Guide to the Human Genome
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Name: EHD4 Sequence: fasta or formatted (541aa) NCBI GI: 21264315
Description:

EH-domain containing 4

Referenced in:

Additional Membrane Functions
Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         36           2
 C cysteine            0.7          4           1
 D aspartate           6.1         33           2
 E glutamate           7.4         40           3
 F phenylalanine       5.0         27           1
 G glycine             6.8         37           2
 H histidine           1.5          8           1
 I isoleucine          5.7         31           2
 K lysine              7.6         41           2
 L leucine            10.4         56           2
 M methionine          2.6         14           1
 N asparagine          3.5         19           1
 P proline             5.5         30           2
 Q glutamine           5.0         27           2
 R arginine            5.4         29           2
 S serine              6.5         35           2
 T threonine           3.7         20           2
 V valine              5.7         31           2
 W tryptophan          1.1          6           1
 Y tyrosine            3.1         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   EH-domain containing 4 
EHD1                  0.758   EH-domain containing 1 
EHD3                  0.755   EH-domain containing 3 
EHD2                  0.681   EH-domain containing 2 
SRL                   0.175   sarcalumenin 
EPS15                 0.071   epidermal growth factor receptor pathway substrate 15...
EPS15L1               0.067   epidermal growth factor receptor pathway substrate 1...
ITSN1                 0.056   intersectin 1 isoform ITSN-s 
ITSN1                 0.056   intersectin 1 isoform ITSN-l 
ITSN2                 0.046   intersectin 2 isoform 3 
ITSN2                 0.046   intersectin 2 isoform 1 
ITSN2                 0.046   intersectin 2 isoform 2 
REPS2                 0.040   RALBP1 associated Eps domain containing 2 isoform 2...
REPS2                 0.040   RALBP1 associated Eps domain containing 2 isoform 1...
REPS1                 0.040   RALBP1 associated Eps domain containing 1 isoform a...
REPS1                 0.040   RALBP1 associated Eps domain containing 1 isoform b...
APOB                  0.010   apolipoprotein B precursor 
POTEB                 0.008   protein expressed in prostate, ovary, testis, and pl...
NOL9                  0.008   nucleolar protein 9 
TP53BP2               0.006   tumor protein p53 binding protein, 2 isoform 1 [Hom...
TP53BP2               0.006   tumor protein p53 binding protein, 2 isoform 2 
PPP1R9B               0.006   protein phosphatase 1, regulatory subunit 9B 
AP1GBP1               0.005   AP1 gamma subunit binding protein 1 isoform 2 
AP1GBP1               0.005   AP1 gamma subunit binding protein 1 isoform 1 
ANK2                  0.005   ankyrin 2 isoform 1 
NXF1                  0.005   nuclear RNA export factor 1 isoform 1 
CLP1                  0.005   ATP/GTP-binding protein isoform 1 
KTN1                  0.005   kinectin 1 isoform a 
KTN1                  0.005   kinectin 1 isoform c 
KTN1                  0.005   kinectin 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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