Guide to the Human Genome
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Name: EHD2 Sequence: fasta or formatted (543aa) NCBI GI: 21361462
Description:

EH-domain containing 2

Referenced in:

Additional Membrane Functions
Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         38           2
 C cysteine            0.6          3           1
 D aspartate           6.4         35           2
 E glutamate           8.1         44           2
 F phenylalanine       4.8         26           1
 G glycine             7.6         41           2
 H histidine           2.9         16           2
 I isoleucine          4.2         23           2
 K lysine              7.0         38           3
 L leucine            12.0         65           2
 M methionine          2.9         16           1
 N asparagine          2.2         12           1
 P proline             5.9         32           2
 Q glutamine           3.5         19           2
 R arginine            5.9         32           2
 S serine              5.2         28           1
 T threonine           3.7         20           2
 V valine              6.8         37           2
 W tryptophan          1.3          7           1
 Y tyrosine            2.0         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   EH-domain containing 2 
EHD1                  0.707   EH-domain containing 1 
EHD3                  0.705   EH-domain containing 3 
EHD4                  0.674   EH-domain containing 4 
SRL                   0.176   sarcalumenin 
EPS15                 0.074   epidermal growth factor receptor pathway substrate 15...
EPS15L1               0.073   epidermal growth factor receptor pathway substrate 1...
ITSN1                 0.050   intersectin 1 isoform ITSN-s 
ITSN1                 0.050   intersectin 1 isoform ITSN-l 
ITSN2                 0.049   intersectin 2 isoform 3 
ITSN2                 0.049   intersectin 2 isoform 1 
ITSN2                 0.049   intersectin 2 isoform 2 
REPS1                 0.041   RALBP1 associated Eps domain containing 1 isoform a...
REPS1                 0.041   RALBP1 associated Eps domain containing 1 isoform b...
REPS2                 0.034   RALBP1 associated Eps domain containing 2 isoform 1...
REPS2                 0.034   RALBP1 associated Eps domain containing 2 isoform 2...
DRG2                  0.010   developmentally regulated GTP binding protein 2 [Homo...
NEFM                  0.007   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.007   neurofilament, medium polypeptide 150kDa isoform 2 ...
C11orf51              0.007   hypothetical protein LOC25906 
NOL9                  0.006   nucleolar protein 9 
C21orf58              0.006   hypothetical protein LOC54058 
C10orf79              0.005   hypothetical protein LOC80217 
CCDC63                0.005   coiled-coil domain containing 63 
RANBP6                0.005   RAN binding protein 6 
DRG1                  0.005   developmentally regulated GTP binding protein 1 [Homo...
EFHA1                 0.005   EF-hand domain family, member A1 
DNHD1                 0.004   dynein heavy chain domain 1 isoform 1 
CKAP2                 0.004   cytoskeleton associated protein 2 isoform 2 
CKAP2                 0.004   cytoskeleton associated protein 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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