Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ITSN2 Sequence: fasta or formatted (1249aa) NCBI GI: 194294525
Description:

intersectin 2 isoform 2

Referenced in:

Additional Interaction Domain Families
Rho and Rac
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [1697aa] intersectin 2 isoform 1
alt prot [1670aa] intersectin 2 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         73           2
 C cysteine            0.9         11           2
 D aspartate           3.8         47           2
 E glutamate           9.7        121           4
 F phenylalanine       2.6         33           2
 G glycine             5.6         70           2
 H histidine           1.1         14           1
 I isoleucine          3.9         49           2
 K lysine              8.7        109           3
 L leucine            11.0        137           3
 M methionine          2.6         32           2
 N asparagine          4.5         56           2
 P proline             5.6         70           2
 Q glutamine           7.8         97           3
 R arginine            4.9         61           2
 S serine              8.8        110           4
 T threonine           4.6         58           2
 V valine              3.9         49           2
 W tryptophan          1.8         23           2
 Y tyrosine            2.3         29           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   intersectin 2 isoform 2 
ITSN2                 0.989   intersectin 2 isoform 1 
ITSN2                 0.961   intersectin 2 isoform 3 
ITSN1                 0.483   intersectin 1 isoform ITSN-l 
ITSN1                 0.458   intersectin 1 isoform ITSN-s 
EPS15L1               0.051   epidermal growth factor receptor pathway substrate 1...
EPS15                 0.041   epidermal growth factor receptor pathway substrate 15...
SH3D19                0.041   SH3 domain containing 19 isoform c 
SH3D19                0.041   SH3 domain containing 19 isoform b 
SH3D19                0.041   SH3 domain containing 19 isoform a 
TCHH                  0.039   trichohyalin 
CALD1                 0.032   caldesmon 1 isoform 1 
LOC283685             0.032   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC727832             0.031   golgi autoantigen, golgin subfamily a-like 
NCK1                  0.030   NCK adaptor protein 1 
LOC283685             0.029   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC283767             0.028   golgi autoantigen, golgin subfamily a-like 
REPS2                 0.027   RALBP1 associated Eps domain containing 2 isoform 1...
REPS2                 0.027   RALBP1 associated Eps domain containing 2 isoform 2...
RBM25                 0.027   RNA binding motif protein 25 
EEA1                  0.026   early endosome antigen 1, 162kD 
LOC645202             0.026   PREDICTED: hypothetical protein LOC645202 
LOC440243             0.026   PREDICTED: Putative golgin subfamily A member 6-lik...
CENPE                 0.026   centromere protein E 
CD2AP                 0.025   CD2-associated protein 
ANKRD26               0.024   ankyrin repeat domain 26 
EIF3A                 0.024   eukaryotic translation initiation factor 3, subunit 1...
GIGYF2                0.024   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.024   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.024   GRB10 interacting GYF protein 2 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press