Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: EPS15L1 Sequence: fasta or formatted (864aa) NCBI GI: 10864047
Description:

epidermal growth factor receptor pathway substrate 15-like 1

Referenced in:

Epidermal Growth Factor
Additional Membrane Functions
Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         57           2
 C cysteine            0.2          2           1
 D aspartate           8.7         75           2
 E glutamate           5.8         50           2
 F phenylalanine       5.6         48           2
 G glycine             6.5         56           2
 H histidine           1.5         13           1
 I isoleucine          2.8         24           2
 K lysine              7.5         65           2
 L leucine             9.4         81           2
 M methionine          1.6         14           1
 N asparagine          2.3         20           2
 P proline             9.3         80           3
 Q glutamine           6.6         57           2
 R arginine            3.1         27           1
 S serine             12.0        104           4
 T threonine           4.4         38           2
 V valine              4.4         38           2
 W tryptophan          0.6          5           1
 Y tyrosine            1.2         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   epidermal growth factor receptor pathway substrate 1... 
EPS15                 0.402   epidermal growth factor receptor pathway substrate 15...
EPS15                 0.149   epidermal growth factor receptor pathway substrate ...
ITSN1                 0.089   intersectin 1 isoform ITSN-s 
ITSN1                 0.089   intersectin 1 isoform ITSN-l 
ITSN2                 0.075   intersectin 2 isoform 3 
ITSN2                 0.075   intersectin 2 isoform 1 
ITSN2                 0.075   intersectin 2 isoform 2 
EHD2                  0.046   EH-domain containing 2 
EHD3                  0.043   EH-domain containing 3 
EHD1                  0.043   EH-domain containing 1 
EHD4                  0.042   EH-domain containing 4 
REPS1                 0.028   RALBP1 associated Eps domain containing 1 isoform b...
REPS1                 0.026   RALBP1 associated Eps domain containing 1 isoform a...
MYH4                  0.026   myosin, heavy polypeptide 4, skeletal muscle 
MYH10                 0.026   myosin, heavy polypeptide 10, non-muscle 
MYH3                  0.026   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH8                  0.026   myosin, heavy chain 8, skeletal muscle, perinatal [...
C10orf118             0.025   CTCL tumor antigen L14-2 
MYH9                  0.025   myosin, heavy polypeptide 9, non-muscle 
MYH2                  0.025   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.025   myosin, heavy chain 2, skeletal muscle, adult [Homo...
CLIP1                 0.025   restin isoform b 
CLIP1                 0.025   restin isoform a 
MYH14                 0.024   myosin, heavy chain 14 isoform 1 
MYH14                 0.024   myosin, heavy chain 14 isoform 2 
MYH14                 0.024   myosin, heavy chain 14 isoform 3 
MYH1                  0.024   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH6                  0.024   myosin heavy chain 6 
CEP110                0.024   centrosomal protein 110kDa 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press