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Search of human proteins with 38372917
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38372917 C1q and tumor necrosis factor related protein 1
isoform 1 [Homo sapiens]
(281 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38372917 C1q and tumor necrosis factor related protein 1 isof... 587 e-168
gi|13569944 C1q and tumor necrosis factor related protein 1 isof... 587 e-168
gi|38372913 C1q and tumor necrosis factor related protein 1 [Hom... 416 e-117
gi|32967300 C1q and tumor necrosis factor related protein 6 [Hom... 234 6e-62
gi|32967294 C1q and tumor necrosis factor related protein 6 [Hom... 234 6e-62
gi|116686136 C1q and tumor necrosis factor related protein 8 [Ho... 233 1e-61
gi|4757760 adiponectin precursor [Homo sapiens] 106 2e-23
gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 89 6e-18
gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 89 6e-18
gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 89 6e-18
gi|7705753 complement component 1, q subcomponent, A chain precu... 87 2e-17
gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom... 86 5e-17
gi|58801559 complement component 1, q subcomponent-like 3 [Homo ... 86 5e-17
gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho... 85 6e-17
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom... 85 6e-17
gi|14149712 C1q and tumor necrosis factor related protein 5 prec... 85 8e-17
gi|122937273 hypothetical protein LOC131149 [Homo sapiens] 82 7e-16
gi|13569919 C1q and tumor necrosis factor related protein 3 isof... 79 4e-15
gi|148233912 C1q and tumor necrosis factor related protein 4 [Ho... 78 8e-15
gi|62739183 C1q and tumor necrosis factor related protein 3 isof... 77 1e-14
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s... 75 5e-14
gi|154937344 complement component 1, q subcomponent-like 2 [Homo... 74 1e-13
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 72 7e-13
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 72 7e-13
gi|87298828 complement component 1, q subcomponent, B chain prec... 71 9e-13
gi|56786155 complement component 1, q subcomponent, C chain prec... 66 3e-11
gi|166235903 complement component 1, q subcomponent, C chain pre... 66 3e-11
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 64 1e-10
gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens] 62 4e-10
gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens] 62 4e-10
>gi|38372917 C1q and tumor necrosis factor related protein 1 isoform
1 [Homo sapiens]
Length = 281
Score = 587 bits (1514), Expect = e-168
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MGSRGQGLLLAYCLLLAFASGLVLSRVPHVQGEQQEWEGTEELPSPPDHAERAEEQHEKY 60
MGSRGQGLLLAYCLLLAFASGLVLSRVPHVQGEQQEWEGTEELPSPPDHAERAEEQHEKY
Sbjct: 1 MGSRGQGLLLAYCLLLAFASGLVLSRVPHVQGEQQEWEGTEELPSPPDHAERAEEQHEKY 60
Query: 61 RPSQDQGLPASRCLRCCDPGTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAG 120
RPSQDQGLPASRCLRCCDPGTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAG
Sbjct: 61 RPSQDQGLPASRCLRCCDPGTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAG 120
Query: 121 ARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNM 180
ARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNM
Sbjct: 121 ARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNM 180
Query: 181 FTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLEL 240
FTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLEL
Sbjct: 181 FTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLEL 240
Query: 241 REQDQVWVRLYKGERENAIFSEELDTYITFSGYLVKHATEP 281
REQDQVWVRLYKGERENAIFSEELDTYITFSGYLVKHATEP
Sbjct: 241 REQDQVWVRLYKGERENAIFSEELDTYITFSGYLVKHATEP 281
>gi|13569944 C1q and tumor necrosis factor related protein 1 isoform
1 [Homo sapiens]
Length = 281
Score = 587 bits (1514), Expect = e-168
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MGSRGQGLLLAYCLLLAFASGLVLSRVPHVQGEQQEWEGTEELPSPPDHAERAEEQHEKY 60
MGSRGQGLLLAYCLLLAFASGLVLSRVPHVQGEQQEWEGTEELPSPPDHAERAEEQHEKY
Sbjct: 1 MGSRGQGLLLAYCLLLAFASGLVLSRVPHVQGEQQEWEGTEELPSPPDHAERAEEQHEKY 60
Query: 61 RPSQDQGLPASRCLRCCDPGTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAG 120
RPSQDQGLPASRCLRCCDPGTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAG
Sbjct: 61 RPSQDQGLPASRCLRCCDPGTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAG 120
Query: 121 ARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNM 180
ARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNM
Sbjct: 121 ARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNM 180
Query: 181 FTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLEL 240
FTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLEL
Sbjct: 181 FTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLEL 240
Query: 241 REQDQVWVRLYKGERENAIFSEELDTYITFSGYLVKHATEP 281
REQDQVWVRLYKGERENAIFSEELDTYITFSGYLVKHATEP
Sbjct: 241 REQDQVWVRLYKGERENAIFSEELDTYITFSGYLVKHATEP 281
>gi|38372913 C1q and tumor necrosis factor related protein 1 [Homo
sapiens]
Length = 199
Score = 416 bits (1070), Expect = e-117
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 83 MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK 142
MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK
Sbjct: 1 MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK 60
Query: 143 SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 202
SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW
Sbjct: 61 SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 120
Query: 203 NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE 262
NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE
Sbjct: 121 NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE 180
Query: 263 ELDTYITFSGYLVKHATEP 281
ELDTYITFSGYLVKHATEP
Sbjct: 181 ELDTYITFSGYLVKHATEP 199
>gi|32967300 C1q and tumor necrosis factor related protein 6 [Homo
sapiens]
Length = 278
Score = 234 bits (597), Expect = 6e-62
Identities = 119/222 (53%), Positives = 149/222 (67%), Gaps = 15/222 (6%)
Query: 70 ASRCLRCCDPGTSMYPATAV---------------PQINITILKGEKGDRGDRGLQGKYG 114
AS C RCCD + PA P INITILKG+KGD G GL G G
Sbjct: 53 ASGCQRCCDSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMG 112
Query: 115 KTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNL 174
+ G G G G KG KG MG+PG C+ + AFSVGRK +HS +QT++F+ FVNL
Sbjct: 113 REGPQGEPGPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNL 172
Query: 175 YDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQSQ 234
F+M TG+F + G+YFFSLNVH+WN KETY+HIM N++E VIL+AQ +RSIMQSQ
Sbjct: 173 DGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQ 232
Query: 235 SLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLVK 276
S+ML+L D+VWVRL+K +RENAI+S + DTYITFSG+L+K
Sbjct: 233 SVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIK 274
>gi|32967294 C1q and tumor necrosis factor related protein 6 [Homo
sapiens]
Length = 278
Score = 234 bits (597), Expect = 6e-62
Identities = 119/222 (53%), Positives = 149/222 (67%), Gaps = 15/222 (6%)
Query: 70 ASRCLRCCDPGTSMYPATAV---------------PQINITILKGEKGDRGDRGLQGKYG 114
AS C RCCD + PA P INITILKG+KGD G GL G G
Sbjct: 53 ASGCQRCCDSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMG 112
Query: 115 KTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNL 174
+ G G G G KG KG MG+PG C+ + AFSVGRK +HS +QT++F+ FVNL
Sbjct: 113 REGPQGEPGPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNL 172
Query: 175 YDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQSQ 234
F+M TG+F + G+YFFSLNVH+WN KETY+HIM N++E VIL+AQ +RSIMQSQ
Sbjct: 173 DGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQ 232
Query: 235 SLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLVK 276
S+ML+L D+VWVRL+K +RENAI+S + DTYITFSG+L+K
Sbjct: 233 SVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIK 274
>gi|116686136 C1q and tumor necrosis factor related protein 8 [Homo
sapiens]
Length = 252
Score = 233 bits (595), Expect = 1e-61
Identities = 119/232 (51%), Positives = 148/232 (63%), Gaps = 18/232 (7%)
Query: 67 GLPASRCLRCCDPGTSMYPATAV------------------PQINITILKGEKGDRGDRG 108
GLP C+ CC P P V P I+I ILKGEKG+ G RG
Sbjct: 20 GLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVRG 79
Query: 109 LQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFD 168
G+ GK G GARG G +GQKG +G PG C+ YAAFSVGR++ +HS+ ++Q V FD
Sbjct: 80 RAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFSVGRREGLHSSDHFQAVPFD 139
Query: 169 TEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDR 228
TE VNL F++ G+F C VPG+YF SLNVHTWN KETYLHIM N +L+AQ +R
Sbjct: 140 TELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYLHIMLNRRPAAVLYAQPSER 199
Query: 229 SIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLVKHATE 280
S+MQ+QSLML L D VWVR+++ +R+NAI+ E D YITFSG+LVK A E
Sbjct: 200 SVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYITFSGHLVKPAAE 251
>gi|4757760 adiponectin precursor [Homo sapiens]
Length = 244
Score = 106 bits (265), Expect = 2e-23
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 98 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMH 157
KGEKGD G G +G G+TG GA G G G +G G PGE + +AFSVG + +
Sbjct: 65 KGEKGDPGLIGPKGDIGETGVPGAEGPRGFPGIQGRKGEPGEGAYVYRSAFSVGLETYVT 124
Query: 158 SNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEE 217
+ + F F N +H++ TGKF+C +PGLY+F+ ++ T K+ + + K ++
Sbjct: 125 IPN--MPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHI-TVYMKDVKVSLFKKDKA 181
Query: 218 VVILFAQVGDRSIMQ-SQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLVK 276
++ + Q + ++ Q S S++L L DQVW+++Y N ++++ D TF+G+L+
Sbjct: 182 MLFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYADN-DNDSTFTGFLLY 240
Query: 277 HAT 279
H T
Sbjct: 241 HDT 243
>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
b [Homo sapiens]
Length = 289
Score = 88.6 bits (218), Expect = 6e-18
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE-------RCKSHY--AA 147
L GEKGD+G+ G +G G G G G GP G KG G G+ RC S +A
Sbjct: 90 LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSA 149
Query: 148 FSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKET 207
FSVG +IF+ N +H+N TGKF C PG+Y+FS ++ N+
Sbjct: 150 FSVGITTSYPEERL--PIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLA 207
Query: 208 YLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTY 267
+ + + A G+ + S S ++ L+ +D+VW+ ++ + +N +FS+
Sbjct: 208 IGLVHNGQYRIKTFDANTGNHDV-ASGSTVIYLQPEDEVWLEIFFTD-QNGLFSDPGWAD 265
Query: 268 ITFSGYLV 275
FSG+L+
Sbjct: 266 SLFSGFLL 273
Score = 37.4 bits (85), Expect = 0.015
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKS 143
L G G G G G +G+ G G G G KG+KG G G R K+
Sbjct: 39 LPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKT 85
>gi|206597454 C1q and tumor necrosis factor related protein 7
isoform b [Homo sapiens]
Length = 289
Score = 88.6 bits (218), Expect = 6e-18
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE-------RCKSHY--AA 147
L GEKGD+G+ G +G G G G G GP G KG G G+ RC S +A
Sbjct: 90 LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSA 149
Query: 148 FSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKET 207
FSVG +IF+ N +H+N TGKF C PG+Y+FS ++ N+
Sbjct: 150 FSVGITTSYPEERL--PIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLA 207
Query: 208 YLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTY 267
+ + + A G+ + S S ++ L+ +D+VW+ ++ + +N +FS+
Sbjct: 208 IGLVHNGQYRIKTFDANTGNHDV-ASGSTVIYLQPEDEVWLEIFFTD-QNGLFSDPGWAD 265
Query: 268 ITFSGYLV 275
FSG+L+
Sbjct: 266 SLFSGFLL 273
Score = 37.4 bits (85), Expect = 0.015
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKS 143
L G G G G G +G+ G G G G KG+KG G G R K+
Sbjct: 39 LPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKT 85
>gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
Length = 296
Score = 88.6 bits (218), Expect = 6e-18
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE-------RCKSHY--AA 147
L GEKGD+G+ G +G G G G G GP G KG G G+ RC S +A
Sbjct: 97 LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSA 156
Query: 148 FSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKET 207
FSVG +IF+ N +H+N TGKF C PG+Y+FS ++ N+
Sbjct: 157 FSVGITTSYPEERL--PIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLA 214
Query: 208 YLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTY 267
+ + + A G+ + S S ++ L+ +D+VW+ ++ + +N +FS+
Sbjct: 215 IGLVHNGQYRIKTFDANTGNHDV-ASGSTVIYLQPEDEVWLEIFFTD-QNGLFSDPGWAD 272
Query: 268 ITFSGYLV 275
FSG+L+
Sbjct: 273 SLFSGFLL 280
Score = 37.4 bits (85), Expect = 0.015
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKS 143
L G G G G G +G+ G G G G KG+KG G G R K+
Sbjct: 46 LPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKT 92
>gi|7705753 complement component 1, q subcomponent, A chain
precursor [Homo sapiens]
Length = 245
Score = 86.7 bits (213), Expect = 2e-17
Identities = 73/235 (31%), Positives = 110/235 (46%), Gaps = 32/235 (13%)
Query: 40 TEELPSPPDHAERAEEQHEKYRPSQDQGLPASRCLRCCDPGTSMYPATAVPQINITILKG 99
TE+L PD ++ E RP + +G P + G P + I LKG
Sbjct: 22 TEDLCRAPDG-----KKGEAGRPGR-RGRPGLK-------GEQGEPGAPGIRTGIQGLKG 68
Query: 100 EKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFS-VGRKKPMHS 158
++G+ G G GK G G +G G G G KG+ G+PG AFS + R PM
Sbjct: 69 DQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQPRPAFSAIRRNPPMGG 128
Query: 159 NHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEV 218
N VIFDT N + + +G+F C VPG Y+F+ V +Q E L I+ +
Sbjct: 129 N----VVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQV--LSQWEICLSIVSSSRGQ 182
Query: 219 V---ILFAQVGDRSIMQ--SQSLMLELREQDQVWV-------RLYKGERENAIFS 261
V + F ++ + Q S ++L+L++ DQVWV +Y+G +++FS
Sbjct: 183 VRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHIYQGSEADSVFS 237
>gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo
sapiens]
Length = 333
Score = 85.5 bits (210), Expect = 5e-17
Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 2/177 (1%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHS 158
G G G +G G G G G RG G KG +G G GE +AF+VG
Sbjct: 155 GPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKF 214
Query: 159 NHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEV 218
+ FD N ++H++ GKF C++ G+Y+F+ ++ ++ + + ++KN ++
Sbjct: 215 PSSDMPIKFDKILYNEFNHYDTAAGKFTCHIAGVYYFTYHITVFS-RNVQVSLVKNGVKI 273
Query: 219 VILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 275
+ S ++L+L+ D+VW+++ GER N +F++E D TF+G+L+
Sbjct: 274 LHTKDAYMSSEDQASGGIVLQLKLGDEVWLQVTGGERFNGLFADE-DDDTTFTGFLL 329
Score = 48.1 bits (113), Expect = 8e-06
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 98 KGEKGDRGDRGLQGKYGKTGSA------GARGHTGPKGQKGSMGAPG 138
KG KGD+G RG GK+G G A G RG TGP+GQKG+ G G
Sbjct: 85 KGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVG 131
Score = 42.4 bits (98), Expect = 5e-04
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 9/51 (17%)
Query: 98 KGEKGDRGDRGLQGKYGKTGSAGARGHTGP---------KGQKGSMGAPGE 139
KG+KGD G+ G G GK G++G +G G KG +GS G+PG+
Sbjct: 49 KGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGK 99
Score = 39.3 bits (90), Expect = 0.004
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 99 GEKGDRGDRGLQGKY------GKTGSAGARGHTGPKGQKGSMGAPGER 140
G G++G+RG GK G GS G+ G GPKG G MG G R
Sbjct: 68 GTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLR 115
Score = 37.7 bits (86), Expect = 0.011
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
G KGD+GD G G+ G G G G G +G G + A G
Sbjct: 47 GAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKG 86
Score = 37.0 bits (84), Expect = 0.019
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMG 135
G G +GD+G G+ G+ GS G G +G KG++G+ G
Sbjct: 44 GRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADG 80
Score = 35.0 bits (79), Expect = 0.074
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 95 TILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 139
T +G G G+ G G G+ G GA+G G G+ G G+PG+
Sbjct: 22 TCRQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGK 66
>gi|58801559 complement component 1, q subcomponent-like 3 [Homo
sapiens]
Length = 255
Score = 85.5 bits (210), Expect = 5e-17
Identities = 67/232 (28%), Positives = 101/232 (43%), Gaps = 36/232 (15%)
Query: 73 CLRCCDP--GTSMYPATAVPQINI-----TILKGEKGDRGDRGLQGKYGKTGSAGARGHT 125
C CDP GT A P + T ++G KG+ G G G G G G G
Sbjct: 28 CRMVCDPYGGTKAPSTAATPDRGLMQSLPTFIQGPKGEAGRPGKAGPRGPPGEPGPPGPM 87
Query: 126 GPKGQKGSMG---------APGERCKSHYAA----------FSVGRKKPMHSNHYYQTVI 166
GP G+KG G APG +A F G K+ + Y+ +
Sbjct: 88 GPPGEKGEPGRQGLPGPPGAPGLNAAGAISAATYSTVPKIAFYAGLKR---QHEGYEVLK 144
Query: 167 FDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNV--HTWNQKETYLHIMKNEEEVVILFAQ 224
FD NL +H++ TGKF C +PG+YFF+ +V + + + KN + AQ
Sbjct: 145 FDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAIAQ 204
Query: 225 VGDRSI-MQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 275
D++ S S++L L D+V+++L G+ + Y TFSG+++
Sbjct: 205 DADQNYDYASNSVVLHLEPGDEVYIKLDGGKAHGG----NNNKYSTFSGFII 252
>gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo
sapiens]
Length = 333
Score = 85.1 bits (209), Expect = 6e-17
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 2/177 (1%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHS 158
G G G +G G G G G RG G KG +G G GE +AF+VG
Sbjct: 155 GPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKF 214
Query: 159 NHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEV 218
+ FD N ++H++ GKF C++ G+Y+F+ ++ ++ + + ++KN ++
Sbjct: 215 PSSDVPIKFDKILYNEFNHYDTAVGKFTCHIAGVYYFTYHITVFS-RNVQVSLVKNGVKI 273
Query: 219 VILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 275
+ S S++L+L+ D++W+++ GER N +F++E D TF+G+L+
Sbjct: 274 LHTRDAYVSSEDQASGSIVLQLKLGDEMWLQVTGGERFNGLFADE-DDDTTFTGFLL 329
Score = 48.1 bits (113), Expect = 8e-06
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 98 KGEKGDRGDRGLQGKYGKTGSA------GARGHTGPKGQKGSMGAPG 138
KG KGD+G RG GK+G G A G RG TGP+GQKG+ G G
Sbjct: 85 KGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVG 131
Score = 42.7 bits (99), Expect = 4e-04
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 9/51 (17%)
Query: 98 KGEKGDRGDRGLQGKYGKTGSAGARGHTGP---------KGQKGSMGAPGE 139
KG+KGD G+ G G GK G++G +G G KG +GS G+PG+
Sbjct: 49 KGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGK 99
Score = 39.3 bits (90), Expect = 0.004
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 99 GEKGDRGDRGLQGKY------GKTGSAGARGHTGPKGQKGSMGAPGER 140
G G++G+RG GK G GS G+ G GPKG G MG G R
Sbjct: 68 GTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLR 115
Score = 35.0 bits (79), Expect = 0.074
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 95 TILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 139
T +G G G+ G G G+ G GA+G G G+ G G+PG+
Sbjct: 22 TCRQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGK 66
Score = 35.0 bits (79), Expect = 0.074
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMG 135
G G +GD+G G+ G GS G G +G KG++G+ G
Sbjct: 44 GRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADG 80
>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
sapiens]
Length = 330
Score = 85.1 bits (209), Expect = 6e-17
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 30/202 (14%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER------------------ 140
GE+G G G +GK G G AGA G GP+G KG G PG+
Sbjct: 124 GEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLP 183
Query: 141 ----CKSHY--AAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYF 194
C S + +AFSV K + FD +N H+N +GKF C VPG+Y+
Sbjct: 184 GPCSCGSGHTKSAFSVAVTKSYPRERL--PIKFDKILMNEGGHYNASSGKFVCGVPGIYY 241
Query: 195 FSLNVHTWNQKETYLHIMKNEEEVVILF-AQVGDRSIMQSQSLMLELREQDQVWVRLYKG 253
F+ ++ T K + ++ N + + F A G+ + S S +L L++ D+VW++++
Sbjct: 242 FTYDI-TLANKHLAIGLVHNGQYRIRTFDANTGNHDV-ASGSTILALKQGDEVWLQIFYS 299
Query: 254 ERENAIFSEELDTYITFSGYLV 275
E +N +F + T F+G+L+
Sbjct: 300 E-QNGLFYDPYWTDSLFTGFLI 320
Score = 36.2 bits (82), Expect = 0.033
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
G G G G+ G+ G G G GH G +G G G PG
Sbjct: 91 GPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPG 130
>gi|14149712 C1q and tumor necrosis factor related protein 5
precursor [Homo sapiens]
Length = 243
Score = 84.7 bits (208), Expect = 8e-17
Identities = 59/179 (32%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHS 158
GEKG+ G GL G G G G G GP G G P +AFS R +
Sbjct: 63 GEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPR------SAFSAKRSESRVP 116
Query: 159 NHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEV 218
+ FD VN H++ TGKF C VPG+Y+F+++ T + ++KN E +
Sbjct: 117 PPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHA-TVYRASLQFDLVKNGESI 175
Query: 219 VILFAQVG--DRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 275
F G + S M+ L +DQVWV++ G+ S + D+ TFSG+LV
Sbjct: 176 ASFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDS--TFSGFLV 232
>gi|122937273 hypothetical protein LOC131149 [Homo sapiens]
Length = 477
Score = 81.6 bits (200), Expect = 7e-16
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 8/182 (4%)
Query: 97 LKGEKGDRGDRGL---QGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRK 153
+KGEKG+ G GL G G G+ G RG TG KG +G G+ GE + +AFS G
Sbjct: 291 IKGEKGELGPPGLLGPTGPKGDIGNKGVRGPTGKKGSRGFKGSKGELARVPRSAFSAGLS 350
Query: 154 KPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMK 213
KP + + F+ N +++ TGKF C +PG Y FS ++ + + +
Sbjct: 351 KPFPPPNI--PIKFEKILYNDQGNYSPVTGKFNCSIPGTYVFSYHITVRGRPARISLVAQ 408
Query: 214 NEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGY 273
N+++ G S ++L+L DQVW+ + K N ++ D I F+G+
Sbjct: 409 NKKQFKSRETLYGQEIDQASLLVILKLSAGDQVWLEVSKD--WNGVYVSAEDDSI-FTGF 465
Query: 274 LV 275
L+
Sbjct: 466 LL 467
Score = 49.7 bits (117), Expect = 3e-06
Identities = 34/95 (35%), Positives = 41/95 (43%), Gaps = 25/95 (26%)
Query: 69 PASRCLRCCD-----------PGTSMYPATAVPQINITI--------------LKGEKGD 103
PA L CCD PG + P N+ I KGEKG
Sbjct: 94 PADFFLNCCDCCSPVPGQKGEPGETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGL 153
Query: 104 RGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
+G+RG QG G G GA+G GPKG KG++G G
Sbjct: 154 KGERGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGG 188
Score = 45.8 bits (107), Expect = 4e-05
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 65 DQGLPASRCLRCCDPGTSMYPATAVPQINITI--LKGEKGDRGD------RGLQGKYGKT 116
DQG+P PG P + NI + +KG+KG +GD +G +G G
Sbjct: 159 DQGVPGYPG----KPGAQGEPGPKGDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAM 214
Query: 117 GSAGARGHTGPKGQKGSMGAPGE 139
GS G G G KG+KG MG GE
Sbjct: 215 GSPGLHGGPGAKGEKGEMGEKGE 237
Score = 43.1 bits (100), Expect = 3e-04
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 98 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 139
KGEKGD+G G G +G G+ G +G G KG+ G G G+
Sbjct: 205 KGEKGDQGAMGSPGLHGGPGAKGEKGEMGEKGEMGDKGCCGD 246
Score = 42.7 bits (99), Expect = 4e-04
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 140
G KG++G+ G +G+ G G G G G KGQKG G GE+
Sbjct: 224 GAKGEKGEMGEKGEMGDKGCCGDSGERGGKGQKGEGGMKGEK 265
>gi|13569919 C1q and tumor necrosis factor related protein 3 isoform
a [Homo sapiens]
Length = 246
Score = 79.0 bits (193), Expect = 4e-15
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 56 QHEKYRPSQDQGLPASRCLRCCDPGTSMYPATAVP-QINITILKGEKGDRGDRGLQGKYG 114
Q E Q GLP C +CC S P + G G+ G+ G G G
Sbjct: 23 QDEYMESPQTGGLPPD-CSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEG 81
Query: 115 KTGSAGARGHTGPKGQKGSMGAPGERCKSHY---AAFSVGRKKPMHSNHYYQTVIFDTEF 171
G G +G GP+G++G G GE+ + H ++ +IF +
Sbjct: 82 AKGEKGDKGDLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVE 141
Query: 172 VNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQ-KETYLHIMKNEEEVVILFA-QVGDRS 229
N+ + F++ TG+F V G+YFF+ ++ +E Y+++M N V +++ ++ +S
Sbjct: 142 TNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKS 201
Query: 230 IMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 275
S +L+L + D+VW+R+ N + + TF+G+L+
Sbjct: 202 DTSSNHAVLKLAKGDEVWLRM-----GNGALHGDHQRFSTFAGFLL 242
>gi|148233912 C1q and tumor necrosis factor related protein 4 [Homo
sapiens]
Length = 329
Score = 78.2 bits (191), Expect = 8e-15
Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 146 AAFSVGRKKPMHSNHY-----YQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVH 200
+AFS R + + + +Q + FDTEFVN+ F+ G F C +PG YFFS +
Sbjct: 177 SAFSAARTRSLVGSDAGPGPRHQPLAFDTEFVNIGGDFDAAAGVFRCRLPGAYFFSFTLG 236
Query: 201 TWNQKETYLHIMKNEEEVVILFAQVG--DRSIMQSQSLMLELREQDQVWVRLYKGERENA 258
+K + +MKN +EV + G R MQSQS+ML LR D VW+ + + A
Sbjct: 237 KLPRKTLSVKLMKNRDEVQAMIYDDGASRRREMQSQSVMLALRRGDAVWLLSHDHDGYGA 296
Query: 259 IFSEELDTYITFSGYLV 275
+ YITFSG+LV
Sbjct: 297 YSNH--GKYITFSGFLV 311
Score = 67.8 bits (164), Expect = 1e-11
Identities = 53/156 (33%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
Query: 123 GHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFT 182
G GP PG +AFS R P+ V FD +VN+ F++ T
Sbjct: 7 GLLGPAACWALGPTPGPGSSELRSAFSAARTTPLEGTSE-MAVTFDKVYVNIGGDFDVAT 65
Query: 183 GKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQ---SQSLMLE 239
G+F C VPG YFFS K + +++N +EV L R + SQS ML+
Sbjct: 66 GQFRCRVPGAYFFSFTAGKAPHKSLSVMLVRNRDEVQALAFDEQRRPGARRAASQSAMLQ 125
Query: 240 LREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 275
L D VW+RL+ G + A+ + TFSGYLV
Sbjct: 126 LDYGDTVWLRLH-GAPQYALGAPG----ATFSGYLV 156
>gi|62739183 C1q and tumor necrosis factor related protein 3 isoform
b [Homo sapiens]
Length = 319
Score = 77.4 bits (189), Expect = 1e-14
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 12/218 (5%)
Query: 64 QDQGLPASRCLRCCDPGTSMYPATAVP-QINITILKGEKGDRGDRGLQGKYGKTGSAGAR 122
Q GLP C +CC S P + G G+ G+ G G G G G +
Sbjct: 104 QTGGLPPD-CSKCCHGDYSFRGYQGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDK 162
Query: 123 GHTGPKGQKGSMGAPGERCKSHY---AAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFN 179
G GP+G++G G GE+ + H ++ +IF + N+ + F+
Sbjct: 163 GDLGPRGERGQHGPKGEKGYPGIPPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFD 222
Query: 180 MFTGKFYCYVPGLYFFSLNVHTWNQ-KETYLHIMKNEEEVVILFA-QVGDRSIMQSQSLM 237
+ TG+F V G+YFF+ ++ +E Y+++M N V +++ ++ +S S +
Sbjct: 223 VMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAV 282
Query: 238 LELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 275
L+L + D+VW+R+ N + + TF+G+L+
Sbjct: 283 LKLAKGDEVWLRM-----GNGALHGDHQRFSTFAGFLL 315
>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
sapiens]
Length = 258
Score = 75.5 bits (184), Expect = 5e-14
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 27/217 (12%)
Query: 78 DPGTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAP 137
D G ++ + P + T+++G +G G G G G G G G GP G+KG G P
Sbjct: 47 DGGDALSEQSGAPPPS-TLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKP 105
Query: 138 GER-----------CKSHY-----AAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMF 181
G + Y AF G K P + Y+ + FD NL ++++
Sbjct: 106 GPPGLPGAGGSGAISTATYTTVPRVAFYAGLKNP---HEGYEVLKFDDVVTNLGNNYDAA 162
Query: 182 TGKFYCYVPGLYFFSLNV--HTWNQKETYLHIMKNEEEVVILFAQVGDRSI-MQSQSLML 238
+GKF C +PG YFF+ +V + + + KN + AQ D++ S S++L
Sbjct: 163 SGKFTCNIPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVIL 222
Query: 239 ELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 275
L D+V+++L G+ + Y TFSG+++
Sbjct: 223 HLDAGDEVFIKLDGGKAHGG----NSNKYSTFSGFII 255
>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
sapiens]
Length = 287
Score = 74.3 bits (181), Expect = 1e-13
Identities = 63/218 (28%), Positives = 91/218 (41%), Gaps = 46/218 (21%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG------------------ 138
++G KGD G G G G G G G GP G+KG G PG
Sbjct: 74 IQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVG 133
Query: 139 -----------ERCKSHYAAFS-------VGRKKPMHSNHYYQTVIFDTEFVNLYDHFNM 180
E + A FS VG K P Y+ + FD NL +H++
Sbjct: 134 GGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEG---YEVLKFDDVVTNLGNHYDP 190
Query: 181 FTGKFYCYVPGLYFFSLNV--HTWNQKETYLHIMKNEEEVVILFAQVGDRSI-MQSQSLM 237
TGKF C V G+YFF+ ++ + + + KN + AQ D++ S S++
Sbjct: 191 TTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVV 250
Query: 238 LELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 275
L L D+V+V+L G+ + Y TFSG+L+
Sbjct: 251 LHLDSGDEVYVKLDGGKAHGG----NNNKYSTFSGFLL 284
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 71.6 bits (174), Expect = 7e-13
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 47/230 (20%)
Query: 72 RCLRCCDP------GTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHT 125
RC CDP G PA+ P G +G+ G+ G AG RG
Sbjct: 27 RCRMVCDPHGPRGPGPDGAPASVPPF--------------PPGAKGEVGRRGKAGLRGPP 72
Query: 126 GPKGQKGSMGAPGE--------------RCKSHYA---AFSVGRKKPMHSNHYYQTVIFD 168
GP G +G G PG + Y AF G ++P + Y+ + FD
Sbjct: 73 GPPGPRGPPGEPGRPGPPGPPGPGPGGVAPAAGYVPRIAFYAGLRRP---HEGYEVLRFD 129
Query: 169 TEFVNLYDHFNMFTGKFYCYVPGLYFFSLNV--HTWNQKETYLHIMKNEEEVVILFAQVG 226
N+ + + +GKF C +PG+YFF+ +V + + +MKN + AQ
Sbjct: 130 DVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAIAQDA 189
Query: 227 DRSI-MQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 275
D++ S S++L L D+V+++L G+ + + Y TFSG+++
Sbjct: 190 DQNYDYASNSVILHLDVGDEVFIKLDGGK----VHGGNTNKYSTFSGFII 235
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 71.6 bits (174), Expect = 7e-13
Identities = 61/217 (28%), Positives = 90/217 (41%), Gaps = 43/217 (19%)
Query: 99 GEKGDRGD-----------RGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE--RCKSHY 145
G KGD G +GL G G G G RGH+G G G G PG +
Sbjct: 464 GSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPPGPPGPPGQAVMPE 523
Query: 146 AAFSVGRKKPMHSNHYYQ-------------TVI-------------FDTEFVNLYDHFN 179
G++ + TVI FD N H++
Sbjct: 524 GFIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTPIPFDKILYNRQQHYD 583
Query: 180 MFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQ-SQSLML 238
TG F C +PG+Y+FS +VH ++ + KN V+ + + + Q S S ++
Sbjct: 584 PRTGIFTCQIPGIYYFSYHVHV-KGTHVWVGLYKNGTPVMYTYDEYTKGYLDQASGSAII 642
Query: 239 ELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 275
+L E DQVW++L E N ++S E + +FSG+LV
Sbjct: 643 DLTENDQVWLQLPNAE-SNGLYSSEY-VHSSFSGFLV 677
Score = 45.4 bits (106), Expect = 5e-05
Identities = 22/42 (52%), Positives = 25/42 (59%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 140
G KG++G GL GK G TG G G GPKG GS G PG +
Sbjct: 320 GAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPK 361
Score = 45.4 bits (106), Expect = 5e-05
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 79 PGTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
PG + P PQ G KG G GL G G+TG AG G+ G KG++GS G+ G
Sbjct: 334 PGLTGPPGNMGPQ-------GPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDG 386
Query: 139 E 139
+
Sbjct: 387 K 387
Score = 41.2 bits (95), Expect = 0.001
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 98 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 140
KG+ G G GL G G G+ G GH G G +G+ G PG R
Sbjct: 409 KGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTR 451
Score = 40.8 bits (94), Expect = 0.001
Identities = 21/42 (50%), Positives = 23/42 (54%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
L G KGD G G G G G AGA+G G G+ G GAPG
Sbjct: 405 LPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPG 446
Score = 39.7 bits (91), Expect = 0.003
Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
G +G G+RG +G GK G+AGA G G G KG GAPG
Sbjct: 250 GPQGPPGERGPEG-IGKPGAAGAPGQPGIPGTKGLPGAPG 288
Score = 39.7 bits (91), Expect = 0.003
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 140
L G G+ G +G +G G G G +G TGP G G GA GER
Sbjct: 336 LTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGER 379
Score = 38.9 bits (89), Expect = 0.005
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 15/78 (19%)
Query: 78 DPGTSMYPA-TAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGP--------- 127
+PG P +AV + + L G+ G+RG G +G G G G RG GP
Sbjct: 93 EPGLPGPPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGI 152
Query: 128 -----KGQKGSMGAPGER 140
GQ+G GAPG R
Sbjct: 153 SVPGKPGQQGPTGAPGPR 170
Score = 38.9 bits (89), Expect = 0.005
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 102 GDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 140
G RG+ G+ G+ G G G G GP G G G PGER
Sbjct: 220 GKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGER 258
Score = 38.5 bits (88), Expect = 0.007
Identities = 19/40 (47%), Positives = 20/40 (50%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
GE G RG G+ G G G G G G KG GS G PG
Sbjct: 437 GEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPGPPG 476
Score = 38.1 bits (87), Expect = 0.009
Identities = 27/78 (34%), Positives = 32/78 (41%), Gaps = 11/78 (14%)
Query: 62 PSQDQGLPASRCLRCCDPGTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGA 121
P +G+P S L PG A P G G +G+RG G GK G G
Sbjct: 345 PQGPKGIPGSHGL----PGPKGETGPAGPA-------GYPGAKGERGSPGSDGKPGYPGK 393
Query: 122 RGHTGPKGQKGSMGAPGE 139
G GPKG G G G+
Sbjct: 394 PGLDGPKGNPGLPGPKGD 411
Score = 37.4 bits (85), Expect = 0.015
Identities = 37/121 (30%), Positives = 44/121 (36%), Gaps = 27/121 (22%)
Query: 38 EGTEELPSPPDHAERAEE----------QHEKYRPSQD---QGLPASRCLRCCDPGTSMY 84
+G LP PP + + + Y P D GLP R PG
Sbjct: 91 QGEPGLPGPPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRG----PPGPPGI 146
Query: 85 PATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSM-----GAPGE 139
P A + G+ G +G G G G G GA G G GQKG M G PGE
Sbjct: 147 PGPAGISV-----PGKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGE 201
Query: 140 R 140
R
Sbjct: 202 R 202
Score = 37.4 bits (85), Expect = 0.015
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 99 GEKGDRGDRGLQGK-----YGKTGSAGARGHTGPKGQKGSMGAPG 138
GEKG G G+ G+ YG G G RG GP+G G G PG
Sbjct: 174 GEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPG 218
Score = 37.4 bits (85), Expect = 0.015
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPK-----GQKGSMGAPGE 139
G+ G +GDRG G+ G G G +G G + G+ G+ GAPG+
Sbjct: 229 GQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQ 274
Score = 36.6 bits (83), Expect = 0.025
Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Query: 62 PSQDQGLPASRCLRCCDPGTSMYPATAVP--QINITILKGEKGDRGDRGLQGKYGKTGSA 119
P + GLP + DPG P P + G G+ G RG G G G
Sbjct: 399 PKGNPGLPGPKG----DPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPI 454
Query: 120 GARGHTGPKGQKGSMGAPG 138
G G G G KG G+PG
Sbjct: 455 GPPGIPGFPGSKGDPGSPG 473
Score = 35.4 bits (80), Expect = 0.056
Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 107 RGLQGKYGKTGSAGARGHTGPKGQKG--SMGAPG 138
RG QG G G AG RGH GP G G G+PG
Sbjct: 56 RGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPG 89
Score = 34.7 bits (78), Expect = 0.096
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
G G +G+ GL G G G G G GP G G+ G PG
Sbjct: 395 GLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPG 434
Score = 34.3 bits (77), Expect = 0.13
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 97 LKGEKGDRGDRGLQGK-----YGKTGSAGARGHTGPKGQKGSMGAPGER 140
+ G KG G G+ G +GK G G +G GP G G GA GE+
Sbjct: 277 IPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQ 325
Score = 34.3 bits (77), Expect = 0.13
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 105 GDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 139
G GL G G+ G AG G G KG++G G PG+
Sbjct: 299 GKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGK 333
Score = 33.5 bits (75), Expect = 0.21
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 98 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
+GE G G G++G G G G G GP+G G G G
Sbjct: 222 RGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEG 262
Score = 33.5 bits (75), Expect = 0.21
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 139
L G KG+ G G +G G G G G GP G KG G GE
Sbjct: 396 LDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGE 438
Score = 33.1 bits (74), Expect = 0.28
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 108 GLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAA 147
G G+ G TG+ G RG G KG G G G++ + Y A
Sbjct: 156 GKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGA 195
Score = 32.0 bits (71), Expect = 0.62
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
G+ G G +G +G G G GA+G GP G G G G
Sbjct: 299 GKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTG 338
Score = 32.0 bits (71), Expect = 0.62
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
L G KG+RG GL G G+ G +G G G+ G G PG
Sbjct: 303 LPGLKGERGPAGLPGG---PGAKGEQGPAGLPGKPGLTGPPG 341
Score = 28.5 bits (62), Expect = 6.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 114 GKTGSAGARGHTGPKGQKGSMGAPGE 139
G+ G+ G G GP+G G G PG+
Sbjct: 57 GEQGTPGPPGPAGPRGHPGPSGPPGK 82
>gi|87298828 complement component 1, q subcomponent, B chain
precursor [Homo sapiens]
Length = 253
Score = 71.2 bits (173), Expect = 9e-13
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 22/182 (12%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKS------HYAAFSV 150
L G+ G+ G++G G G G G +G GPKG G+ GAPG + +S AFS
Sbjct: 67 LAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKATQKIAFSA 126
Query: 151 GR--KKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETY 208
R P+ + QT+ FD N+ +++ +GKF C VPGLY+F+ H ++
Sbjct: 127 TRTINVPLRRD---QTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFT--YHASSRGNLC 181
Query: 209 LHIMKNEE--EVVILFAQVGDRSI-MQSQSLMLELREQDQVWVR------LYKGERENAI 259
+++M+ E + V+ F + + + ++L+L + + V+++ L E N+I
Sbjct: 182 VNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEGANSI 241
Query: 260 FS 261
FS
Sbjct: 242 FS 243
>gi|56786155 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 66.2 bits (160), Expect = 3e-11
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE--RCKSHY-AAFSVGRK 153
++G KG +G+ GL G GK G G G G G G G PGE R K + + F+V R+
Sbjct: 68 IRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYKQKFQSVFTVTRQ 127
Query: 154 --KPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHI 211
+P N + F+ N ++ TGKF C VPGLY+F H + + +
Sbjct: 128 THQPPAPN---SLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFV--YHASHTANLCVLL 182
Query: 212 MKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWV 248
++ +VV + + S ++L L+ ++VW+
Sbjct: 183 YRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWL 219
>gi|166235903 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 66.2 bits (160), Expect = 3e-11
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE--RCKSHY-AAFSVGRK 153
++G KG +G+ GL G GK G G G G G G G PGE R K + + F+V R+
Sbjct: 68 IRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYKQKFQSVFTVTRQ 127
Query: 154 --KPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHI 211
+P N + F+ N ++ TGKF C VPGLY+F H + + +
Sbjct: 128 THQPPAPN---SLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFV--YHASHTANLCVLL 182
Query: 212 MKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWV 248
++ +VV + + S ++L L+ ++VW+
Sbjct: 183 YRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWL 219
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 63.9 bits (154), Expect = 1e-10
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 35/210 (16%)
Query: 98 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRK---- 153
+G G+ G G G G GS G G GP G G GAPG ++ A +
Sbjct: 494 EGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEG 553
Query: 154 -------KPM--------HSNHYYQTVI------------FDTEFVNLYDHFNMFTGKFY 186
KP H+ + V+ FD N + +N TG F
Sbjct: 554 AVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFT 613
Query: 187 CYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQ-SQSLMLELREQDQ 245
C V G+Y+F+ +VH ++ + KN + + + Q S +L+LR DQ
Sbjct: 614 CPVGGVYYFAYHVHV-KGTNVWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQ 672
Query: 246 VWVRLYKGERENAIFSEELDTYITFSGYLV 275
VWV++ ++ N ++S E + +FSG+L+
Sbjct: 673 VWVQM-PSDQANGLYSTEY-IHSSFSGFLL 700
Score = 43.9 bits (102), Expect = 2e-04
Identities = 29/73 (39%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 78 DPGTSMYPATAVPQ-INITILKGEKGDR---------GDRGLQGKYGKTGSAGARGHTGP 127
+PGT P P + L G KGDR GDRG G+ G+ G G +G GP
Sbjct: 300 EPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGP 359
Query: 128 KGQKGSMGAPGER 140
G GS G PG R
Sbjct: 360 PGLPGSAGLPGRR 372
Score = 41.6 bits (96), Expect = 8e-04
Identities = 20/40 (50%), Positives = 23/40 (57%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
GE G++G +GL G G GSAG G GP G KG G G
Sbjct: 346 GEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGG 385
Score = 41.2 bits (95), Expect = 0.001
Identities = 20/44 (45%), Positives = 22/44 (50%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 140
L G +G G +G G G G G RG GP G G G PGER
Sbjct: 368 LPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGER 411
Score = 40.0 bits (92), Expect = 0.002
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
L+GE G RGD+GL+G G G G G T P G+ G+ G PG
Sbjct: 142 LRGEPGIRGDQGLRGPPGPPGLPGPSGITIP-GKPGAQGVPG 182
Score = 39.3 bits (90), Expect = 0.004
Identities = 19/40 (47%), Positives = 21/40 (52%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
G +GD+G GL GK G G G G GP G G G PG
Sbjct: 391 GIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPG 430
Score = 38.5 bits (88), Expect = 0.007
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 139
L G G G G +G+ G TG G G G GQKG +G PG+
Sbjct: 413 LPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQ 455
Score = 38.5 bits (88), Expect = 0.007
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 139
L G+ G RG G+ G G G G +G G KG+ G G PGE
Sbjct: 452 LPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGE 494
Score = 37.4 bits (85), Expect = 0.015
Identities = 18/40 (45%), Positives = 21/40 (52%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
G G +GD GL G+ G G +G G GP G G G PG
Sbjct: 442 GALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPG 481
Score = 36.6 bits (83), Expect = 0.025
Identities = 17/37 (45%), Positives = 19/37 (51%)
Query: 102 GDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
G G GL GK G G G RG G +G +G G PG
Sbjct: 123 GKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPG 159
Score = 36.2 bits (82), Expect = 0.033
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 79 PGTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
PG +P P + L G+ G G G + GK G G G GP GQ G G PG
Sbjct: 91 PGPPGFPGK--PGMGKPGLHGQPGPAGPPGFS-RMGKAGPPGLPGKVGPPGQPGLRGEPG 147
Query: 139 ER 140
R
Sbjct: 148 IR 149
Score = 35.4 bits (80), Expect = 0.056
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 13/111 (11%)
Query: 39 GTEELPSPPDHAERAEEQHEKYRPSQDQGLPASRCL----------RCCDPGTSMYPATA 88
G + +P PP Q E P D+GL + + PG P A
Sbjct: 176 GAQGVPGPPGFQGEPGPQGEPGPPG-DRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPA 234
Query: 89 -VPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
+ + + L G GD+G+ G G G G GA G GP G G +G PG
Sbjct: 235 GLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDG-VGVPG 284
Score = 35.4 bits (80), Expect = 0.056
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 139
G+KGD G G G G +G G +G GP G +G G GE
Sbjct: 445 GQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGE 485
Score = 35.0 bits (79), Expect = 0.074
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 98 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
KG+ G G GL+G G G G G GP+G G G PG
Sbjct: 447 KGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPG 487
Score = 34.7 bits (78), Expect = 0.096
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 14/56 (25%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAG--------------ARGHTGPKGQKGSMGAPGER 140
G+KG+ G G+ G G+ G+ G A G GP+G G+ G PG R
Sbjct: 249 GDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTR 304
Score = 33.5 bits (75), Expect = 0.21
Identities = 17/39 (43%), Positives = 20/39 (51%)
Query: 97 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMG 135
L G+ G G GL+G+ G G G RG GP G G G
Sbjct: 130 LPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSG 168
Score = 33.1 bits (74), Expect = 0.28
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 140
G G G +G G G+ G G G G KG G G PG R
Sbjct: 418 GPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLR 459
Score = 31.6 bits (70), Expect = 0.81
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 99 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 138
G KG G G+ G G G G +G +G KG+ G+ G PG
Sbjct: 270 GPKGPPGVDGV-GVPGAAGLPGPQGPSGAKGEPGTRGPPG 308
Score = 31.6 bits (70), Expect = 0.81
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 11/72 (15%)
Query: 67 GLPASRCLRCCDPGTSMYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTG 126
G+P R L PG P P KGE G G G G G G G G G
Sbjct: 406 GVPGERGL----PGAHGPPGPTGP-------KGEPGFTGRPGGPGVAGALGQKGDLGLPG 454
Query: 127 PKGQKGSMGAPG 138
G +G G PG
Sbjct: 455 QPGLRGPSGIPG 466
Score = 28.1 bits (61), Expect = 9.0
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 109 LQGKYGKTGSAGARGHTGPKGQKG--SMGAPG 138
L+G+ G G G RG GP G G MG PG
Sbjct: 75 LKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPG 106
>gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]
Length = 1127
Score = 62.4 bits (150), Expect = 4e-10
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 147 AFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLN-VHTWNQK 205
AFS R + Q ++FD NL + F++ G+F C V G Y F + +
Sbjct: 999 AFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNV 1058
Query: 206 ETYLHIMKNEEEVVILFAQVG--DRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEE 263
Y+++MKNEE +V +A G D + ++ L+L + DQ+W+RL++G AI+
Sbjct: 1059 PLYVNLMKNEEVLVSAYANDGAPDHETASNHAI-LQLFQGDQIWLRLHRG----AIYGSS 1113
Query: 264 LDTYITFSGYLV 275
Y TFSGYL+
Sbjct: 1114 W-KYSTFSGYLL 1124
>gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens]
Length = 793
Score = 62.4 bits (150), Expect = 4e-10
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 147 AFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLN-VHTWNQK 205
AFS R + Q ++FD NL + F++ G+F C V G Y F + +
Sbjct: 665 AFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNV 724
Query: 206 ETYLHIMKNEEEVVILFAQVG--DRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEE 263
Y+++MKNEE +V +A G D + ++ L+L + DQ+W+RL++G AI+
Sbjct: 725 PLYVNLMKNEEVLVSAYANDGAPDHETASNHAI-LQLFQGDQIWLRLHRG----AIYGSS 779
Query: 264 LDTYITFSGYLV 275
Y TFSGYL+
Sbjct: 780 W-KYSTFSGYLL 790
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,144,541
Number of Sequences: 37866
Number of extensions: 605216
Number of successful extensions: 12064
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 2141
Number of HSP's gapped (non-prelim): 6279
length of query: 281
length of database: 18,247,518
effective HSP length: 101
effective length of query: 180
effective length of database: 14,423,052
effective search space: 2596149360
effective search space used: 2596149360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.