AFF1 31986

Name: AFF1	Sequence: fasta or formatted (1210aa)		NCBI GI: 5174573
Description: myeloid/lymphoid or mixed-lineage leukemia trithorax homolog 2		Referenced in: Additional Genes in Development PHD Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 81 3 C cysteine 1.2 14 1 D aspartate 4.7 57 2 E glutamate 6.8 82 2 F phenylalanine 1.9 23 2 G glycine 4.2 51 1 H histidine 3.0 36 2 I isoleucine 2.3 28 1 K lysine 9.3 112 3 L leucine 6.4 78 2 M methionine 1.7 20 1 N asparagine 2.5 30 2 P proline 11.2 136 4 Q glutamine 5.8 70 2 R arginine 4.7 57 2 S serine 16.3 197 7 T threonine 5.8 70 2 V valine 4.0 48 3 W tryptophan 0.3 4 1 Y tyrosine 1.3 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 myeloid/lymphoid or mixed-lineage leukemia trithorax ... AFF4 0.281 ALL1 fused gene from 5q31 AFF3 0.217 AF4/FMR2 family, member 3 isoform 2 AFF3 0.216 AF4/FMR2 family, member 3 isoform 1 AFF2 0.128 fragile X mental retardation 2 NEFH 0.033 neurofilament, heavy polypeptide 200kDa NOLC1 0.031 nucleolar and coiled-body phosphoprotein 1 SRRM1 0.030 serine/arginine repetitive matrix 1 PCLO 0.029 piccolo isoform 2 PCLO 0.029 piccolo isoform 1 PRG4 0.028 proteoglycan 4 isoform D PRG4 0.028 proteoglycan 4 isoform C SRRM2 0.027 splicing coactivator subunit SRm300 PRG4 0.027 proteoglycan 4 isoform B PRG4 0.027 proteoglycan 4 isoform A DSPP 0.023 dentin sialophosphoprotein preproprotein SCAF1 0.022 SR-related CTD-associated factor 1 RERE 0.022 atrophin-1 like protein isoform b RERE 0.022 atrophin-1 like protein isoform a RERE 0.022 atrophin-1 like protein isoform a LOC100294236 0.021 PREDICTED: similar to diffuse panbronchiolitis crit... LOC100170229 0.021 hypothetical protein LOC100170229 MAPT 0.021 microtubule-associated protein tau isoform 1 TNRC18 0.021 trinucleotide repeat containing 18 C2orf55 0.021 hypothetical protein LOC343990 MAST4 0.020 microtubule associated serine/threonine kinase fami... MAPT 0.020 microtubule-associated protein tau isoform 6 KIAA1522 0.020 hypothetical protein LOC57648 ATN1 0.020 atrophin-1 ATN1 0.020 atrophin-1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.