Guide to the Human Genome
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Name: REPS1 Sequence: fasta or formatted (795aa) NCBI GI: 190886435
Description:

RALBP1 associated Eps domain containing 1 isoform a

Referenced in:

Additional Interaction Domain Families

Other entries for this name:
alt prot [769aa] RALBP1 associated Eps domain containing 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         61           2
 C cysteine            0.4          3           1
 D aspartate           5.8         46           2
 E glutamate           6.5         52           2
 F phenylalanine       3.3         26           2
 G glycine             4.9         39           2
 H histidine           2.5         20           1
 I isoleucine          3.1         25           1
 K lysine              4.8         38           2
 L leucine             7.0         56           2
 M methionine          1.1          9           1
 N asparagine          3.4         27           1
 P proline            10.6         84           6
 Q glutamine           6.2         49           3
 R arginine            4.8         38           3
 S serine             12.3         98           4
 T threonine           6.4         51           2
 V valine              6.5         52           3
 W tryptophan          1.0          8           1
 Y tyrosine            1.6         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RALBP1 associated Eps domain containing 1 isoform a... 
REPS1                 0.954   RALBP1 associated Eps domain containing 1 isoform b...
REPS2                 0.207   RALBP1 associated Eps domain containing 2 isoform 2...
REPS2                 0.204   RALBP1 associated Eps domain containing 2 isoform 1...
ITSN1                 0.030   intersectin 1 isoform ITSN-s 
ITSN1                 0.030   intersectin 1 isoform ITSN-l 
EHD3                  0.029   EH-domain containing 3 
EHD1                  0.029   EH-domain containing 1 
EPS15                 0.029   epidermal growth factor receptor pathway substrate 15...
EPS15L1               0.029   epidermal growth factor receptor pathway substrate 1...
EHD2                  0.028   EH-domain containing 2 
ITSN2                 0.027   intersectin 2 isoform 3 
ITSN2                 0.027   intersectin 2 isoform 1 
ITSN2                 0.027   intersectin 2 isoform 2 
EHD4                  0.027   EH-domain containing 4 
MLL3                  0.018   myeloid/lymphoid or mixed-lineage leukemia 3 
ABI3BP                0.016   ABI gene family, member 3 (NESH) binding protein [Ho...
KIAA1429              0.016   hypothetical protein LOC25962 isoform 1 
KIAA1429              0.016   hypothetical protein LOC25962 isoform 2 
SOS1                  0.015   son of sevenless homolog 1 
AKT1S1                0.015   AKT1 substrate 1 (proline-rich) 
AKT1S1                0.015   AKT1 substrate 1 (proline-rich) 
AKT1S1                0.015   AKT1 substrate 1 (proline-rich) 
MYO16                 0.015   myosin heavy chain Myr 8 
PPP1R9B               0.015   protein phosphatase 1, regulatory subunit 9B 
POLR2A                0.014   DNA-directed RNA polymerase II A 
KIAA0182              0.014   genetic suppressor element 1 isoform 2 
KIAA0182              0.014   genetic suppressor element 1 isoform 1 
LOC100133756          0.013   PREDICTED: hypothetical protein, partial 
MAP7D1                0.013   MAP7 domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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