Guide to the Human Genome
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Name: ITSN2 Sequence: fasta or formatted (1697aa) NCBI GI: 194294521
Description:

intersectin 2 isoform 1

Referenced in:

Additional Interaction Domain Families
Rho and Rac
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [1670aa] intersectin 2 isoform 3
alt prot [1249aa] intersectin 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         96           2
 C cysteine            1.1         19           1
 D aspartate           4.0         68           2
 E glutamate           9.3        157           4
 F phenylalanine       3.4         57           2
 G glycine             5.2         89           2
 H histidine           1.4         24           1
 I isoleucine          4.2         71           2
 K lysine              8.8        150           3
 L leucine            11.1        189           3
 M methionine          2.7         45           2
 N asparagine          4.4         75           2
 P proline             5.2         88           2
 Q glutamine           7.2        122           3
 R arginine            4.9         83           2
 S serine              8.3        141           4
 T threonine           5.1         86           2
 V valine              4.1         69           2
 W tryptophan          1.6         28           2
 Y tyrosine            2.4         40           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   intersectin 2 isoform 1 
ITSN2                 0.980   intersectin 2 isoform 3 
ITSN2                 0.725   intersectin 2 isoform 2 
ITSN1                 0.573   intersectin 1 isoform ITSN-l 
ITSN1                 0.336   intersectin 1 isoform ITSN-s 
EPS15L1               0.037   epidermal growth factor receptor pathway substrate 1...
ARHGEF12              0.030   Rho guanine nucleotide exchange factor (GEF) 12 [Homo...
EPS15                 0.030   epidermal growth factor receptor pathway substrate 15...
SH3D19                0.030   SH3 domain containing 19 isoform c 
SH3D19                0.030   SH3 domain containing 19 isoform b 
SH3D19                0.030   SH3 domain containing 19 isoform a 
TCHH                  0.029   trichohyalin 
ARHGEF11              0.028   Rho guanine nucleotide exchange factor (GEF) 11 isof...
ARHGEF11              0.028   Rho guanine nucleotide exchange factor (GEF) 11 isofo...
ARHGEF1               0.026   Rho guanine nucleotide exchange factor 1 isoform 1 [...
ARHGEF1               0.026   Rho guanine nucleotide exchange factor 1 isoform 3 [...
ARHGEF1               0.026   Rho guanine nucleotide exchange factor 1 isoform 2 [...
SGEF                  0.026   Src homology 3 domain-containing guanine nucleotide...
SPATA13               0.025   spermatogenesis associated 13 
ARHGEF16              0.025   Rho guanine exchange factor 16 
ARHGEF3               0.024   Rho guanine nucleotide exchange factor 3 isoform 2 ...
ARHGEF3               0.024   Rho guanine nucleotide exchange factor 3 isoform 1 ...
ARHGEF3               0.024   Rho guanine nucleotide exchange factor 3 isoform 3 [H...
ARHGEF7               0.024   PAK-interacting exchange factor beta isoform a [Hom...
ARHGEF7               0.024   PAK-interacting exchange factor beta isoform d [Hom...
ARHGEF7               0.024   PAK-interacting exchange factor beta isoform c [Hom...
ARHGEF7               0.024   PAK-interacting exchange factor beta isoform b [Homo...
ARHGEF7               0.024   PAK-interacting exchange factor beta isoform a 
NET1                  0.024   neuroepithelial cell transforming gene 1 isoform 1 ...
NET1                  0.024   neuroepithelial cell transforming gene 1 isoform 2 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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