+ GD G+ G++G +GLPG G
Sbjct: 931 ARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRG 990
Query: 507 ANGMKGEKGDSGMPGPQG-PSIIGPPGPPGPHGPPGPMGPHGLPGPKGT---DGPMGPHG 562
G G G SG PG QG P G GPPGP GPPG GP G PG +G+ DGP G G
Sbjct: 991 ERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDG 1050
Query: 563 PAGPKGERGEKGAMGEPGPRGPYGLPGKDGEP------------------------GLDG 598
AG KG+RGE GA+G PG GP G PG G G+ G
Sbjct: 1051 AAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQG 1110
Query: 599 FPGPRGEKGDLGEKGEK 615
GPRG+KG+ GE GE+
Sbjct: 1111 PQGPRGDKGEAGEPGER 1127
Score = 388 bits (997), Expect = e-108
Identities = 235/530 (44%), Positives = 267/530 (50%), Gaps = 72/530 (13%)
Query: 121 PAGPPGKRGKRGRRGE------SGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGF 174
PAG PG +G +G GE SGP G GP GPPG GD GE G G
Sbjct: 214 PAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGK----------- 262
Query: 175 LSADQQLIKRRLIKGDQGQAGPPGPPGPP---GPRGPPGDTGKDGPRGMPGVPGEPGKPG 231
R G QG G PG PG P G RG PG G G G PGV GE G PG
Sbjct: 263 -------AGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPG 315
Query: 232 EQGLMGPLGP---PGQKGSIGAPGIPGMNGQKGEP---GLPGAVGQNGIPGPKGEPGEQG 285
E G GP+GP PG++G G G G G G+P G PG VG G PG G PG +G
Sbjct: 316 ENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKG 375
Query: 286 EKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGF 345
E G G GP+G G +G+PG+ G G G SG PG G PG G G PGI G PGF
Sbjct: 376 EAGPTGARGPEGAQGPRGEPGT--PGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGF 433
Query: 346 IGPQGEPGLPGLPGTKGERGEAGPPG----RGERGEPGAPGPKGKQGESGTRGPKGSKGD 401
GP+G PG G G G +G+ G PG +GE+G G PGP G Q G GP G +G
Sbjct: 434 PGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQ---GAPGPAGEEGK 490
Query: 402 RGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQG 461
RG +G+ G GP GPPG++G G +G G PG GP GL G
Sbjct: 491 RGARGEPGGVGPIGPPGERGAPGNRGFPGQDG----------LAGPKGAPGERGPSGLAG 540
Query: 462 PK---GEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGG---IGLPGLPGANGMKGEKG 515
PK G+ G PG PG+ G +GL G GD G G G G G PG PG G +G+ G
Sbjct: 541 PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG 600
Query: 516 DSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGA 575
G PGP+G + G PG G G PG G GLPG G G GP GPAGP GERGE+GA
Sbjct: 601 VMGFPGPKGAN--GEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGA 658
Query: 576 ---------MGEPGPRGPYGLPGKDGEPGLDGFP---GPRGEKGDLGEKG 613
G PGP G G PG G PG G P GPRGE+G GE+G
Sbjct: 659 PGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERG 708
Score = 362 bits (928), Expect = e-100
Identities = 232/575 (40%), Positives = 263/575 (45%), Gaps = 141/575 (24%)
Query: 147 GPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPR 206
G PGPKG KGE GD IK G GPPGP GP G +
Sbjct: 98 GQPGPKGQKGEPGD--------------------------IKDIVGPKGPPGPQGPAGEQ 131
Query: 207 GPPGDTGKDG------PRGMPGVPGEPGKPGE---------------------------- 232
GP GD G G PRG G PG PG PG
Sbjct: 132 GPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKA 191
Query: 233 --------QGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGA---VGQNGIPGPKGEP 281
QG MGP+GP G G GAPG G G GEPG PG +G G PGP G+P
Sbjct: 192 GGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKP 251
Query: 282 GEQGE---KGDAGENGPKGDTGEKGDPG----------------------SSAAGIKGE- 315
G+ GE G AGE GP G G +G PG + A G+KGE
Sbjct: 252 GDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGES 311
Query: 316 --PGESGRPGQKGEPGLP---------------GLPGLPGIKGEPGFIGPQGEPGLPGLP 358
PGE+G PG G GLP G G PG G PG +GP G PG PG P
Sbjct: 312 GSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAP 371
Query: 359 GTKGERGEAGPPG-------RGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQ 411
G KGE G G G RGE G PG+PGP G G GT G G+KG G G +GA
Sbjct: 372 GAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAP 431
Query: 412 GPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGI 471
G GP G G QGAT + G E + G G GP+G GP G QG+PG
Sbjct: 432 GFPGPRGPPGPQGATGPLGPKGQTGEP-------GIAGFKGEQGPKGEPGPAGPQGAPGP 484
Query: 472 PGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGM------KGEKGDSGMPGPQG- 524
G +G++G +G G +G G GE+G G G PG +G+ GE+G SG+ GP+G
Sbjct: 485 AGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGA 544
Query: 525 ---PSIIGPPGPPGPH---GPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGE 578
P G PG PG G PG GP G GP G G G GP GP+G RG+ G MG
Sbjct: 545 NGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGF 604
Query: 579 PGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKG 613
PGP+G G PGK GE GL G PG RG G GE G
Sbjct: 605 PGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETG 639
Score = 249 bits (637), Expect = 4e-66
Identities = 159/390 (40%), Positives = 192/390 (49%), Gaps = 65/390 (16%)
Query: 112 REAPSECNCPAGPPGKR------GKRGRRGESGPP---GQPGPQGPPGPKGDKGEQGDQG 162
R P N GPPG G +G RG+SGPP G+PG QGP GP G+KGE GD G
Sbjct: 904 RVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG 963
Query: 163 PRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPP---GDTGKDGPRG 219
P L+ + ++ +G++G G PGP G PG +G P GD G GP G
Sbjct: 964 PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVG 1023
Query: 220 MPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKG 279
PG+ G G+PG +G G GPPG+ GA G+ G G+ G G PGA G G PGP G
Sbjct: 1024 PPGLTGPAGEPGREGSPGADGPPGRD---GAAGVKGDRGETGAVGAPGAPGPPGSPGPAG 1080
Query: 280 EPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGI 339
G+QG++G+AG GP G +G G A GI+G G G G+ GEPG GL
Sbjct: 1081 PTGKQGDRGEAGAQGPMGPSGPAG-----ARGIQGPQGPRGDKGEAGEPGERGL------ 1129
Query: 340 KGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSK 399
KG GF G QG PG PG G +G G AGP G RG PG GP GK G +G GP G
Sbjct: 1130 KGHRGFTGLQGLPGPPGPSGDQGASGPAGP--SGPRGPPGPVGPSGKDGANGIPGPIGPP 1187
Query: 400 GDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGP--- 456
G RG G++G GP G PG GPPGPPGP
Sbjct: 1188 GPRGRSGETGPAGPPGNPGP----------------------------PGPPGPPGPGID 1219
Query: 457 ----QGLQGPKGEQGSPGIPGMDGEQGLKG 482
GL GP+ E+G + M +Q G
Sbjct: 1220 MSAFAGL-GPR-EKGPDPLQYMRADQAAGG 1247
Score = 64.3 bits (155), Expect = 3e-10
Identities = 38/97 (39%), Positives = 45/97 (46%), Gaps = 16/97 (16%)
Query: 533 PPGPHGPPGPMGPHGLPGPKGTDGP-------------MGPHGPAGPKGERGEKGAMGEP 579
P P G P+ P L G GP +GP GP GP+G GE+G G+
Sbjct: 78 PEIPFGECCPICPTDLATASGQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDR 137
Query: 580 GPRGPYGLP---GKDGEPGLDGFPGPRGEKGDLGEKG 613
G +G G P G+DGEPG G PGP G G G G
Sbjct: 138 GDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPG 174
Score = 44.3 bits (103), Expect = 4e-04
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 557 PMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPG--KD-----GEPGLDGFPGPRGEKGDL 609
P P G P A G+PGP+G G PG KD G PG G G +G +GD
Sbjct: 78 PEIPFGECCPICPTDLATASGQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDR 137
Query: 610 GEKGEK 615
G+KGEK
Sbjct: 138 GDKGEK 143
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 408 bits (1048), Expect = e-114
Identities = 245/546 (44%), Positives = 281/546 (51%), Gaps = 62/546 (11%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGF--LSADQQ 180
G G G RGR GE G PG PGP GPPGP G G G+ +M GF + Q
Sbjct: 72 GEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMA-----GGFDEKAGGAQ 126
Query: 181 LIKRRLIKGDQGQAGPPGPPGPPGPRG---------PPGDTGKDGPRGMPGVPG------ 225
L + G G GPPGP G PGP+G PG +G GPRG PG PG
Sbjct: 127 LGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDG 186
Query: 226 EPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQG 285
E GKPG+ G GP GP G +G G PG+PG+ G +G PGL GA G+ G PG KGE G G
Sbjct: 187 EAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPG 246
Query: 286 EKGDAGENGPKGDTGEKGDPG----SSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKG 341
E G G GP+G GE+G G + A G G+PG +G PG G G PG PG PG KG
Sbjct: 247 ENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKG 306
Query: 342 E---------PGFIGPQGEPGLPGLP------------GTKGERGEAGPPG-RGERGEPG 379
E G GP+GEPG PG P G G +G AG PG G G PG
Sbjct: 307 EAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPG 366
Query: 380 APGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEAL 439
GP G QG +G GPKG G+ G G G QGP+G PG G QGA G E
Sbjct: 367 PRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAP------GPAGEEG 420
Query: 440 QRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGI 499
+R G PG GP G G +G G+ G PG DG G KG+ G+ G G+ G KG
Sbjct: 421 KR----GARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGAN 476
Query: 500 GLPGLPGANGMKGEKGDSGMPGPQGP-SIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPM 558
G PG PG G+ G +G +G PG GP +GP G PG G PGP GP G G G G
Sbjct: 477 GDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFP 536
Query: 559 GPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKVTS 618
GP G G G+ GEKG G PG R GLPGKDGE G G PGP G G+ GE+G S
Sbjct: 537 GPKGANGEPGKAGEKGLPGAPGLR---GLPGKDGETGAAGPPGPAGPAGERGEQGAPGPS 593
Query: 619 PSQHVP 624
Q +P
Sbjct: 594 GFQGLP 599
Score = 396 bits (1018), Expect = e-110
Identities = 250/604 (41%), Positives = 289/604 (47%), Gaps = 139/604 (23%)
Query: 115 PSECNCPAGPPGKRGK---RGRRGESGPPGQPGPQGP---PGPKGDKGEQGDQG-PRMVF 167
P P GP G+ G+ G +GE GP G+PGP GP PGP G++G++G +G P V
Sbjct: 373 PQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVG 432
Query: 168 PKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEP 227
P G A +G GQ G GP G PG RGP G G G G PG PGEP
Sbjct: 433 PIGPPGERGAPGN-------RGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEP 485
Query: 228 GKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGI---PGPKG---EP 281
G PG +GL G G G +G +G G PG +G+ G PG GA GQ G+ PGPKG EP
Sbjct: 486 GLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEP 545
Query: 282 GEQGEKG---------------------DAGENGPKGDTGEKGDPGSSA----AGIKGEP 316
G+ GEKG G GP G+ GE+G PG S G G P
Sbjct: 546 GKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPP 605
Query: 317 GESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPG---------LPGLPGTKGERGEA 367
GE G+PG +G PG G PGL G +GE GF G +G PG LPG PGT G +G +
Sbjct: 606 GEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGAS 665
Query: 368 GPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATE 427
GP G PGA GP G QG G RG G G +G++GD G +GP G PG+ G +G
Sbjct: 666 GPAG-----PPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRG--- 717
Query: 428 IIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDM 487
+TGP GPPGP G G KGE G PG G G +G G +G+
Sbjct: 718 -------------------LTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGET 758
Query: 488 GDPGMTGEKGGIGLPGLPGANGMKGE---KGDSGMPGPQGPSII---------------- 528
G PG G G G G PGA G +GE KGD+G PGPQGPS
Sbjct: 759 GPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGAR 818
Query: 529 ---------------------------GPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPH 561
GPPGPPGP G GP G G GP G G G
Sbjct: 819 GAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQ 878
Query: 562 GPAGPKGERGE------KGAMGEPGP------RGPYGLPGKDGEPGLDGFPGPRGEKGDL 609
GPAGP GE+GE GA G PGP RG GLPG+ GE G G PGP GE G
Sbjct: 879 GPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQ 938
Query: 610 GEKG 613
G G
Sbjct: 939 GAPG 942
Score = 395 bits (1016), Expect = e-110
Identities = 241/570 (42%), Positives = 281/570 (49%), Gaps = 92/570 (16%)
Query: 114 APSECNCPAGPPGKRGKRGRRGESGP---------PGQPGPQGPPGPKGDKGEQGDQGPR 164
+P E P GP G RG G RG +GP GQPGP GPPGP G G G G
Sbjct: 244 SPGENGSP-GPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAP 302
Query: 165 MVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKD------GPR 218
K G A R +G QG G PG PG PGP G G+ G D G
Sbjct: 303 GA--KGEAGPTGA-------RGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSA 353
Query: 219 GMPGVPGEPGKPGEQGLMGP---LGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIP 275
G PG+ G PG PG +G GP GP G KG G PGI G G++G G PG G G P
Sbjct: 354 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAP 413
Query: 276 GPKGEPGEQGEKGDAGENGPKGDTGEKGDPGS-------SAAGIKGEPGE---------S 319
GP GE G++G +G+ G GP G GE+G PG+ AG KG PGE
Sbjct: 414 GPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPK 473
Query: 320 GRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPG-RGERGEP 378
G G G PG PGLPG G+ G PG GPQG+ G G PG G G GP G RG+ G
Sbjct: 474 GANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVM 533
Query: 379 GAPGPKGKQGESGTRGPK---------GSKGDRGEKGDSGAQGPRGPPGQKGDQGATEII 429
G PGPKG GE G G K G G GE G +G GP GP G++G+QGA
Sbjct: 534 GFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPS 593
Query: 430 DYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGD 489
+ G + GPPGPPG G G +G G G PG+ G +G +G G+ G
Sbjct: 594 GFQG-------------LPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGS 640
Query: 490 PGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGP-------------SIIGPPGPPGP 536
PG G +G GLPG PG +G KG G +G PG QGP I GP G G
Sbjct: 641 PGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGD 700
Query: 537 HGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGE------------KGAMGEPGPRGP 584
G GP G G G +G GP+GP GPAG GE+GE +GA GE G GP
Sbjct: 701 VGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGP 760
Query: 585 YGLPGKDGEPGLDGFPGPRGEKGDLGEKGE 614
G G G PG DG PG +GE+G+ G+KG+
Sbjct: 761 PGPAGFAGPPGADGQPGAKGEQGEAGQKGD 790
Score = 395 bits (1016), Expect = e-110
Identities = 231/520 (44%), Positives = 265/520 (50%), Gaps = 38/520 (7%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPG---------------PKGDKGEQGDQGPRM 165
P G PG G G +G SGP G PG QGPPG PKGD+G+ G++GP
Sbjct: 649 PRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEG 708
Query: 166 VFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPG 225
K L+ G++G+ GPPGP G G RG PG+ G+ GP G G G
Sbjct: 709 APGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAG 768
Query: 226 EPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQG 285
PG G+ G G G GQKG GAPG G +G G G G G G G +G PG G
Sbjct: 769 PPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATG 828
Query: 286 EKGDAGENGPKGDTGEKGDPG----SSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKG 341
G AG GP G G G PG S G KG G+SG PG+ GEPGL G G PG KG
Sbjct: 829 FPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKG 888
Query: 342 EPGFIGPQGEPGLPGLPGTKGERGEAGPPG-RGERGEPGAPGPKGKQGESGTRGPKGSKG 400
EPG GP G G PG G G+RG G PG RGERG PG PGP G+ G+ G G G +G
Sbjct: 889 EPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRG 948
Query: 401 DRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTV-----TGPPGPPG 455
G G G GP G PG++G GA +G R T V GPPG PG
Sbjct: 949 PPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPG 1008
Query: 456 PQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKG 515
P G G +G++G G G G G G++G G G G+KG G PG G G +G G
Sbjct: 1009 PAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTG 1068
Query: 516 DSGMPGPQGPS----IIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERG 571
G+PGP GPS GP GP GP GPPGP+GP G G G GP+GP GP G GE G
Sbjct: 1069 LQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETG 1128
Query: 572 EKGAMGEPGPRGPYGLPGKDGEPGLD----GFPGPRGEKG 607
G G PGP GP G PG PG+D GPR EKG
Sbjct: 1129 PAGPPGNPGPPGPPGPPG----PGIDMSAFAGLGPR-EKG 1163
Score = 394 bits (1011), Expect = e-109
Identities = 236/544 (43%), Positives = 273/544 (50%), Gaps = 81/544 (14%)
Query: 122 AGPPGKRGKRGRRGESGPPGQPGPQG---PPGPKGDKGEQGDQG-------PRMVFPKIN 171
AGPPG G G RGE G PG G QG PPGP G+ G+ GDQG P +V P+
Sbjct: 572 AGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGE 631
Query: 172 HGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPG 231
GF R G QG GP G PG PG GP G +G GP G G PG G PG
Sbjct: 632 RGFPG-------ERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPG 684
Query: 232 EQGLMGPLGPPGQKGSIG------APGIPGMNGQKGEPGLPGAVGQNGI------PGPKG 279
E+G G GP G +G +G APG G G G G PG G NG PGP G
Sbjct: 685 ERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAG 744
Query: 280 EPGEQGEKGDAGENGPKGDTGEKGDPGSSAA-GIKGEPGESGRPGQKGEPGLPGLPGLPG 338
G +G G+ GE GP G G G PG+ G KGE GE+G+ G G PG G G PG
Sbjct: 745 SAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPG 804
Query: 339 IKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGR-GERGEPGAPGPKGKQGESGTRGPKG 397
+G G GP+G G G PG G G AG G G G PG PGP G G+ G +G +G
Sbjct: 805 PQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARG 864
Query: 398 SKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQ 457
G G G+ G QGP GPPG+KG+ G +G GPPGPQ
Sbjct: 865 DSGPPGRAGEPGLQGPAGPPGEKGEPGDDG-------------------PSGAEGPPGPQ 905
Query: 458 GLQGPKG---------EQGSPGIPGMDGEQGLKGSKGDMGD---------PGMTGEKGGI 499
GL G +G E+G PG+PG GE G +G+ G GD PG+TG G
Sbjct: 906 GLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEP 965
Query: 500 GLPGLPGANGMKGEKGDSGMPGPQGPS-IIGPPGPPGPHGPPGPMGPHGLPGPKG---TD 555
G G PGA+G G G +G+ G +G + +G PG PGP G PGP GP G G +G
Sbjct: 966 GREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQ 1025
Query: 556 GPMGPHGPAG------PKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDL 609
GPMGP GPAG P+G RG+KG GEPG R GL G G GL G PGP G GD
Sbjct: 1026 GPMGPSGPAGARGIQGPQGPRGDKGEAGEPGER---GLKGHRGFTGLQGLPGPPGPSGDQ 1082
Query: 610 GEKG 613
G G
Sbjct: 1083 GASG 1086
Score = 393 bits (1009), Expect = e-109
Identities = 236/547 (43%), Positives = 274/547 (50%), Gaps = 67/547 (12%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 180
P GPPG GK G GE+G PG+ G +GPPGP+G +G G G V + L +
Sbjct: 172 PRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG 231
Query: 181 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 240
+KG+ G G G PGP GPRG PG+ G+ GP G G G G+PG P G
Sbjct: 232 EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPG------PAG 285
Query: 241 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG 300
PPG G G PG PG G KGE G GA G G GP+GEPG G G AG +G G G
Sbjct: 286 PPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDG 345
Query: 301 EKGDPGSSAA----GIKGEPGESGRPG------------QKGEPGLPGLPGLPGIKGEPG 344
G GS+ A G G PG G PG Q GEPG+ G G G KGEPG
Sbjct: 346 IPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPG 405
Query: 345 FIGPQGEPGLPGLPGTKGERGEAGPPGR-GERGEPGAPGPKGKQGESGTRGPKGSKGDRG 403
GPQG PG G G +G RGE G G G GE GAPG +G G+ G GPKG+ G+RG
Sbjct: 406 PAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERG 465
Query: 404 EKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPK 463
G +G +G G PG+ G+ G G +A + GP G PG G GP
Sbjct: 466 PSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQ----GKVGPSGAPGEDGRPGPP 521
Query: 464 GEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQ 523
G QG+ G PG+ G G KG G+PG GEKG G PGL G G GE G +G PGP
Sbjct: 522 GPQGARGQPGV---MGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPA 578
Query: 524 GPS----IIGPPGPPGPHGPPGPMGP---------HGLPGPKGTDGPMGPHGPAGPKGER 570
GP+ G PGP G G PGP GP G+PG G G +GP G G GER
Sbjct: 579 GPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGER 638
Query: 571 GEKGAMGEPGPR---------------GPYGLPGKDGEPGLDGFP---------GPRGEK 606
G GA G GPR GP G PG G PGL G P GP+G++
Sbjct: 639 GSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDR 698
Query: 607 GDLGEKG 613
GD+GEKG
Sbjct: 699 GDVGEKG 705
Score = 389 bits (1000), Expect = e-108
Identities = 247/617 (40%), Positives = 295/617 (47%), Gaps = 137/617 (22%)
Query: 121 PAGPPGKRGKRGR---RGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSA 177
P G PG+RG G +G +G PG+PG G PG +G G GD GP
Sbjct: 457 PKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGP-------------- 502
Query: 178 DQQLIKRRLIKGDQGQAGPPGP------------PGPPGPRGPPGDTGKDGPRGMPGVPG 225
Q + G+ G+ GPPGP PGP G G PG G+ G G PG+ G
Sbjct: 503 -QGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRG 561
Query: 226 EPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQG 285
PGK GE G GP GP G G G G PG +G +G PG PG G+ G PG +G PGE G
Sbjct: 562 LPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAG 621
Query: 286 EKGDAGENGPKGDTGEKGDPGSSAA-------------GIKGEPGESGRPGQKGEPGLPG 332
G G G +G GE+G PG+ G KG G +G PG +G PGL G
Sbjct: 622 APGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQG 681
Query: 333 LP------GLPGIKGEPGFI---GPQGEPGL------------PGLPGTKGERGEAGPPG 371
+P G+ G KG+ G + GP+G PG PG G GE+GE GPPG
Sbjct: 682 MPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPG 741
Query: 372 ----------RGERGEPGAPGPKGKQGESGTRGPKGSKGDRGE---KGDSGAQGPRGPPG 418
GERGE G PGP G G G G G+KG++GE KGD+GA GP+GP G
Sbjct: 742 PAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSG 801
Query: 419 QKGDQGATEIIDYNG-----------NLHEALQRI---TTLTVTGPPGPPGPQGLQGPKG 464
G QG T + G A R+ + GPPGPPGP G GPKG
Sbjct: 802 APGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKG 861
Query: 465 EQGSPGIPGMDGEQGLK------GSKGDMGD------------PGMTGEKGGIGLPGLPG 506
+G G PG GE GL+ G KG+ GD G+ G++G +GLPG G
Sbjct: 862 ARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRG 921
Query: 507 ANGMKGEKGDSGMPGPQG-PSIIGPPGPPGPHGPPGPMGPHGLPGPKGT---DGPMGPHG 562
G G G SG PG QG P G GPPGP GPPG GP G PG +G+ DGP G G
Sbjct: 922 ERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDG 981
Query: 563 PAGPKGERGEKGAMGEPGPRGPYGLPGKDGEP------------------------GLDG 598
AG KG+RGE GA+G PG GP G PG G G+ G
Sbjct: 982 AAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQG 1041
Query: 599 FPGPRGEKGDLGEKGEK 615
GPRG+KG+ GE GE+
Sbjct: 1042 PQGPRGDKGEAGEPGER 1058
Score = 388 bits (997), Expect = e-108
Identities = 235/530 (44%), Positives = 267/530 (50%), Gaps = 72/530 (13%)
Query: 121 PAGPPGKRGKRGRRGE------SGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGF 174
PAG PG +G +G GE SGP G GP GPPG GD GE G G
Sbjct: 145 PAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGK----------- 193
Query: 175 LSADQQLIKRRLIKGDQGQAGPPGPPGPP---GPRGPPGDTGKDGPRGMPGVPGEPGKPG 231
R G QG G PG PG P G RG PG G G G PGV GE G PG
Sbjct: 194 -------AGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPG 246
Query: 232 EQGLMGPLGP---PGQKGSIGAPGIPGMNGQKGEP---GLPGAVGQNGIPGPKGEPGEQG 285
E G GP+GP PG++G G G G G G+P G PG VG G PG G PG +G
Sbjct: 247 ENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKG 306
Query: 286 EKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGF 345
E G G GP+G G +G+PG+ G G G SG PG G PG G G PGI G PGF
Sbjct: 307 EAGPTGARGPEGAQGPRGEPGT--PGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGF 364
Query: 346 IGPQGEPGLPGLPGTKGERGEAGPPG----RGERGEPGAPGPKGKQGESGTRGPKGSKGD 401
GP+G PG G G G +G+ G PG +GE+G G PGP G Q G GP G +G
Sbjct: 365 PGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQ---GAPGPAGEEGK 421
Query: 402 RGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQG 461
RG +G+ G GP GPPG++G G +G G PG GP GL G
Sbjct: 422 RGARGEPGGVGPIGPPGERGAPGNRGFPGQDG----------LAGPKGAPGERGPSGLAG 471
Query: 462 PK---GEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGG---IGLPGLPGANGMKGEKG 515
PK G+ G PG PG+ G +GL G GD G G G G G PG PG G +G+ G
Sbjct: 472 PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG 531
Query: 516 DSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGA 575
G PGP+G + G PG G G PG G GLPG G G GP GPAGP GERGE+GA
Sbjct: 532 VMGFPGPKGAN--GEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGA 589
Query: 576 ---------MGEPGPRGPYGLPGKDGEPGLDGFP---GPRGEKGDLGEKG 613
G PGP G G PG G PG G P GPRGE+G GE+G
Sbjct: 590 PGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERG 639
Score = 360 bits (923), Expect = 3e-99
Identities = 231/573 (40%), Positives = 262/573 (45%), Gaps = 141/573 (24%)
Query: 149 PGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGP 208
PGPKG KGE GD IK G GPPGP GP G +GP
Sbjct: 31 PGPKGQKGEPGD--------------------------IKDIVGPKGPPGPQGPAGEQGP 64
Query: 209 PGDTGKDG------PRGMPGVPGEPGKPGE------------------------------ 232
GD G G PRG G PG PG PG
Sbjct: 65 RGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGG 124
Query: 233 ------QGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGA---VGQNGIPGPKGEPGE 283
QG MGP+GP G G GAPG G G GEPG PG +G G PGP G+PG+
Sbjct: 125 AQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGD 184
Query: 284 QGE---KGDAGENGPKGDTGEKGDPG----------------------SSAAGIKGE--- 315
GE G AGE GP G G +G PG + A G+KGE
Sbjct: 185 DGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGS 244
Query: 316 PGESGRPGQKGEPGLP---------------GLPGLPGIKGEPGFIGPQGEPGLPGLPGT 360
PGE+G PG G GLP G G PG G PG +GP G PG PG PG
Sbjct: 245 PGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGA 304
Query: 361 KGERGEAGPPG-------RGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGP 413
KGE G G G RGE G PG+PGP G G GT G G+KG G G +GA G
Sbjct: 305 KGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGF 364
Query: 414 RGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPG 473
GP G G QGAT + G E + G G GP+G GP G QG+PG G
Sbjct: 365 PGPRGPPGPQGATGPLGPKGQTGEP-------GIAGFKGEQGPKGEPGPAGPQGAPGPAG 417
Query: 474 MDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGM------KGEKGDSGMPGPQG--- 524
+G++G +G G +G G GE+G G G PG +G+ GE+G SG+ GP+G
Sbjct: 418 EEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANG 477
Query: 525 -PSIIGPPGPPGPH---GPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPG 580
P G PG PG G PG GP G GP G G G GP GP+G RG+ G MG PG
Sbjct: 478 DPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPG 537
Query: 581 PRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKG 613
P+G G PGK GE GL G PG RG G GE G
Sbjct: 538 PKGANGEPGKAGEKGLPGAPGLRGLPGKDGETG 570
Score = 251 bits (642), Expect = 1e-66
Identities = 165/451 (36%), Positives = 186/451 (41%), Gaps = 137/451 (30%)
Query: 289 DAGENGPKGDTGEKGD----------PGSSA-------------AGIKGEPGESGRPGQK 325
D + GPKG GE GD PG G KG PG GR G+
Sbjct: 27 DVRQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEP 86
Query: 326 GEPGLPGLPGLPGIKGEP------------------------------------------ 343
G PG PG PG PG G P
Sbjct: 87 GTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPA 146
Query: 344 ------GFIGPQGEPGLPGLPGTKGERGEAGPPGR-------------GERGEPGA---- 380
GF G GEPG PG+ G G RG GPPG+ GERG PG
Sbjct: 147 GAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGAR 206
Query: 381 -----------------PGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQ 423
PG G +GE+G G KG G GE G G GPRG PG++G
Sbjct: 207 GFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRT 266
Query: 424 GATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGE------ 477
G GN G PGP GP G GP G G PG PG GE
Sbjct: 267 GPAGAAGARGN-------------DGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGA 313
Query: 478 QGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQG-PSIIGPPGPPGP 536
+G +G++G G+PG G G G G PG +G+ G KG +G PG G P GP GPPGP
Sbjct: 314 RGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGP 373
Query: 537 HGPPGPMGPHGL------------PGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGP 584
G GP+GP G GPKG GP GP G GP GE G++GA GEPG GP
Sbjct: 374 QGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGP 433
Query: 585 YGLPGKDGEPGLDGFPGPRGEKGDLGEKGEK 615
G PG+ G PG GFPG G G G GE+
Sbjct: 434 IGPPGERGAPGNRGFPGQDGLAGPKGAPGER 464
Score = 249 bits (637), Expect = 4e-66
Identities = 159/390 (40%), Positives = 192/390 (49%), Gaps = 65/390 (16%)
Query: 112 REAPSECNCPAGPPGKR------GKRGRRGESGPP---GQPGPQGPPGPKGDKGEQGDQG 162
R P N GPPG G +G RG+SGPP G+PG QGP GP G+KGE GD G
Sbjct: 835 RVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKGEPGDDG 894
Query: 163 PRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPP---GDTGKDGPRG 219
P L+ + ++ +G++G G PGP G PG +G P GD G GP G
Sbjct: 895 PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVG 954
Query: 220 MPGVPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKG 279
PG+ G G+PG +G G GPPG+ GA G+ G G+ G G PGA G G PGP G
Sbjct: 955 PPGLTGPAGEPGREGSPGADGPPGRD---GAAGVKGDRGETGAVGAPGAPGPPGSPGPAG 1011
Query: 280 EPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGI 339
G+QG++G+AG GP G +G G A GI+G G G G+ GEPG GL
Sbjct: 1012 PTGKQGDRGEAGAQGPMGPSGPAG-----ARGIQGPQGPRGDKGEAGEPGERGL------ 1060
Query: 340 KGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSK 399
KG GF G QG PG PG G +G G AGP G RG PG GP GK G +G GP G
Sbjct: 1061 KGHRGFTGLQGLPGPPGPSGDQGASGPAGP--SGPRGPPGPVGPSGKDGANGIPGPIGPP 1118
Query: 400 GDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGP--- 456
G RG G++G GP G PG GPPGPPGP
Sbjct: 1119 GPRGRSGETGPAGPPGNPGP----------------------------PGPPGPPGPGID 1150
Query: 457 ----QGLQGPKGEQGSPGIPGMDGEQGLKG 482
GL GP+ E+G + M +Q G
Sbjct: 1151 MSAFAGL-GPR-EKGPDPLQYMRADQAAGG 1178
Score = 228 bits (580), Expect = 2e-59
Identities = 139/325 (42%), Positives = 162/325 (49%), Gaps = 37/325 (11%)
Query: 309 AAGIKGEPGESGRPGQKGEPGLPG-LPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEA 367
AA ++ + + +PG KG+ G PG + + G KG PG GP GE G G G KGE+G
Sbjct: 18 AAVLRCQGQDVRQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAP 77
Query: 368 GPPGR-GERGEPGAPGPKGKQGESGTRGPKGS-----KGDRGEK----------GDSGAQ 411
GP GR GE G PG PGP G G G G G+ G EK G G
Sbjct: 78 GPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPM 137
Query: 412 GPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGI 471
GPRGPPG G G + GN G PG PG G GP+G G PG
Sbjct: 138 GPRGPPGPAGAPGPQ---GFQGN-------------PGEPGEPGVSGPMGPRGPPGPPGK 181
Query: 472 PGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQG-PSIIGP 530
PG DGE G G G+ G PG G +G G PGLPG G +G G G G G P + G
Sbjct: 182 PGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGE 241
Query: 531 PGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGK 590
G PG +G PGPMGP GLPG +G GP G AG +G G+ G G PGP GP G PG
Sbjct: 242 SGSPGENGSPGPMGPRGLPGERGRTGPA---GAAGARGNDGQPGPAGPPGPVGPAGGPGF 298
Query: 591 DGEPGLDGFPGPRGEKGDLGEKGEK 615
G PG G GP G +G G +G +
Sbjct: 299 PGAPGAKGEAGPTGARGPEGAQGPR 323
>gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens]
Length = 703
Score = 406 bits (1044), Expect = e-113
Identities = 273/710 (38%), Positives = 333/710 (46%), Gaps = 170/710 (23%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQG 147
+ +V +LL +K H + R A + CNCP P +G GR PG PG +G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP---PAFQGPTGR------PGLPGDKG 137
Query: 148 PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRG 207
G G G GD G ++ P+ G GQ G G PG PGP G
Sbjct: 138 AIGMPGRVGSPGDAGLSIIGPR-------------------GPPGQPGTRGFPGFPGPIG 178
Query: 208 PPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQ----------------------- 244
G G GP+G G+ G PG+PG QG G G G+
Sbjct: 179 LDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALK 238
Query: 245 ------------------------------KGSIGAPGIPGMNGQKGEPGLPGAVGQNGI 274
+G G PG PG +G G PGLPG +G G+
Sbjct: 239 LLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGL 298
Query: 275 ---PGPKGEPGEQ---GEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEP 328
PGPKG+PG Q G KG+ G G G G KG PG + AG+KGEPG G G+KG
Sbjct: 299 PGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAE 358
Query: 329 GLPGLPGLPGIKGEPG-----FIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGP 383
G PGLPGL G KGE G G +GEPG PGLPG G +GEAG G+ G PG PG
Sbjct: 359 GSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVD--GQVGPPGQPGD 416
Query: 384 KGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRIT 443
KG++G +G +GP G KG +GE G KG E++DYNGN++EALQ I
Sbjct: 417 KGERGAAGEQGPDGPKGSKGEPG-------------KG-----EMVDYNGNINEALQEIR 458
Query: 444 TLTVTGPP------GPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGE-- 495
TL + GPP GPPG G+ G KGE G PG PG DGE+G +G GDMG PG G
Sbjct: 459 TLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPG 518
Query: 496 -------KGGIGLPGLPGANGMKGEKGDSGMPGPQGPS----------IIGPPGPP---- 534
KG G PG PG G KGE G +G PG +G + + G PGP
Sbjct: 519 KDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGLQGVPGPKGEAG 578
Query: 535 -----------------GPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMG 577
GP G PG G G PGP GT GP+G GPAGPKGERG KG G
Sbjct: 579 LDGAKGEKGFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPG 638
Query: 578 EPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEK--VTSPSQHVPC 625
GP G GLPG G PG G G RG+KG G KG+K +P PC
Sbjct: 639 MTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPC 688
Score = 154 bits (390), Expect = 2e-37
Identities = 109/283 (38%), Positives = 125/283 (44%), Gaps = 41/283 (14%)
Query: 364 RGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQ--GPRGPPGQKG 421
R EA G P GP G+ G G +G G G G GD+G GPRGPPGQ G
Sbjct: 107 RREAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPG 166
Query: 422 DQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLK 481
+G GP G G G GPKG+ G G PG G QG K
Sbjct: 167 TRGFPGF-------------------PGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQK 207
Query: 482 GSKGDMGD----------PGMTGEKGGIGLPGLPGANGMKGE-----KGDSGMPGPQGPS 526
G KG G+ P I L LP N ++ K + S
Sbjct: 208 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 267
Query: 527 IIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYG 586
I GPPGPPGP GP GP+G GLPGP G P G GP GPKG+ G +G G G RG G
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPGPMG---PPGLPGPPGPKGDPGIQGYHGRKGERGMPG 324
Query: 587 LPGKDGEPGLDGFP--GPRGEKGDLGEKGEKVTSPSQHVPCLI 627
+PGK G G G G +GE G G KGEK S +P L+
Sbjct: 325 MPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLL 367
Score = 154 bits (390), Expect = 2e-37
Identities = 92/211 (43%), Positives = 110/211 (52%), Gaps = 23/211 (10%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPG---PKGDKGEQGDQG-PRMVFPKINHGFLSAD 178
GPPG G++G RG+ G G PGPQGPPG P G KGE G G P K G +
Sbjct: 491 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGEKGETGQAGSP 550
Query: 179 QQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGK------PGE 232
+ KG+ G+ G PG G G GP G+ G DG +G G GE G PG
Sbjct: 551 GE-------KGEAGEKGNPGAEGLQGVPGPKGEAGLDGAKGEKGFQGEKGDRGPLGLPGA 603
Query: 233 QGLMGPLGPPGQKGSIGAPGIPGMNGQ---KGEPGLPGAVGQNGIP---GPKGEPGEQGE 286
GL G GPPG G IG PG G G+ KG+PG+ G G G+P GP G+ G +GE
Sbjct: 604 SGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGE 663
Query: 287 KGDAGENGPKGDTGEKGDPGSSAAGIKGEPG 317
+G G GPKGD G++G PG A GE G
Sbjct: 664 RGKKGSRGPKGDKGDQGAPGLDAPCPLGEDG 694
>gi|22027595 alpha 1 type XIII collagen isoform 12 [Homo sapiens]
Length = 691
Score = 405 bits (1042), Expect = e-113
Identities = 272/698 (38%), Positives = 331/698 (47%), Gaps = 158/698 (22%)
Query: 28 ARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQARIAALESAKGAPSIHLLPDTLDHLKT 87
AR P + L++ ++ L +T +LQAR+ LE+ +G ++T
Sbjct: 37 ARLPSPGSCGLLTLALCSLALSLLAHFRTAELQARVLRLEAERGE----------QQMET 86
Query: 88 MVQEKVERLLAQKSYEHMAKIRIAREAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQG 147
+ +V +LL +K H + R A + CNCP P +G GR PG PG +G
Sbjct: 87 AILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP---PAFQGPTGR------PGLPGDKG 137
Query: 148 PPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRG 207
G G G GD G ++ P+ G GQ G G PG PGP G
Sbjct: 138 AIGMPGRVGSPGDAGLSIIGPR-------------------GPPGQPGTRGFPGFPGPIG 178
Query: 208 PPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQ----------------------- 244
G G GP+G G+ G PG+PG QG G G G+
Sbjct: 179 LDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALK 238
Query: 245 ------------------------------KGSIGAPGIPGMNGQKGEPGLPGAVGQNGI 274
+G G PG PG +G G PGLPG +G G+
Sbjct: 239 LLPLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGL 298
Query: 275 ---PGPKGEPGEQ---GEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEP 328
PGPKG+PG Q G KG+ G G G G KG PG + AG+KGEPG G G+KG
Sbjct: 299 PGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAE 358
Query: 329 GLPGLPGLPGIKGEPG-----FIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGP 383
G PGLPGL G KGE G G +GEPG PGLPG G +GEAG G+ G PG PG
Sbjct: 359 GSPGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVD--GQVGPPGQPGD 416
Query: 384 KGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRIT 443
KG++G +G +GP G KG +GE G KG E++DYNGN++EALQ I
Sbjct: 417 KGERGAAGEQGPDGPKGSKGEPG-------------KG-----EMVDYNGNINEALQEIR 458
Query: 444 TLTVTGPP------GPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGE-- 495
TL + GPP GPPG G+ G KGE G PG PG DGE+G +G GDMG PG G
Sbjct: 459 TLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPG 518
Query: 496 -------KGGIGLPGLPGANGMKGEKGDSGMPGPQGPS-IIGPPGPPGPHGPPGPMGPHG 547
KG G PG PG G KGE G +G PG +G + G PG G G PGP G G
Sbjct: 519 KDGPPGVKGENGHPGSPGEKGEKGETGQAGSPGEKGEAGEKGNPGAEGLQGVPGPKGEAG 578
Query: 548 LPGPK------------------GTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPG 589
L G K GT GP+G GPAGPKGERG KG G GP G GLPG
Sbjct: 579 LDGAKGEKGFQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPG 638
Query: 590 KDGEPGLDGFPGPRGEKGDLGEKGEK--VTSPSQHVPC 625
G PG G G RG+KG G KG+K +P PC
Sbjct: 639 LHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPC 676
Score = 154 bits (390), Expect = 2e-37
Identities = 109/283 (38%), Positives = 125/283 (44%), Gaps = 41/283 (14%)
Query: 364 RGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQ--GPRGPPGQKG 421
R EA G P GP G+ G G +G G G G GD+G GPRGPPGQ G
Sbjct: 107 RREAPKTSPGCNCPPAFQGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPG 166
Query: 422 DQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLK 481
+G GP G G G GPKG+ G G PG G QG K
Sbjct: 167 TRGFPGF-------------------PGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQK 207
Query: 482 GSKGDMGD----------PGMTGEKGGIGLPGLPGANGMKGE-----KGDSGMPGPQGPS 526
G KG G+ P I L LP N ++ K + S
Sbjct: 208 GEKGQCGEYPHRECLSSMPAALRSSQIIALKLLPLLNSVRLAPPPVIKRRTFQGEQSQAS 267
Query: 527 IIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYG 586
I GPPGPPGP GP GP+G GLPGP G P G GP GPKG+ G +G G G RG G
Sbjct: 268 IQGPPGPPGPPGPSGPLGHPGLPGPMG---PPGLPGPPGPKGDPGIQGYHGRKGERGMPG 324
Query: 587 LPGKDGEPGLDGFP--GPRGEKGDLGEKGEKVTSPSQHVPCLI 627
+PGK G G G G +GE G G KGEK S +P L+
Sbjct: 325 MPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLL 367
Score = 153 bits (386), Expect = 5e-37
Identities = 88/207 (42%), Positives = 108/207 (52%), Gaps = 27/207 (13%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLI 182
GPPG G++G RG+ G G PGPQGPPG G G +G+ G H ++
Sbjct: 491 GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENG---------HPGSPGEKGE- 540
Query: 183 KRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDG------PRGMPGVPGEPGKPGEQGLM 236
KG+ GQAG PG G G +G PG G G G+ G GE G GE+G
Sbjct: 541 -----KGETGQAGSPGEKGEAGEKGNPGAEGLQGVPGPKGEAGLDGAKGEKGFQGEKGDR 595
Query: 237 GPLGPPGQKGSIGAPGIPGMNGQ---KGEPGLPGAVGQNGIP---GPKGEPGEQGEKGDA 290
GPLG PG G IG PG G G+ KG+PG+ G G G+P GP G+ G +GE+G
Sbjct: 596 GPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKK 655
Query: 291 GENGPKGDTGEKGDPGSSAAGIKGEPG 317
G GPKGD G++G PG A GE G
Sbjct: 656 GSRGPKGDKGDQGAPGLDAPCPLGEDG 682
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo
sapiens]
Length = 1650
Score = 405 bits (1041), Expect = e-113
Identities = 236/510 (46%), Positives = 268/510 (52%), Gaps = 32/510 (6%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPR--MVFPKINHGFLSADQQ 180
GP G +G+ G G+ GPPG G +G G G G G QGP+ + FP GF A +
Sbjct: 683 GPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFP----GFPGASGE 738
Query: 181 LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG 240
R L G G G GP GP G RGP G TGK G +G G G G PGE+GL GP G
Sbjct: 739 KGARGL-SGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQG 797
Query: 241 PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG 300
P G G G PG PG +G G PG G VG G GP G PG G +G AGE GP G+ G
Sbjct: 798 PNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERG 857
Query: 301 EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT 360
G PG G +G PG +G+ G KG+PG PG PG G G GF G +G PG G PG
Sbjct: 858 HPGPPG--PPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGL 915
Query: 361 KGERGEAGPPG----RGER---------GEPGAPGPKGKQGESGTRGPKGSKGDRGEKGD 407
KG G +GPPG GER G PG PGP+G G +G +G G KG G G
Sbjct: 916 KGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGR 975
Query: 408 SGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRIT--TLTVTGPPGPPGPQGLQGPKGE 465
G QGP G PG G G G + + Q+ T GPPGPPGP G G G
Sbjct: 976 DGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGA 1035
Query: 466 QGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGP 525
G+ G PG G QG G+KGD G G G G IGL GLPG +G KGE GD G
Sbjct: 1036 AGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGP------ 1089
Query: 526 SIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPY 585
+GPPGPPGP GP GP G G GP G G +GP G G GE G G GEPG +GP
Sbjct: 1090 --MGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPR 1147
Query: 586 GLPGKDGEPGLDGFPGPRGEKGDLGEKGEK 615
G G+ GE G G PGP G KG G+ G K
Sbjct: 1148 GERGEKGESGQPGEPGPPGPKGPTGDDGPK 1177
Score = 402 bits (1034), Expect = e-112
Identities = 250/574 (43%), Positives = 282/574 (49%), Gaps = 104/574 (18%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGP------QGPPGPKGDKGEQGDQGPRMVFPKINHGF 174
P G PG+ G RG G GPPG PGP GP GPKG G QG+ GP
Sbjct: 513 PRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGP----------- 561
Query: 175 LSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQG 234
Q + + G QG GP G GP G G PG G DGP G PG G PG G QG
Sbjct: 562 -PGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQG 620
Query: 235 LMGPLGP---PGQKGSIGAPGIPGMNG---QKGEPGLPGAVGQNGIPGPKGEPGEQGEKG 288
GP GP PG +G G GI G+ G +KGE G PG G G+ G +GE G G +G
Sbjct: 621 PSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRG 680
Query: 289 DAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGE---PGF 345
+ G GPKG TG GDPG PG G G+ G PGLPG PG G KG PGF
Sbjct: 681 EDGPEGPKGRTGPTGDPGP--------PGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGF 732
Query: 346 IGPQGEPGLPGLPGTKGERGEAGPPG-RGERGEPGAPGPKGKQGESGTRGPKGSKGDRG- 403
G GE G GL G G RGE GP G RG+RG GA G G +G SG GP G G+RG
Sbjct: 733 PGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGL 792
Query: 404 --EKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPG---PQG 458
+G +G GP+GPPG G G G + TGPPGPPG PQG
Sbjct: 793 PGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGE-------VGFQGKTGPPGPPGVVGPQG 845
Query: 459 LQG---PKGEQGSPGIPGMDGEQGL------KGSKGDMGDPGMTGEKGGIGLPGLPGANG 509
G P GE+G PG PG GEQGL +G+KGD G PG G+ G GL G PG G
Sbjct: 846 AAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERG 905
Query: 510 M---------KGEKGDSGMPGPQGP----------SIIGPPGPPGPHGPPGPMGPHGLPG 550
+ KG +G SG PGP G IGPPG PGP GPPG G G+PG
Sbjct: 906 LPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPG 965
Query: 551 PKG---------TDGPMGPHGPAGP------------------KGERGEKGAMGEPGPRG 583
KG GP+G GPAGP KG +G KG G PGP G
Sbjct: 966 EKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPG 1025
Query: 584 PYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKVT 617
P G G+ G G DG PG RG +G G KG++ T
Sbjct: 1026 PIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGT 1059
Score = 401 bits (1030), Expect = e-111
Identities = 253/586 (43%), Positives = 293/586 (50%), Gaps = 104/586 (17%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGP---------PGPKGDKGEQGDQGPR-MVFPKINH 172
GPPGK G+RGR G G G PG G PG G+KG +GD G + + P
Sbjct: 443 GPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGED 502
Query: 173 GFLSADQQLIKRRLI--KGDQGQAGPPGPPGPPGP------RGPPGDTGKDGPRGMPGVP 224
G D ++ R L G +G GP GPPG PGP GP G G GP+G PG P
Sbjct: 503 GERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPP 562
Query: 225 GEPGKPGEQGLMGP---LGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQN--------- 272
G+ G PG QGL GP +GP G+KG G PG+PGM G G PG PG G
Sbjct: 563 GQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPS 622
Query: 273 ------GIPGP---------------KGEPGEQGEKGDAGENGPKGDTGEKGDPGS---- 307
G PGP KGE GE G G G+ G KGD GE G PGS
Sbjct: 623 GPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEVGVPGSRGED 682
Query: 308 ------SAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGE------PGFIGPQGEPGLP 355
G G+PG G G+KG+ G+PGLPG PG +G PGF G GE G
Sbjct: 683 GPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGAR 742
Query: 356 GLPGTKGERGEAGPPG-RGERGEPGAPGPKGKQGESGTRGPKGSKGDR---GEKGDSGAQ 411
GL G G RGE GP G RG+RG GA G G +G SG GP G G+R G +G +G
Sbjct: 743 GLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFP 802
Query: 412 GPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPP---GPQGL---QGPKGE 465
GP+GPPG G G G + TGPPGPP GPQG GP GE
Sbjct: 803 GPKGPPGPPGKDGLPGHPGQRG-------EVGFQGKTGPPGPPGVVGPQGAAGETGPMGE 855
Query: 466 QGSPGIPGMDGEQGL------KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGM 519
+G PG PG GEQGL +G+KGD G PG G+ G GL G PG G+ G G G+
Sbjct: 856 RGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGL 915
Query: 520 PGPQGPSIIGPPGPP------------GPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPK 567
G +GPS GPPGP GP GPPG GP G PG G G G GP GP
Sbjct: 916 KGNEGPS--GPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPT 973
Query: 568 GERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKG 613
G G +G +G PGP GP G+ G+DG+ G G PG +G KG+ GE G
Sbjct: 974 GRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHG 1019
Score = 399 bits (1025), Expect = e-111
Identities = 234/514 (45%), Positives = 266/514 (51%), Gaps = 35/514 (6%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPR-MVFPKINHGFLSADQ 179
P GP G+RG RG G+SG G G GP GP G++G G QGP PK G D
Sbjct: 756 PTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDG 815
Query: 180 QLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPL 239
L +G+ G G GPPGPPG GP G G+ GP G G PG PG PGEQGL G
Sbjct: 816 -LPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTA 874
Query: 240 GPPGQKGSIGAPGIPGMNGQKG---------------EPGLPGAVGQNGIPGPKGEPGEQ 284
G G KG G PG PG +G G PGL G G +G PGP G PGE+
Sbjct: 875 GKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGER 934
Query: 285 GEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPG 344
G G G GP G G +G PG AAG KG PGE G G G G+ G GLPG G PG
Sbjct: 935 GAAGSGGPIGPPGRPGPQGPPG--AAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPG 992
Query: 345 FIGP---QGEPGLPGLPGTKGERGEAGPPGR-GERGEPGAPGPKGKQGESGTRGPKGSKG 400
G +GE G PG GTKG +GE GPPG G G G PG G GE G RGP+G G
Sbjct: 993 VAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFG 1052
Query: 401 DRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQ 460
+G++G G GP GP G +G G + G++ GPPGPPGP+G
Sbjct: 1053 AKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPM----------GPPGPPGPRGPA 1102
Query: 461 GPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMP 520
GP G G G PG G G G KG+ G+ G G +G G+ G G G KGE G G P
Sbjct: 1103 GPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEP 1162
Query: 521 GPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPG 580
GP GP GP G GP G PGP+G G PGP G GP G G G +GE GE G G PG
Sbjct: 1163 GPPGPK--GPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPG 1220
Query: 581 PRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGE 614
P G G PG G+ G G PG G +G G KG+
Sbjct: 1221 PTGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGD 1254
Score = 396 bits (1018), Expect = e-110
Identities = 243/589 (41%), Positives = 289/589 (49%), Gaps = 117/589 (19%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFP-------------- 168
GP GK G G G GPPG PG +GPPG KG++G G QGP + +P
Sbjct: 587 GPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGP-LGYPGPRGVKGVDGIRGL 645
Query: 169 ------KINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPG 222
K GF + +KGD+G+ G PG G GP GP G TG G G PG
Sbjct: 646 KGHKGEKGEDGFPGFKGDIG----VKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 701
Query: 223 VPGEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPG 282
+ GE GK G GL G G G KGS+G PG PG +G+KG GL G G G GP G G
Sbjct: 702 LMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRG 761
Query: 283 EQGEKGDAGENGPKGDTGEKGDPGSSAA-GIKGEPGESGRPGQKGEPGLPG---LPGLPG 338
++G +G G++G KG +G G G G+ G G +G PG KG PG PG LPG PG
Sbjct: 762 QRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPG 821
Query: 339 IKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGS 398
+GE GF G G PG PG+ G +G GE GP GERG PG PGP G+QG GT G +G+
Sbjct: 822 QRGEVGFQGKTGPPGPPGVVGPQGAAGETGP--MGERGHPGPPGPPGEQGLPGTAGKEGT 879
Query: 399 KGDRGEKGDSGAQGP---RGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPG 455
KGD G G G GP RG PG++G G GN GP GPPG
Sbjct: 880 KGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGN-------------EGPSGPPG 926
Query: 456 PQGLQG------------PKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPG 503
P G G P G G G PG GE+G+ G KG +G G G +G +GLPG
Sbjct: 927 PAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPG 986
Query: 504 L---PGANGMKGEKGDSGMPGPQGPS----IIGPPGPPGP-------------------- 536
PG G G+KG+ G PG +G GPPGPPGP
Sbjct: 987 PAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARG 1046
Query: 537 ----------------HGPPGPMGPHGLPGPKGTD------GPMGPHGPAGPKGERGEKG 574
+GPPGP+G GLPGP G GPMGP GP GP+G G G
Sbjct: 1047 PQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNG 1106
Query: 575 A---------MGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGE 614
A +G GP G G PG+ G PG+ G PG +G +G+ GEKGE
Sbjct: 1107 ADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGE 1155
Score = 388 bits (996), Expect = e-107
Identities = 229/545 (42%), Positives = 265/545 (48%), Gaps = 102/545 (18%)
Query: 113 EAPSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINH 172
E PS PAG PG+RG G G GPPG+PGPQGPPG G+KG G++GP
Sbjct: 919 EGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPI-------- 970
Query: 173 GFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGE 232
G G+ G GP G PGP GPPG G+DG +G G PG+ G G
Sbjct: 971 ----------------GPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGN 1014
Query: 233 QGLMGPLGPPGQKGSIGAPGIPGMNGQ------------------KGEPGLPGAVGQNGI 274
+G GP GPPG G +G PG G +G+ +G G PG +G G+
Sbjct: 1015 KGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGL 1074
Query: 275 PGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSA-------AGIKGEPGESGRPGQKGE 327
PGP GE GE G+ G G GP G G G G+ G G PGE G PG+ G
Sbjct: 1075 PGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGS 1134
Query: 328 PGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKGKQ 387
PG+ G PG+ G +GE G G G+PG PG PG KG G+ GP +G G G PG G
Sbjct: 1135 PGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGP--KGNPGPVGFPGDPGPP 1192
Query: 388 GESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTV 447
GE G RG G+KGDRGE G+ G G GP G+ G G L
Sbjct: 1193 GEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGP-------------------LGK 1233
Query: 448 TGPPGPPGPQGLQGPKGEQGSPGI------------------PGMDGEQGLKGSKGDMGD 489
GP G PG +G QG KG +G PG PG DG +GL GS G G
Sbjct: 1234 RGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRGLPGSVGQQGR 1293
Query: 490 PGMTGEKGG---IGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPH 546
PG TG+ G +G PGLPG G G KG+ G PG G +IGPPG G G G GP
Sbjct: 1294 PGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIG--LIGPPGEQGEKGDRGLPGPQ 1351
Query: 547 GLPGPK------GTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP 600
G PG K G GP+GP GP G G G KGA G GP GP G G G P G P
Sbjct: 1352 GSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKGVQGPP---GHP 1408
Query: 601 GPRGE 605
GP GE
Sbjct: 1409 GPPGE 1413
Score = 383 bits (983), Expect = e-106
Identities = 234/539 (43%), Positives = 267/539 (49%), Gaps = 66/539 (12%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ 180
P G G+ G G RG GPPG PG QG PG G +G +GD GP K L
Sbjct: 843 PQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPG 902
Query: 181 LIKRRL--------IKGDQGQAGPPGPPGPPGPRG------PPGDTGKDGPRGMPGVPGE 226
+R L +KG++G +GPPGP G PG RG P G G+ GP+G PG GE
Sbjct: 903 --ERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRPGPQGPPGAAGE 960
Query: 227 PGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGE 286
G PGE+G +GP G G +G +G PG G G GE G G VG G G KG GE G
Sbjct: 961 KGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGNKGEHGP 1020
Query: 287 KGDAGENGPKGDTGEKGDPGSSAA-------GIKGEPGESGRPGQKGEPGLPGLPGLPGI 339
G G GP G G G G A G KG+ G G G G GL GLPG G
Sbjct: 1021 PGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPSGE 1080
Query: 340 KGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGR----------GERGEPGAPGPKGKQGE 389
KGE G +GP G PG PG G G G GP G GE+GEPG G G QGE
Sbjct: 1081 KGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGE 1140
Query: 390 SGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTG 449
G +GP+G +G++GE G G GP GP G GD G GN G
Sbjct: 1141 PGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGP------KGNPGPV----------G 1184
Query: 450 PPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGD---PGMTGEKGGIGLPGLPG 506
PG PGP G GP+G+ G+ G G DGE G GS G G+ PG G++G G PG G
Sbjct: 1185 FPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEG 1244
Query: 507 ANGMKGEKGDSGM---PGPQGPSIIGPPGPPGPHGP------PGPMGPHGLPGPKGTDGP 557
G KG KGD G PG GP +GP GP G GP PG +G G PG G GP
Sbjct: 1245 RQGGKGAKGDPGAIGAPGKTGP--VGPAGPAGKPGPDGLRGLPGSVGQQGRPGATGQAGP 1302
Query: 558 MGPHGPAGPKGERGEKGAMGEPGPRGPYGL---PGKDGEPGLDGFPGPRGEKGDLGEKG 613
GP GP G G RG+ GA GE G G GL PG+ GE G G PGP+G G GE G
Sbjct: 1303 PGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSPGQKGEMG 1361
Score = 378 bits (970), Expect = e-104
Identities = 237/584 (40%), Positives = 282/584 (48%), Gaps = 107/584 (18%)
Query: 121 PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGP---------RMVFPKIN 171
P GP G G G +G GP G PG +GPPG G G G GP R +
Sbjct: 317 PEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGD 376
Query: 172 HGFLSADQQLIKRRLIK-------------GDQGQAGPPGPPGPPGPRGPPGDTGKDGPR 218
G + A Q+ + +++ G G+ GP G PG PG +G GD G GPR
Sbjct: 377 KGPVVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPR 436
Query: 219 GMPGVPGEPGKPGEQGLMGP------LGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQN 272
G G+ G PGK G +G G G PG KG G G+PG+ G+KG G GA
Sbjct: 437 GPQGLTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGA---Q 493
Query: 273 GIPGPKGEPGEQGEKGDAG------ENGPKGDTGEKGDPG-------------SSAAGIK 313
G+PGP GE GE+G+ G+ G E+GP+G G KG PG G
Sbjct: 494 GLPGPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSL 553
Query: 314 GEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKG---ERGEAGPP 370
G GE G PGQ+G PG GLPG G G G GPQG+PGLPG+PG+ G G+ GPP
Sbjct: 554 GPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPP 613
Query: 371 GR-------GERGEPGAPGPKGKQGESGTRGPKGSKGDRGE------KGDSGAQGPRGPP 417
G G +G G PGP+G +G G RG KG KG++GE KGD G +G RG
Sbjct: 614 GTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDGFPGFKGDIGVKGDRGEV 673
Query: 418 GQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGE 477
G G +G G TGP G PGP GL G KG+ G PG+PG G
Sbjct: 674 GVPGSRGEDGPEGPKGR-------------TGPTGDPGPPGLMGEKGKLGVPGLPGYPGR 720
Query: 478 QGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPS----IIGPPGP 533
QG KGS G G PG +GEKG GL G G G +G G G GP+G + G G
Sbjct: 721 QGPKGSLGFPGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGG 780
Query: 534 PGPHGP------PGPMGPHGLPGPKGTDGP------------------MGPHGPAGPKGE 569
GPHGP PGP GP+G PGPKG GP G GP GP G
Sbjct: 781 DGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGV 840
Query: 570 RGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKG 613
G +GA GE GP G G PG G PG G PG G++G G+ G
Sbjct: 841 VGPQGAAGETGPMGERGHPGPPGPPGEQGLPGTAGKEGTKGDPG 884
Score = 335 bits (859), Expect = 8e-92
Identities = 218/587 (37%), Positives = 263/587 (44%), Gaps = 148/587 (25%)
Query: 139 PPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPG 198
PP + GP G KG+KGE P M+ GPPG
Sbjct: 283 PPLEEAAHGPRGLKGEKGEPAVLEPGMLVE--------------------------GPPG 316
Query: 199 PPGP------------PGPRGPPGDTGKDGPRGMPGVPGEPGKPGE-------------- 232
P GP PGP G PG+ G G G+PG G PG PG
Sbjct: 317 PEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGD 376
Query: 233 -----------------------QGLMGPLGPPGQKGSIGAPGIPGMNGQKGE------- 262
+G GP+G G+ G +G PG PG+ G+ G+
Sbjct: 377 KGPVVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPR 436
Query: 263 --------------------------PGLPGAVGQNGIPGPKGEPGEQGEKGDAGEN--- 293
PG PG G G G G PGE+G +GD G
Sbjct: 437 GPQGLTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLP 496
Query: 294 GPKGDTGEKGDPGS-SAAGIKGEPGESGRPGQKGEPGLPGLPGLPGI---KGEPGFIGPQ 349
GP G+ GE+GD G G+ GE G G G KG PG+PG PG+ G+ +G G +GPQ
Sbjct: 497 GPPGEDGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQ 556
Query: 350 GEPGLPGLPGTKGERGEAGPPG-------RGERGEPGAPGPKGKQGESGTRGPKGSKGDR 402
GEPG PG GT G +G GP G +G +G+PG PG G G G G +G G +
Sbjct: 557 GEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTK 616
Query: 403 GEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGP 462
G +G SG QGP G PG +G +G I G+ E + G PG G G++G
Sbjct: 617 GNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGE-------DGFPGFKGDIGVKGD 669
Query: 463 KGEQGSPGIPGMDGEQGLKGSKGDMGD---PGMTGEKGGIGLPGLPGANGMKGEKGDSGM 519
+GE G PG G DG +G KG G GD PG+ GEKG +G+PGLPG G +G KG G
Sbjct: 670 RGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGF 729
Query: 520 PGPQGPS-------------IIGPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGP 566
PG G S G GP GP G GP G G G KGT G GPHGP G
Sbjct: 730 PGFPGASGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGE 789
Query: 567 KGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKG 613
+G G +G G PGP+GP G PGKDG P G PG RGE G G+ G
Sbjct: 790 RGLPGPQGPNGFPGPKGPPGPPGKDGLP---GHPGQRGEVGFQGKTG 833
Score = 333 bits (855), Expect = 2e-91
Identities = 214/485 (44%), Positives = 243/485 (50%), Gaps = 63/485 (12%)
Query: 123 GPPGKRGKRGRRGESGPPGQPGPQGP---PGPKGDKGEQGDQGPRMVF----PKINHGFL 175
G PG++G +G +GE GPPG PGP GP PG G GE G +GP+ F + GF
Sbjct: 1004 GDPGQKGTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFN 1063
Query: 176 SADQQLIKRRLI-----KGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMP------GVP 224
+ + L KG+ G GP GPPGPPGPRGP G G DGP+G P G P
Sbjct: 1064 GPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPP 1123
Query: 225 GEPGKPGEQGLMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQ 284
GE G+PGE G G G PG KG G G G +GQ GEPG PG G G GPKG PG
Sbjct: 1124 GEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPV 1183
Query: 285 GEKGD---AGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKG 341
G GD GE GP+G G KGD G GEPG+ G PG GE G PG G G G
Sbjct: 1184 GFPGDPGPPGEGGPRGQDGAKGDRGED-----GEPGQPGSPGPTGENGPPGPLGKRGPAG 1238
Query: 342 EPGFIGPQGEPGLPGLPGTKGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGD 401
PG G QG G G PG G G+ GP G G G PGP G +G G+ G +G G
Sbjct: 1239 SPGSEGRQGGKGAKGDPGAIGAPGKTGPV--GPAGPAGKPGPDGLRGLPGSVGQQGRPGA 1296
Query: 402 RGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQG 461
G+ G G GP G PG +GD GA G G PG GL G
Sbjct: 1297 TGQAGPPGPVGPPGLPGLRGDAGA----------------------KGEKGHPGLIGLIG 1334
Query: 462 PKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPG 521
P GEQG G G+ G QG G KG+MG PG +G G G PGLPG G KG KG +G G
Sbjct: 1335 PPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGG 1394
Query: 522 PQGPSIIGPPGPPGPHGPPGP-MGPHGLPGPKGT----DGP-MGPHGPAGPKGERGEKGA 575
P+G G GPPG GPPG + P + PK T DG + A P G GA
Sbjct: 1395 PKGEK--GVQGPPGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLMQEDEAIPTG-----GA 1447
Query: 576 MGEPG 580
G PG
Sbjct: 1448 PGSPG 1452
Score = 233 bits (593), Expect = 5e-61
Identities = 142/364 (39%), Positives = 176/364 (48%), Gaps = 63/364 (17%)
Query: 293 NGPKGDTGEKGDPGSSAAG--IKGEPGESGRPGQKGEPGLPGLPGL---PGIKGEPGFIG 347
+GP+G GEKG+P G ++G PG G G G PG+ G PG PG +G PG G
Sbjct: 290 HGPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLIGPPGIQGNPGPVGDPGERGPPGRAG 349
Query: 348 PQGEPGLPGLPGTK--------GERGEAGPPGRGERGEP------------GAPGPKGKQ 387
G G PG PGT G+ GP + + G PGP G
Sbjct: 350 LPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYT 409
Query: 388 GESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTV 447
G G G GS G +GE GD G QGPRGP G +
Sbjct: 410 GRPGPLGQPGSPGLKGESGDLGPQGPRGPQG----------------------------L 441
Query: 448 TGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGA 507
TGPPG G +G G G +G PG PG+ G++G G G G+ G G+ G GLPG PG
Sbjct: 442 TGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGE 501
Query: 508 NGMKGEKGD---SGMPGPQGP-SIIGPPGPPGPHGPP------GPMGPHGLPGPKGTDGP 557
+G +G+ G+ G+PG GP ++GP GPPG GPP GP GP G GP+G GP
Sbjct: 502 DGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGP 561
Query: 558 MGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKVT 617
G G G +G G +GA+G G +GP G PG G PG DG PG G++G G KG +
Sbjct: 562 PGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGP 621
Query: 618 SPSQ 621
S Q
Sbjct: 622 SGPQ 625
Score = 188 bits (478), Expect = 1e-47
Identities = 124/310 (40%), Positives = 150/310 (48%), Gaps = 34/310 (10%)
Query: 317 GESGRPGQKGEPGL--PGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEAGPPGRGE 374
G G G+KGEP + PG+ ++G PG P+G GL G PG +G G G P
Sbjct: 291 GPRGLKGEKGEPAVLEPGML----VEGPPG---PEGPAGLIGPPGIQGNPGPVGDP---- 339
Query: 375 RGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQKGDQGATEIIDYNGN 434
GE G PG G G G GP G+ + SG G KG A +
Sbjct: 340 -GERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGG-------GDKGPVVAAQEAQAQAI 391
Query: 435 LHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGLKGSKGDMGDPGMTG 494
L +A L + GPPGP G G GP G+ PG PG+ GE G G +G G G+TG
Sbjct: 392 LQQA-----RLALRGPPGPMGYTGRPGPLGQ---PGSPGLKGESGDLGPQGPRGPQGLTG 443
Query: 495 EKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGT 554
G G G GA+G +G GD G+ G +G G PG PG G G G GLPGP G
Sbjct: 444 PPGKAGRRGRAGADGARGMPGDPGVKGDRG--FDGLPGLPGEKGHRGDTGAQGLPGPPGE 501
Query: 555 DGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGE 614
DG G G GP+G GE G G GP+GP G+PG PG+ G GP+G KG LG +GE
Sbjct: 502 DGERGDDGEIGPRGLPGESGPRGLLGPKGPPGIPGP---PGVRGMDGPQGPKGSLGPQGE 558
Query: 615 KVTSPSQHVP 624
Q P
Sbjct: 559 PGPPGQQGTP 568
Score = 152 bits (383), Expect = 1e-36
Identities = 98/249 (39%), Positives = 114/249 (45%), Gaps = 45/249 (18%)
Query: 121 PAGPPGKRGKRGRRGESGPPG------QPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGF 174
PAG PG G++G +G G PG + GP GP GP G G G +G
Sbjct: 1236 PAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLRG------------ 1283
Query: 175 LSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQG 234
+ G GQ G PG G GP GP G G G RG G GE G PG G
Sbjct: 1284 ------------LPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIG 1331
Query: 235 LMGPLGPPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENG 294
L+GP G G+KG G PG G GQKGE G+PGA G G GP G PG G KG G G
Sbjct: 1332 LIGPPGEQGEKGDRGLPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATG 1391
Query: 295 PKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLP-----GLPG--IKGEPGFIG 347
P G GEK G++G PG G PG+ +P +P + G + E I
Sbjct: 1392 PGGPKGEK--------GVQGPPGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLMQEDEAIP 1443
Query: 348 PQGEPGLPG 356
G PG PG
Sbjct: 1444 TGGAPGSPG 1452
Score = 143 bits (361), Expect = 4e-34
Identities = 102/288 (35%), Positives = 128/288 (44%), Gaps = 59/288 (20%)
Query: 359 GTKGERGEAGPPGRGERGEPGAPG----PKGKQGESGTRGPKGSKGDRGEKG-----DSG 409
G + ER + P R +R P P+ ++ +S P G + + E +
Sbjct: 230 GGQRERPQNQQPHRAQRSPQQQPSRLHRPQNQEPQSQDPTP-GEEEEILESSLLPPLEEA 288
Query: 410 AQGPRGPPGQKGDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSP 469
A GPRG G+KG+ E + V GPPGP GP GL GP G QG+P
Sbjct: 289 AHGPRGLKGEKGEPAVLE---------------PGMLVEGPPGPEGPAGLIGPPGIQGNP 333
Query: 470 GIPGMDGEQGLKGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSII- 528
G G GE+G PG G G G PG PG + M + SG G +GP +
Sbjct: 334 GPVGDPGERG---------PPGRAGLPGSDGAPGPPGTSLMLPFRFGSG-GGDKGPVVAA 383
Query: 529 -----------------GPPGPPGPHGPPGPMGPHGLPGPKGTDGPMGPHGPAGPK---- 567
GPPGP G G PGP+G G PG KG G +GP GP GP+
Sbjct: 384 QEAQAQAILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTG 443
Query: 568 --GERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKG 613
G+ G +G G G RG G PG G+ G DG PG GEKG G+ G
Sbjct: 444 PPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTG 491
Score = 111 bits (278), Expect = 2e-24
Identities = 81/239 (33%), Positives = 96/239 (40%), Gaps = 43/239 (17%)
Query: 115 PSECNCPAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGF 174
P+ N P GP GKRG G G G G G +G PG G G+ G GP K
Sbjct: 1221 PTGENGPPGPLGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDG 1280
Query: 175 LSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRG---------------------PPGDTG 213
L + ++ G GQAGPPGP GPPG G PPG+ G
Sbjct: 1281 LRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQG 1340
Query: 214 KDGPRGMPGVPGEPGKPGEQG---------------LMGPLGPPGQKGSIGAPGIPGMNG 258
+ G RG+PG G PG+ GE G L GP GP G KG+ G G G G
Sbjct: 1341 EKGDRGLPGPQGSPGQKGEMGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPGGPKGEKG 1400
Query: 259 QKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPG 317
+G PG PG G+ P P P + D G + D G G PG
Sbjct: 1401 VQGPPGHPGPPGEVIQPLPIQMPKKTRRSVD-------GSRLMQEDEAIPTGGAPGSPG 1452
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.142 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,811,994
Number of Sequences: 37866
Number of extensions: 3984841
Number of successful extensions: 196314
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 1346
Number of HSP's that attempted gapping in prelim test: 14495
Number of HSP's gapped (non-prelim): 19323
length of query: 642
length of database: 18,247,518
effective HSP length: 109
effective length of query: 533
effective length of database: 14,120,124
effective search space: 7526026092
effective search space used: 7526026092
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.