Guide to the Human Genome
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Name: REPS2 Sequence: fasta or formatted (659aa) NCBI GI: 125625322
Description:

RALBP1 associated Eps domain containing 2 isoform 2

Referenced in:

Additional Interaction Domain Families

Other entries for this name:
alt prot [660aa] RALBP1 associated Eps domain containing 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         75          15
 C cysteine            1.4          9           1
 D aspartate           3.8         25           2
 E glutamate           7.3         48           2
 F phenylalanine       2.7         18           2
 G glycine             5.0         33           3
 H histidine           1.5         10           1
 I isoleucine          2.9         19           1
 K lysine              5.9         39           2
 L leucine             8.6         57           3
 M methionine          1.5         10           2
 N asparagine          2.9         19           1
 P proline            11.7         77           4
 Q glutamine           6.7         44           3
 R arginine            5.3         35           2
 S serine             10.5         69           3
 T threonine           4.4         29           2
 V valine              3.6         24           1
 W tryptophan          0.5          3           1
 Y tyrosine            2.4         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RALBP1 associated Eps domain containing 2 isoform 2... 
REPS2                 0.996   RALBP1 associated Eps domain containing 2 isoform 1...
REPS1                 0.274   RALBP1 associated Eps domain containing 1 isoform b...
REPS1                 0.261   RALBP1 associated Eps domain containing 1 isoform a...
ITSN2                 0.051   intersectin 2 isoform 3 
ITSN2                 0.051   intersectin 2 isoform 1 
ITSN2                 0.051   intersectin 2 isoform 2 
ITSN1                 0.043   intersectin 1 isoform ITSN-s 
ITSN1                 0.043   intersectin 1 isoform ITSN-l 
EHD4                  0.032   EH-domain containing 4 
EPS15                 0.032   epidermal growth factor receptor pathway substrate 15...
EPS15L1               0.030   epidermal growth factor receptor pathway substrate 1...
EHD2                  0.028   EH-domain containing 2 
EHD1                  0.025   EH-domain containing 1 
C2orf55               0.025   hypothetical protein LOC343990 
AFF1                  0.023   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
EHD3                  0.022   EH-domain containing 3 
HOXA13                0.020   homeobox A13 
MUC7                  0.019   mucin 7, secreted precursor 
MUC7                  0.019   mucin 7, secreted precursor 
MUC7                  0.019   mucin 7, secreted precursor 
PRG4                  0.019   proteoglycan 4 isoform D 
PRG4                  0.019   proteoglycan 4 isoform C 
PRG4                  0.019   proteoglycan 4 isoform B 
PRG4                  0.019   proteoglycan 4 isoform A 
SRRM1                 0.019   serine/arginine repetitive matrix 1 
FLJ22184              0.019   PREDICTED: hypothetical protein LOC80164 
PANX2                 0.018   pannexin 2 isoform 1 
SYNPO                 0.018   synaptopodin isoform A 
FLJ22184              0.018   PREDICTED: hypothetical protein FLJ22184 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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