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Search of human proteins with 38372913
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38372913 C1q and tumor necrosis factor related protein 1
[Homo sapiens]
(199 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38372917 C1q and tumor necrosis factor related protein 1 isof... 416 e-117
gi|38372913 C1q and tumor necrosis factor related protein 1 [Hom... 416 e-117
gi|13569944 C1q and tumor necrosis factor related protein 1 isof... 416 e-117
gi|32967300 C1q and tumor necrosis factor related protein 6 [Hom... 228 3e-60
gi|32967294 C1q and tumor necrosis factor related protein 6 [Hom... 228 3e-60
gi|116686136 C1q and tumor necrosis factor related protein 8 [Ho... 227 6e-60
gi|4757760 adiponectin precursor [Homo sapiens] 106 1e-23
gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 89 3e-18
gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 89 3e-18
gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 89 3e-18
gi|7705753 complement component 1, q subcomponent, A chain precu... 86 2e-17
gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom... 86 3e-17
gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho... 85 4e-17
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom... 85 4e-17
gi|14149712 C1q and tumor necrosis factor related protein 5 prec... 85 5e-17
gi|122937273 hypothetical protein LOC131149 [Homo sapiens] 82 4e-16
gi|58801559 complement component 1, q subcomponent-like 3 [Homo ... 80 1e-15
gi|148233912 C1q and tumor necrosis factor related protein 4 [Ho... 78 4e-15
gi|13569919 C1q and tumor necrosis factor related protein 3 isof... 75 3e-14
gi|62739183 C1q and tumor necrosis factor related protein 3 isof... 75 3e-14
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s... 75 4e-14
gi|154937344 complement component 1, q subcomponent-like 2 [Homo... 74 6e-14
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 74 8e-14
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 72 4e-13
gi|87298828 complement component 1, q subcomponent, B chain prec... 71 5e-13
gi|56786155 complement component 1, q subcomponent, C chain prec... 66 2e-11
gi|166235903 complement component 1, q subcomponent, C chain pre... 66 2e-11
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 64 8e-11
gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens] 62 2e-10
gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens] 62 2e-10
>gi|38372917 C1q and tumor necrosis factor related protein 1 isoform
1 [Homo sapiens]
Length = 281
Score = 416 bits (1070), Expect = e-117
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK 60
MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK
Sbjct: 83 MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK 142
Query: 61 SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 120
SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW
Sbjct: 143 SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 202
Query: 121 NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE 180
NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE
Sbjct: 203 NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE 262
Query: 181 ELDTYITFSGYLVKHATEP 199
ELDTYITFSGYLVKHATEP
Sbjct: 263 ELDTYITFSGYLVKHATEP 281
>gi|38372913 C1q and tumor necrosis factor related protein 1 [Homo
sapiens]
Length = 199
Score = 416 bits (1070), Expect = e-117
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK 60
MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK
Sbjct: 1 MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK 60
Query: 61 SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 120
SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW
Sbjct: 61 SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 120
Query: 121 NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE 180
NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE
Sbjct: 121 NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE 180
Query: 181 ELDTYITFSGYLVKHATEP 199
ELDTYITFSGYLVKHATEP
Sbjct: 181 ELDTYITFSGYLVKHATEP 199
>gi|13569944 C1q and tumor necrosis factor related protein 1 isoform
1 [Homo sapiens]
Length = 281
Score = 416 bits (1070), Expect = e-117
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK 60
MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK
Sbjct: 83 MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK 142
Query: 61 SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 120
SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW
Sbjct: 143 SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 202
Query: 121 NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE 180
NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE
Sbjct: 203 NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE 262
Query: 181 ELDTYITFSGYLVKHATEP 199
ELDTYITFSGYLVKHATEP
Sbjct: 263 ELDTYITFSGYLVKHATEP 281
>gi|32967300 C1q and tumor necrosis factor related protein 6 [Homo
sapiens]
Length = 278
Score = 228 bits (580), Expect = 3e-60
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 8 PQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFS 67
P INITILKG+KGD G GL G G+ G G G G KG KG MG+PG C+ + AFS
Sbjct: 88 PYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKRFFAFS 147
Query: 68 VGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYL 127
VGRK +HS +QT++F+ FVNL F+M TG+F + G+YFFSLNVH+WN KETY+
Sbjct: 148 VGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYV 207
Query: 128 HIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYIT 187
HIM N++E VIL+AQ +RSIMQSQS+ML+L D+VWVRL+K +RENAI+S + DTYIT
Sbjct: 208 HIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYIT 267
Query: 188 FSGYLVK 194
FSG+L+K
Sbjct: 268 FSGHLIK 274
>gi|32967294 C1q and tumor necrosis factor related protein 6 [Homo
sapiens]
Length = 278
Score = 228 bits (580), Expect = 3e-60
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 8 PQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFS 67
P INITILKG+KGD G GL G G+ G G G G KG KG MG+PG C+ + AFS
Sbjct: 88 PYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKRFFAFS 147
Query: 68 VGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYL 127
VGRK +HS +QT++F+ FVNL F+M TG+F + G+YFFSLNVH+WN KETY+
Sbjct: 148 VGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYV 207
Query: 128 HIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYIT 187
HIM N++E VIL+AQ +RSIMQSQS+ML+L D+VWVRL+K +RENAI+S + DTYIT
Sbjct: 208 HIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYIT 267
Query: 188 FSGYLVK 194
FSG+L+K
Sbjct: 268 FSGHLIK 274
>gi|116686136 C1q and tumor necrosis factor related protein 8 [Homo
sapiens]
Length = 252
Score = 227 bits (578), Expect = 6e-60
Identities = 110/191 (57%), Positives = 138/191 (72%)
Query: 8 PQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFS 67
P I+I ILKGEKG+ G RG G+ GK G GARG G +GQKG +G PG C+ YAAFS
Sbjct: 61 PTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFS 120
Query: 68 VGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYL 127
VGR++ +HS+ ++Q V FDTE VNL F++ G+F C VPG+YF SLNVHTWN KETYL
Sbjct: 121 VGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYL 180
Query: 128 HIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYIT 187
HIM N +L+AQ +RS+MQ+QSLML L D VWVR+++ +R+NAI+ E D YIT
Sbjct: 181 HIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYIT 240
Query: 188 FSGYLVKHATE 198
FSG+LVK A E
Sbjct: 241 FSGHLVKPAAE 251
>gi|4757760 adiponectin precursor [Homo sapiens]
Length = 244
Score = 106 bits (265), Expect = 1e-23
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMH 75
KGEKGD G G +G G+TG GA G G G +G G PGE + +AFSVG + +
Sbjct: 65 KGEKGDPGLIGPKGDIGETGVPGAEGPRGFPGIQGRKGEPGEGAYVYRSAFSVGLETYVT 124
Query: 76 SNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEE 135
+ + F F N +H++ TGKF+C +PGLY+F+ ++ T K+ + + K ++
Sbjct: 125 IPN--MPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHI-TVYMKDVKVSLFKKDKA 181
Query: 136 VVILFAQVGDRSIMQ-SQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLVK 194
++ + Q + ++ Q S S++L L DQVW+++Y N ++++ D TF+G+L+
Sbjct: 182 MLFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYADN-DNDSTFTGFLLY 240
Query: 195 HAT 197
H T
Sbjct: 241 HDT 243
>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
b [Homo sapiens]
Length = 289
Score = 88.6 bits (218), Expect = 3e-18
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE-------RCKSHY--AA 65
L GEKGD+G+ G +G G G G G GP G KG G G+ RC S +A
Sbjct: 90 LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSA 149
Query: 66 FSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKET 125
FSVG +IF+ N +H+N TGKF C PG+Y+FS ++ N+
Sbjct: 150 FSVGITTSYPEERL--PIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLA 207
Query: 126 YLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTY 185
+ + + A G+ + S S ++ L+ +D+VW+ ++ + +N +FS+
Sbjct: 208 IGLVHNGQYRIKTFDANTGNHDV-ASGSTVIYLQPEDEVWLEIFFTD-QNGLFSDPGWAD 265
Query: 186 ITFSGYLV 193
FSG+L+
Sbjct: 266 SLFSGFLL 273
Score = 37.4 bits (85), Expect = 0.008
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKS 61
L G G G G G +G+ G G G G KG+KG G G R K+
Sbjct: 39 LPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKT 85
>gi|206597454 C1q and tumor necrosis factor related protein 7
isoform b [Homo sapiens]
Length = 289
Score = 88.6 bits (218), Expect = 3e-18
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE-------RCKSHY--AA 65
L GEKGD+G+ G +G G G G G GP G KG G G+ RC S +A
Sbjct: 90 LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSA 149
Query: 66 FSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKET 125
FSVG +IF+ N +H+N TGKF C PG+Y+FS ++ N+
Sbjct: 150 FSVGITTSYPEERL--PIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLA 207
Query: 126 YLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTY 185
+ + + A G+ + S S ++ L+ +D+VW+ ++ + +N +FS+
Sbjct: 208 IGLVHNGQYRIKTFDANTGNHDV-ASGSTVIYLQPEDEVWLEIFFTD-QNGLFSDPGWAD 265
Query: 186 ITFSGYLV 193
FSG+L+
Sbjct: 266 SLFSGFLL 273
Score = 37.4 bits (85), Expect = 0.008
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKS 61
L G G G G G +G+ G G G G KG+KG G G R K+
Sbjct: 39 LPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKT 85
>gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
Length = 296
Score = 88.6 bits (218), Expect = 3e-18
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE-------RCKSHY--AA 65
L GEKGD+G+ G +G G G G G GP G KG G G+ RC S +A
Sbjct: 97 LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSA 156
Query: 66 FSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKET 125
FSVG +IF+ N +H+N TGKF C PG+Y+FS ++ N+
Sbjct: 157 FSVGITTSYPEERL--PIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLA 214
Query: 126 YLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTY 185
+ + + A G+ + S S ++ L+ +D+VW+ ++ + +N +FS+
Sbjct: 215 IGLVHNGQYRIKTFDANTGNHDV-ASGSTVIYLQPEDEVWLEIFFTD-QNGLFSDPGWAD 272
Query: 186 ITFSGYLV 193
FSG+L+
Sbjct: 273 SLFSGFLL 280
Score = 37.4 bits (85), Expect = 0.008
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKS 61
L G G G G G +G+ G G G G KG+KG G G R K+
Sbjct: 46 LPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKT 92
>gi|7705753 complement component 1, q subcomponent, A chain
precursor [Homo sapiens]
Length = 245
Score = 86.3 bits (212), Expect = 2e-17
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 19/178 (10%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFS-VGRKKP 73
LKG++G+ G G GK G G +G G G G KG+ G+PG AFS + R P
Sbjct: 66 LKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQPRPAFSAIRRNPP 125
Query: 74 MHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNE 133
M N VIFDT N + + +G+F C VPG Y+F+ V +Q E L I+ +
Sbjct: 126 MGGN----VVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQV--LSQWEICLSIVSSS 179
Query: 134 EEVV---ILFAQVGDRSIMQ--SQSLMLELREQDQVWV-------RLYKGERENAIFS 179
V + F ++ + Q S ++L+L++ DQVWV +Y+G +++FS
Sbjct: 180 RGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHIYQGSEADSVFS 237
Score = 36.6 bits (83), Expect = 0.014
Identities = 17/34 (50%), Positives = 20/34 (58%)
Query: 25 RGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
R GK G+ G G RG G KG++G GAPG R
Sbjct: 27 RAPDGKKGEAGRPGRRGRPGLKGEQGEPGAPGIR 60
>gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo
sapiens]
Length = 333
Score = 85.5 bits (210), Expect = 3e-17
Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 2/177 (1%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHS 76
G G G +G G G G G RG G KG +G G GE +AF+VG
Sbjct: 155 GPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKF 214
Query: 77 NHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEV 136
+ FD N ++H++ GKF C++ G+Y+F+ ++ ++ + + ++KN ++
Sbjct: 215 PSSDMPIKFDKILYNEFNHYDTAAGKFTCHIAGVYYFTYHITVFS-RNVQVSLVKNGVKI 273
Query: 137 VILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 193
+ S ++L+L+ D+VW+++ GER N +F++E D TF+G+L+
Sbjct: 274 LHTKDAYMSSEDQASGGIVLQLKLGDEVWLQVTGGERFNGLFADE-DDDTTFTGFLL 329
Score = 48.1 bits (113), Expect = 5e-06
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSA------GARGHTGPKGQKGSMGAPG 56
KG KGD+G RG GK+G G A G RG TGP+GQKG+ G G
Sbjct: 85 KGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVG 131
Score = 42.4 bits (98), Expect = 3e-04
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 9/51 (17%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGP---------KGQKGSMGAPGE 57
KG+KGD G+ G G GK G++G +G G KG +GS G+PG+
Sbjct: 49 KGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGK 99
Score = 39.3 bits (90), Expect = 0.002
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 17 GEKGDRGDRGLQGKY------GKTGSAGARGHTGPKGQKGSMGAPGER 58
G G++G+RG GK G GS G+ G GPKG G MG G R
Sbjct: 68 GTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLR 115
Score = 37.7 bits (86), Expect = 0.006
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
G KGD+GD G G+ G G G G G +G G + A G
Sbjct: 47 GAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKG 86
Score = 37.0 bits (84), Expect = 0.011
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMG 53
G G +GD+G G+ G+ GS G G +G KG++G+ G
Sbjct: 44 GRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADG 80
Score = 35.0 bits (79), Expect = 0.042
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 13 TILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
T +G G G+ G G G+ G GA+G G G+ G G+PG+
Sbjct: 22 TCRQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGK 66
>gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo
sapiens]
Length = 333
Score = 85.1 bits (209), Expect = 4e-17
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 2/177 (1%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHS 76
G G G +G G G G G RG G KG +G G GE +AF+VG
Sbjct: 155 GPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKF 214
Query: 77 NHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEV 136
+ FD N ++H++ GKF C++ G+Y+F+ ++ ++ + + ++KN ++
Sbjct: 215 PSSDVPIKFDKILYNEFNHYDTAVGKFTCHIAGVYYFTYHITVFS-RNVQVSLVKNGVKI 273
Query: 137 VILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 193
+ S S++L+L+ D++W+++ GER N +F++E D TF+G+L+
Sbjct: 274 LHTRDAYVSSEDQASGSIVLQLKLGDEMWLQVTGGERFNGLFADE-DDDTTFTGFLL 329
Score = 48.1 bits (113), Expect = 5e-06
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSA------GARGHTGPKGQKGSMGAPG 56
KG KGD+G RG GK+G G A G RG TGP+GQKG+ G G
Sbjct: 85 KGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVG 131
Score = 42.7 bits (99), Expect = 2e-04
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 9/51 (17%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGP---------KGQKGSMGAPGE 57
KG+KGD G+ G G GK G++G +G G KG +GS G+PG+
Sbjct: 49 KGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGK 99
Score = 39.3 bits (90), Expect = 0.002
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 17 GEKGDRGDRGLQGKY------GKTGSAGARGHTGPKGQKGSMGAPGER 58
G G++G+RG GK G GS G+ G GPKG G MG G R
Sbjct: 68 GTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLR 115
Score = 35.0 bits (79), Expect = 0.042
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 13 TILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
T +G G G+ G G G+ G GA+G G G+ G G+PG+
Sbjct: 22 TCRQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGK 66
Score = 35.0 bits (79), Expect = 0.042
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMG 53
G G +GD+G G+ G GS G G +G KG++G+ G
Sbjct: 44 GRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADG 80
>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
sapiens]
Length = 330
Score = 85.1 bits (209), Expect = 4e-17
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 30/202 (14%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER------------------ 58
GE+G G G +GK G G AGA G GP+G KG G PG+
Sbjct: 124 GEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLP 183
Query: 59 ----CKSHY--AAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYF 112
C S + +AFSV K + FD +N H+N +GKF C VPG+Y+
Sbjct: 184 GPCSCGSGHTKSAFSVAVTKSYPRERL--PIKFDKILMNEGGHYNASSGKFVCGVPGIYY 241
Query: 113 FSLNVHTWNQKETYLHIMKNEEEVVILF-AQVGDRSIMQSQSLMLELREQDQVWVRLYKG 171
F+ ++ T K + ++ N + + F A G+ + S S +L L++ D+VW++++
Sbjct: 242 FTYDI-TLANKHLAIGLVHNGQYRIRTFDANTGNHDV-ASGSTILALKQGDEVWLQIFYS 299
Query: 172 ERENAIFSEELDTYITFSGYLV 193
E +N +F + T F+G+L+
Sbjct: 300 E-QNGLFYDPYWTDSLFTGFLI 320
Score = 36.2 bits (82), Expect = 0.019
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
G G G G+ G+ G G G GH G +G G G PG
Sbjct: 91 GPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPG 130
Score = 27.7 bits (60), Expect = 6.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 32 GKTGSAGARGHTGPKGQKGSMGAPGE 57
G G G G GP G G MG PG+
Sbjct: 85 GPQGPPGPPGAPGPSGMMGRMGFPGK 110
>gi|14149712 C1q and tumor necrosis factor related protein 5
precursor [Homo sapiens]
Length = 243
Score = 84.7 bits (208), Expect = 5e-17
Identities = 59/179 (32%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHS 76
GEKG+ G GL G G G G G GP G G P +AFS R +
Sbjct: 63 GEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPR------SAFSAKRSESRVP 116
Query: 77 NHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEV 136
+ FD VN H++ TGKF C VPG+Y+F+++ T + ++KN E +
Sbjct: 117 PPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHA-TVYRASLQFDLVKNGESI 175
Query: 137 VILFAQVG--DRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 193
F G + S M+ L +DQVWV++ G+ S + D+ TFSG+LV
Sbjct: 176 ASFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDS--TFSGFLV 232
>gi|122937273 hypothetical protein LOC131149 [Homo sapiens]
Length = 477
Score = 81.6 bits (200), Expect = 4e-16
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 8/182 (4%)
Query: 15 LKGEKGDRGDRGL---QGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRK 71
+KGEKG+ G GL G G G+ G RG TG KG +G G+ GE + +AFS G
Sbjct: 291 IKGEKGELGPPGLLGPTGPKGDIGNKGVRGPTGKKGSRGFKGSKGELARVPRSAFSAGLS 350
Query: 72 KPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMK 131
KP + + F+ N +++ TGKF C +PG Y FS ++ + + +
Sbjct: 351 KPFPPPNI--PIKFEKILYNDQGNYSPVTGKFNCSIPGTYVFSYHITVRGRPARISLVAQ 408
Query: 132 NEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGY 191
N+++ G S ++L+L DQVW+ + K N ++ D I F+G+
Sbjct: 409 NKKQFKSRETLYGQEIDQASLLVILKLSAGDQVWLEVSKD--WNGVYVSAEDDSI-FTGF 465
Query: 192 LV 193
L+
Sbjct: 466 LL 467
Score = 49.3 bits (116), Expect = 2e-06
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
KGEKG +G+RG QG G G GA+G GPKG KG++G G
Sbjct: 148 KGEKGLKGERGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGG 188
Score = 43.9 bits (102), Expect = 9e-05
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 15 LKGEKGDRGD------RGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
+KG+KG +GD +G +G G GS G G G KG+KG MG GE
Sbjct: 189 VKGQKGSKGDTCGNCTKGEKGDQGAMGSPGLHGGPGAKGEKGEMGEKGE 237
Score = 43.1 bits (100), Expect = 2e-04
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
KGEKGD+G G G +G G+ G +G G KG+ G G G+
Sbjct: 205 KGEKGDQGAMGSPGLHGGPGAKGEKGEMGEKGEMGDKGCCGD 246
Score = 42.7 bits (99), Expect = 2e-04
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
G KG++G+ G +G+ G G G G G KGQKG G GE+
Sbjct: 224 GAKGEKGEMGEKGEMGDKGCCGDSGERGGKGQKGEGGMKGEK 265
Score = 40.0 bits (92), Expect = 0.001
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 6/47 (12%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHT------GPKGQKGSMGAPG 56
+GE G +GD+G G G G G++G T G KG +G+MG+PG
Sbjct: 172 QGEPGPKGDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMGSPG 218
Score = 39.3 bits (90), Expect = 0.002
Identities = 19/42 (45%), Positives = 21/42 (50%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
GE G G +G G G G G G GP+G KG G GER
Sbjct: 116 GETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGER 157
Score = 38.9 bits (89), Expect = 0.003
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
G KG+ G+ G+ G G G G RG+ G KG KG G G
Sbjct: 122 GPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQG 161
Score = 38.5 bits (88), Expect = 0.004
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
KGE G+ G G G G G G +G G KG++G G PG
Sbjct: 124 KGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQGVPG 164
>gi|58801559 complement component 1, q subcomponent-like 3 [Homo
sapiens]
Length = 255
Score = 80.1 bits (196), Expect = 1e-15
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 29/203 (14%)
Query: 13 TILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMG---------APGERCKSHY 63
T ++G KG+ G G G G G G G GP G+KG G APG
Sbjct: 57 TFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGAI 116
Query: 64 AA----------FSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFF 113
+A F G K+ + Y+ + FD NL +H++ TGKF C +PG+YFF
Sbjct: 117 SAATYSTVPKIAFYAGLKR---QHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFF 173
Query: 114 SLNV--HTWNQKETYLHIMKNEEEVVILFAQVGDRSI-MQSQSLMLELREQDQVWVRLYK 170
+ +V + + + KN + AQ D++ S S++L L D+V+++L
Sbjct: 174 TYHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDG 233
Query: 171 GERENAIFSEELDTYITFSGYLV 193
G+ + Y TFSG+++
Sbjct: 234 GKAHGG----NNNKYSTFSGFII 252
>gi|148233912 C1q and tumor necrosis factor related protein 4 [Homo
sapiens]
Length = 329
Score = 78.2 bits (191), Expect = 4e-15
Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 64 AAFSVGRKKPMHSNHY-----YQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVH 118
+AFS R + + + +Q + FDTEFVN+ F+ G F C +PG YFFS +
Sbjct: 177 SAFSAARTRSLVGSDAGPGPRHQPLAFDTEFVNIGGDFDAAAGVFRCRLPGAYFFSFTLG 236
Query: 119 TWNQKETYLHIMKNEEEVVILFAQVG--DRSIMQSQSLMLELREQDQVWVRLYKGERENA 176
+K + +MKN +EV + G R MQSQS+ML LR D VW+ + + A
Sbjct: 237 KLPRKTLSVKLMKNRDEVQAMIYDDGASRRREMQSQSVMLALRRGDAVWLLSHDHDGYGA 296
Query: 177 IFSEELDTYITFSGYLV 193
+ YITFSG+LV
Sbjct: 297 YSNH--GKYITFSGFLV 311
Score = 67.8 bits (164), Expect = 6e-12
Identities = 53/156 (33%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
Query: 41 GHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFT 100
G GP PG +AFS R P+ V FD +VN+ F++ T
Sbjct: 7 GLLGPAACWALGPTPGPGSSELRSAFSAARTTPLEGTSE-MAVTFDKVYVNIGGDFDVAT 65
Query: 101 GKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQ---SQSLMLE 157
G+F C VPG YFFS K + +++N +EV L R + SQS ML+
Sbjct: 66 GQFRCRVPGAYFFSFTAGKAPHKSLSVMLVRNRDEVQALAFDEQRRPGARRAASQSAMLQ 125
Query: 158 LREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 193
L D VW+RL+ G + A+ + TFSGYLV
Sbjct: 126 LDYGDTVWLRLH-GAPQYALGAPG----ATFSGYLV 156
>gi|13569919 C1q and tumor necrosis factor related protein 3 isoform
a [Homo sapiens]
Length = 246
Score = 75.5 bits (184), Expect = 3e-14
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 22/195 (11%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKP-- 73
+G G G G+ G +G G+ GA GH G KG+KG G G R + + P
Sbjct: 53 QGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGI 112
Query: 74 -------------MHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 120
H ++ +IF + N+ + F++ TG+F V G+YFF+ ++
Sbjct: 113 PPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKH 172
Query: 121 NQ-KETYLHIMKNEEEVVILFA-QVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIF 178
+E Y+++M N V +++ ++ +S S +L+L + D+VW+R+ N
Sbjct: 173 EDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM-----GNGAL 227
Query: 179 SEELDTYITFSGYLV 193
+ + TF+G+L+
Sbjct: 228 HGDHQRFSTFAGFLL 242
>gi|62739183 C1q and tumor necrosis factor related protein 3 isoform
b [Homo sapiens]
Length = 319
Score = 75.5 bits (184), Expect = 3e-14
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 22/195 (11%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKP-- 73
+G G G G+ G +G G+ GA GH G KG+KG G G R + + P
Sbjct: 126 QGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGI 185
Query: 74 -------------MHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 120
H ++ +IF + N+ + F++ TG+F V G+YFF+ ++
Sbjct: 186 PPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKH 245
Query: 121 NQ-KETYLHIMKNEEEVVILFA-QVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIF 178
+E Y+++M N V +++ ++ +S S +L+L + D+VW+R+ N
Sbjct: 246 EDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM-----GNGAL 300
Query: 179 SEELDTYITFSGYLV 193
+ + TF+G+L+
Sbjct: 301 HGDHQRFSTFAGFLL 315
>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
sapiens]
Length = 258
Score = 75.1 bits (183), Expect = 4e-14
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 26/200 (13%)
Query: 13 TILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER-----------CKS 61
T+++G +G G G G G G G G GP G+KG G PG +
Sbjct: 63 TLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTA 122
Query: 62 HY-----AAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLN 116
Y AF G K P + Y+ + FD NL ++++ +GKF C +PG YFF+ +
Sbjct: 123 TYTTVPRVAFYAGLKNP---HEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYH 179
Query: 117 V--HTWNQKETYLHIMKNEEEVVILFAQVGDRSI-MQSQSLMLELREQDQVWVRLYKGER 173
V + + + KN + AQ D++ S S++L L D+V+++L G+
Sbjct: 180 VLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGKA 239
Query: 174 ENAIFSEELDTYITFSGYLV 193
+ Y TFSG+++
Sbjct: 240 HGG----NSNKYSTFSGFII 255
>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
sapiens]
Length = 287
Score = 74.3 bits (181), Expect = 6e-14
Identities = 63/218 (28%), Positives = 91/218 (41%), Gaps = 46/218 (21%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG------------------ 56
++G KGD G G G G G G G GP G+KG G PG
Sbjct: 74 IQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVG 133
Query: 57 -----------ERCKSHYAAFS-------VGRKKPMHSNHYYQTVIFDTEFVNLYDHFNM 98
E + A FS VG K P Y+ + FD NL +H++
Sbjct: 134 GGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEG---YEVLKFDDVVTNLGNHYDP 190
Query: 99 FTGKFYCYVPGLYFFSLNV--HTWNQKETYLHIMKNEEEVVILFAQVGDRSI-MQSQSLM 155
TGKF C V G+YFF+ ++ + + + KN + AQ D++ S S++
Sbjct: 191 TTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVV 250
Query: 156 LELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 193
L L D+V+V+L G+ + Y TFSG+L+
Sbjct: 251 LHLDSGDEVYVKLDGGKAHGG----NNNKYSTFSGFLL 284
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 73.9 bits (180), Expect = 8e-14
Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 18/188 (9%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE-----RCKSHYA---AFSV 68
G KG+ G RG G G G G RG G G+ G G PG + Y AF
Sbjct: 55 GAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGPGPGGVAPAAGYVPRIAFYA 114
Query: 69 GRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNV--HTWNQKETY 126
G ++P + Y+ + FD N+ + + +GKF C +PG+YFF+ +V + +
Sbjct: 115 GLRRP---HEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMW 171
Query: 127 LHIMKNEEEVVILFAQVGDRSI-MQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTY 185
+MKN + AQ D++ S S++L L D+V+++L G+ + + Y
Sbjct: 172 ADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGK----VHGGNTNKY 227
Query: 186 ITFSGYLV 193
TFSG+++
Sbjct: 228 STFSGFII 235
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 71.6 bits (174), Expect = 4e-13
Identities = 61/217 (28%), Positives = 90/217 (41%), Gaps = 43/217 (19%)
Query: 17 GEKGDRGD-----------RGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE--RCKSHY 63
G KGD G +GL G G G G RGH+G G G G PG +
Sbjct: 464 GSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPPGPPGPPGQAVMPE 523
Query: 64 AAFSVGRKKPMHSNHYYQ-------------TVI-------------FDTEFVNLYDHFN 97
G++ + TVI FD N H++
Sbjct: 524 GFIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTPIPFDKILYNRQQHYD 583
Query: 98 MFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQ-SQSLML 156
TG F C +PG+Y+FS +VH ++ + KN V+ + + + Q S S ++
Sbjct: 584 PRTGIFTCQIPGIYYFSYHVHV-KGTHVWVGLYKNGTPVMYTYDEYTKGYLDQASGSAII 642
Query: 157 ELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 193
+L E DQVW++L E N ++S E + +FSG+LV
Sbjct: 643 DLTENDQVWLQLPNAE-SNGLYSSEY-VHSSFSGFLV 677
Score = 45.4 bits (106), Expect = 3e-05
Identities = 22/42 (52%), Positives = 25/42 (59%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
G KG++G GL GK G TG G G GPKG GS G PG +
Sbjct: 320 GAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPK 361
Score = 44.3 bits (103), Expect = 7e-05
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
+G KG G GL G G+TG AG G+ G KG++GS G+ G+
Sbjct: 346 QGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGK 387
Score = 41.2 bits (95), Expect = 6e-04
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
KG+ G G GL G G G+ G GH G G +G+ G PG R
Sbjct: 409 KGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTR 451
Score = 40.8 bits (94), Expect = 8e-04
Identities = 21/42 (50%), Positives = 23/42 (54%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
L G KGD G G G G G AGA+G G G+ G GAPG
Sbjct: 405 LPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPG 446
Score = 39.7 bits (91), Expect = 0.002
Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
G +G G+RG +G GK G+AGA G G G KG GAPG
Sbjct: 250 GPQGPPGERGPEG-IGKPGAAGAPGQPGIPGTKGLPGAPG 288
Score = 39.7 bits (91), Expect = 0.002
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
L G G+ G +G +G G G G +G TGP G G GA GER
Sbjct: 336 LTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGER 379
Score = 38.9 bits (89), Expect = 0.003
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 20 GDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
G RG+ G+ G+ G G G G GP G G G PGER
Sbjct: 220 GKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGER 258
Score = 38.5 bits (88), Expect = 0.004
Identities = 19/40 (47%), Positives = 20/40 (50%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
GE G RG G+ G G G G G G KG GS G PG
Sbjct: 437 GEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPGPPG 476
Score = 38.1 bits (87), Expect = 0.005
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 14/68 (20%)
Query: 5 TAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGP--------------KGQKG 50
+AV + + L G+ G+RG G +G G G G RG GP GQ+G
Sbjct: 103 SAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQG 162
Query: 51 SMGAPGER 58
GAPG R
Sbjct: 163 PTGAPGPR 170
Score = 37.4 bits (85), Expect = 0.008
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 17 GEKGDRGDRGLQGK-----YGKTGSAGARGHTGPKGQKGSMGAPG 56
GEKG G G+ G+ YG G G RG GP+G G G PG
Sbjct: 174 GEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPG 218
Score = 37.4 bits (85), Expect = 0.008
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPK-----GQKGSMGAPGE 57
G+ G +GDRG G+ G G G +G G + G+ G+ GAPG+
Sbjct: 229 GQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQ 274
Score = 37.0 bits (84), Expect = 0.011
Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSM-----GAPGER 58
G+ G +G G G G G GA G G GQKG M G PGER
Sbjct: 156 GKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGER 202
Score = 36.6 bits (83), Expect = 0.014
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
G G +G+RG G GK G G G GPKG G G G+
Sbjct: 371 GYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGD 411
Score = 36.6 bits (83), Expect = 0.014
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGH---TGPKGQKGSMGAPG 56
KGE+G G G G GK G G +G+ GPKG G G PG
Sbjct: 376 KGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPG 419
Score = 35.4 bits (80), Expect = 0.032
Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 25 RGLQGKYGKTGSAGARGHTGPKGQKG--SMGAPG 56
RG QG G G AG RGH GP G G G+PG
Sbjct: 56 RGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPG 89
Score = 35.4 bits (80), Expect = 0.032
Identities = 18/40 (45%), Positives = 19/40 (47%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
G KG+RG G GK G G G G G G G G PG
Sbjct: 374 GAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPG 413
Score = 34.7 bits (78), Expect = 0.055
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
G G +G+ GL G G G G G GP G G+ G PG
Sbjct: 395 GLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPG 434
Score = 34.3 bits (77), Expect = 0.072
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 15 LKGEKGDRGDRGLQGK-----YGKTGSAGARGHTGPKGQKGSMGAPGER 58
+ G KG G G+ G +GK G G +G GP G G GA GE+
Sbjct: 277 IPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQ 325
Score = 34.3 bits (77), Expect = 0.072
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 23 GDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
G GL G G+ G AG G G KG++G G PG+
Sbjct: 299 GKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGK 333
Score = 34.3 bits (77), Expect = 0.072
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
+ G G+ G RG G G G G G G G KG G+PG
Sbjct: 432 MPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPG 473
Score = 33.5 bits (75), Expect = 0.12
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
+GE G G G++G G G G G GP+G G G G
Sbjct: 222 RGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEG 262
Score = 33.5 bits (75), Expect = 0.12
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
L G KG+ G G +G G G G G GP G KG G GE
Sbjct: 396 LDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGE 438
Score = 33.1 bits (74), Expect = 0.16
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 26 GLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAA 65
G G+ G TG+ G RG G KG G G G++ + Y A
Sbjct: 156 GKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGA 195
Score = 32.0 bits (71), Expect = 0.36
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
G+ G G +G +G G G GA+G GP G G G G
Sbjct: 299 GKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTG 338
Score = 32.0 bits (71), Expect = 0.36
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
L G KG+RG GL G G+ G +G G G+ G G PG
Sbjct: 303 LPGLKGERGPAGLPGG---PGAKGEQGPAGLPGKPGLTGPPG 341
Score = 31.6 bits (70), Expect = 0.47
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
G G +G G G+ G G+ G G GP G G G PG +
Sbjct: 425 GPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSK 466
Score = 29.3 bits (64), Expect = 2.3
Identities = 17/43 (39%), Positives = 18/43 (41%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
KG G G +G G G G G G G KG G G G R
Sbjct: 400 KGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPR 442
Score = 28.5 bits (62), Expect = 3.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 32 GKTGSAGARGHTGPKGQKGSMGAPGE 57
G+ G+ G G GP+G G G PG+
Sbjct: 57 GEQGTPGPPGPAGPRGHPGPSGPPGK 82
>gi|87298828 complement component 1, q subcomponent, B chain
precursor [Homo sapiens]
Length = 253
Score = 71.2 bits (173), Expect = 5e-13
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 22/182 (12%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKS------HYAAFSV 68
L G+ G+ G++G G G G G +G GPKG G+ GAPG + +S AFS
Sbjct: 67 LAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKATQKIAFSA 126
Query: 69 GR--KKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETY 126
R P+ + QT+ FD N+ +++ +GKF C VPGLY+F+ H ++
Sbjct: 127 TRTINVPLRRD---QTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFT--YHASSRGNLC 181
Query: 127 LHIMKNEE--EVVILFAQVGDRSI-MQSQSLMLELREQDQVWVR------LYKGERENAI 177
+++M+ E + V+ F + + + ++L+L + + V+++ L E N+I
Sbjct: 182 VNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEGANSI 241
Query: 178 FS 179
FS
Sbjct: 242 FS 243
>gi|56786155 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 66.2 bits (160), Expect = 2e-11
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE--RCKSHY-AAFSVGRK 71
++G KG +G+ GL G GK G G G G G G G PGE R K + + F+V R+
Sbjct: 68 IRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYKQKFQSVFTVTRQ 127
Query: 72 --KPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHI 129
+P N + F+ N ++ TGKF C VPGLY+F H + + +
Sbjct: 128 THQPPAPN---SLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFV--YHASHTANLCVLL 182
Query: 130 MKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWV 166
++ +VV + + S ++L L+ ++VW+
Sbjct: 183 YRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWL 219
>gi|166235903 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 66.2 bits (160), Expect = 2e-11
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE--RCKSHY-AAFSVGRK 71
++G KG +G+ GL G GK G G G G G G G PGE R K + + F+V R+
Sbjct: 68 IRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYKQKFQSVFTVTRQ 127
Query: 72 --KPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHI 129
+P N + F+ N ++ TGKF C VPGLY+F H + + +
Sbjct: 128 THQPPAPN---SLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFV--YHASHTANLCVLL 182
Query: 130 MKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWV 166
++ +VV + + S ++L L+ ++VW+
Sbjct: 183 YRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWL 219
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 63.9 bits (154), Expect = 8e-11
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 35/210 (16%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRK---- 71
+G G+ G G G G GS G G GP G G GAPG ++ A +
Sbjct: 494 EGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEG 553
Query: 72 -------KPM--------HSNHYYQTVI------------FDTEFVNLYDHFNMFTGKFY 104
KP H+ + V+ FD N + +N TG F
Sbjct: 554 AVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFT 613
Query: 105 CYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQ-SQSLMLELREQDQ 163
C V G+Y+F+ +VH ++ + KN + + + Q S +L+LR DQ
Sbjct: 614 CPVGGVYYFAYHVHV-KGTNVWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQ 672
Query: 164 VWVRLYKGERENAIFSEELDTYITFSGYLV 193
VWV++ ++ N ++S E + +FSG+L+
Sbjct: 673 VWVQM-PSDQANGLYSTEY-IHSSFSGFLL 700
Score = 42.4 bits (98), Expect = 3e-04
Identities = 24/53 (45%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
Query: 15 LKGEKGDR---------GDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
L G KGDR GDRG G+ G+ G G +G GP G GS G PG R
Sbjct: 320 LPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRR 372
Score = 41.6 bits (96), Expect = 4e-04
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGA---RGHTGPKGQKGSMGAPG 56
GE G++G +GL G G GSAG RG GPKG+ G G PG
Sbjct: 346 GEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPG 388
Score = 41.2 bits (95), Expect = 6e-04
Identities = 20/44 (45%), Positives = 22/44 (50%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
L G +G G +G G G G G RG GP G G G PGER
Sbjct: 368 LPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGER 411
Score = 40.0 bits (92), Expect = 0.001
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
L+GE G RGD+GL+G G G G G T P G+ G+ G PG
Sbjct: 142 LRGEPGIRGDQGLRGPPGPPGLPGPSGITIP-GKPGAQGVPG 182
Score = 39.3 bits (90), Expect = 0.002
Identities = 19/40 (47%), Positives = 21/40 (52%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
G +GD+G GL GK G G G G GP G G G PG
Sbjct: 391 GIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPG 430
Score = 38.5 bits (88), Expect = 0.004
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
L G G G G +G+ G TG G G G GQKG +G PG+
Sbjct: 413 LPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQ 455
Score = 38.5 bits (88), Expect = 0.004
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
L G+ G RG G+ G G G G +G G KG+ G G PGE
Sbjct: 452 LPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGE 494
Score = 37.4 bits (85), Expect = 0.008
Identities = 18/40 (45%), Positives = 21/40 (52%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
G G +GD GL G+ G G +G G GP G G G PG
Sbjct: 442 GALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPG 481
Score = 36.6 bits (83), Expect = 0.014
Identities = 17/37 (45%), Positives = 19/37 (51%)
Query: 20 GDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
G G GL GK G G G RG G +G +G G PG
Sbjct: 123 GKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPG 159
Score = 35.8 bits (81), Expect = 0.025
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 11/54 (20%)
Query: 16 KGEKGDRGDRGLQGK--YGKTGSAGARGHTGP---------KGQKGSMGAPGER 58
KGE G RG GL G YG G G +G GP +G+ G G PGE+
Sbjct: 298 KGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQ 351
Score = 35.4 bits (80), Expect = 0.032
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
L G+ G G G + GK G G G GP GQ G G PG R
Sbjct: 107 LHGQPGPAGPPGFS-RMGKAGPPGLPGKVGPPGQPGLRGEPGIR 149
Score = 35.4 bits (80), Expect = 0.032
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
G+KGD G G G G +G G +G GP G +G G GE
Sbjct: 445 GQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGE 485
Score = 35.0 bits (79), Expect = 0.042
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
L G GD+G+ G G G G GA G GP G G +G PG
Sbjct: 244 LPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDG-VGVPG 284
Score = 35.0 bits (79), Expect = 0.042
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
KG+ G G GL+G G G G G GP+G G G PG
Sbjct: 447 KGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPG 487
Score = 34.7 bits (78), Expect = 0.055
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
+GE G GDRGL+G G G G G G G G G PG
Sbjct: 193 QGEPGPPGDRGLKGDNG-VGQPGLPGAPGQGGAPGPPGLPG 232
Score = 34.7 bits (78), Expect = 0.055
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 14/56 (25%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAG--------------ARGHTGPKGQKGSMGAPGER 58
G+KG+ G G+ G G+ G+ G A G GP+G G+ G PG R
Sbjct: 249 GDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTR 304
Score = 33.5 bits (75), Expect = 0.12
Identities = 17/39 (43%), Positives = 20/39 (51%)
Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMG 53
L G+ G G GL+G+ G G G RG GP G G G
Sbjct: 130 LPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSG 168
Score = 33.1 bits (74), Expect = 0.16
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
G G G +G G G+ G G G G KG G G PG R
Sbjct: 418 GPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLR 459
Score = 32.7 bits (73), Expect = 0.21
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 17 GEKGDRGDRGLQGK--YGKTGSAGARGHTGPKGQKGSMGAPGER 58
G+ G G GL G GK G G G G KG+ G G PG R
Sbjct: 220 GQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPR 263
Score = 31.6 bits (70), Expect = 0.47
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPK-----GQKGSMGAPGE 57
G +G G G QG+ G G G G G K GQ G GAPG+
Sbjct: 176 GAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQ 221
Score = 31.6 bits (70), Expect = 0.47
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
G KG G G+ G G G G +G +G KG+ G+ G PG
Sbjct: 270 GPKGPPGVDGV-GVPGAAGLPGPQGPSGAKGEPGTRGPPG 308
Score = 30.4 bits (67), Expect = 1.0
Identities = 17/41 (41%), Positives = 18/41 (43%)
Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
KGE G G G G G G G G G G +G G PG
Sbjct: 426 KGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPG 466
Score = 29.3 bits (64), Expect = 2.3
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 17 GEKGDRGDRGL--QGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
G G G GL G G G+ G +G +GP G G G PG
Sbjct: 226 GPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPG 267
Score = 28.1 bits (61), Expect = 5.1
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 27 LQGKYGKTGSAGARGHTGPKGQKG--SMGAPG 56
L+G+ G G G RG GP G G MG PG
Sbjct: 75 LKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPG 106
>gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]
Length = 1127
Score = 62.4 bits (150), Expect = 2e-10
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 65 AFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLN-VHTWNQK 123
AFS R + Q ++FD NL + F++ G+F C V G Y F + +
Sbjct: 999 AFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNV 1058
Query: 124 ETYLHIMKNEEEVVILFAQVG--DRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEE 181
Y+++MKNEE +V +A G D + ++ L+L + DQ+W+RL++G AI+
Sbjct: 1059 PLYVNLMKNEEVLVSAYANDGAPDHETASNHAI-LQLFQGDQIWLRLHRG----AIYGSS 1113
Query: 182 LDTYITFSGYLV 193
Y TFSGYL+
Sbjct: 1114 W-KYSTFSGYLL 1124
>gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens]
Length = 793
Score = 62.4 bits (150), Expect = 2e-10
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 65 AFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLN-VHTWNQK 123
AFS R + Q ++FD NL + F++ G+F C V G Y F + +
Sbjct: 665 AFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNV 724
Query: 124 ETYLHIMKNEEEVVILFAQVG--DRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEE 181
Y+++MKNEE +V +A G D + ++ L+L + DQ+W+RL++G AI+
Sbjct: 725 PLYVNLMKNEEVLVSAYANDGAPDHETASNHAI-LQLFQGDQIWLRLHRG----AIYGSS 779
Query: 182 LDTYITFSGYLV 193
Y TFSGYL+
Sbjct: 780 W-KYSTFSGYLL 790
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,922,787
Number of Sequences: 37866
Number of extensions: 359569
Number of successful extensions: 11015
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1104
Number of HSP's gapped (non-prelim): 7307
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.