Guide to the Human Genome
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Search of human proteins with 38372913

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38372913 C1q and tumor necrosis factor related protein 1
[Homo sapiens]
         (199 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|38372917 C1q and tumor necrosis factor related protein 1 isof...   416   e-117
gi|38372913 C1q and tumor necrosis factor related protein 1 [Hom...   416   e-117
gi|13569944 C1q and tumor necrosis factor related protein 1 isof...   416   e-117
gi|32967300 C1q and tumor necrosis factor related protein 6 [Hom...   228   3e-60
gi|32967294 C1q and tumor necrosis factor related protein 6 [Hom...   228   3e-60
gi|116686136 C1q and tumor necrosis factor related protein 8 [Ho...   227   6e-60
gi|4757760 adiponectin precursor [Homo sapiens]                       106   1e-23
gi|13994280 C1q and tumor necrosis factor related protein 7 isof...    89   3e-18
gi|206597454 C1q and tumor necrosis factor related protein 7 iso...    89   3e-18
gi|206597452 C1q and tumor necrosis factor related protein 7 iso...    89   3e-18
gi|7705753 complement component 1, q subcomponent, A chain precu...    86   2e-17
gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom...    86   3e-17
gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho...    85   4e-17
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom...    85   4e-17
gi|14149712 C1q and tumor necrosis factor related protein 5 prec...    85   5e-17
gi|122937273 hypothetical protein LOC131149 [Homo sapiens]             82   4e-16
gi|58801559 complement component 1, q subcomponent-like 3 [Homo ...    80   1e-15
gi|148233912 C1q and tumor necrosis factor related protein 4 [Ho...    78   4e-15
gi|13569919 C1q and tumor necrosis factor related protein 3 isof...    75   3e-14
gi|62739183 C1q and tumor necrosis factor related protein 3 isof...    75   3e-14
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s...    75   4e-14
gi|154937344 complement component 1, q subcomponent-like 2 [Homo...    74   6e-14
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ...    74   8e-14
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]           72   4e-13
gi|87298828 complement component 1, q subcomponent, B chain prec...    71   5e-13
gi|56786155 complement component 1, q subcomponent, C chain prec...    66   2e-11
gi|166235903 complement component 1, q subcomponent, C chain pre...    66   2e-11
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]                64   8e-11
gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]           62   2e-10
gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens]           62   2e-10

>gi|38372917 C1q and tumor necrosis factor related protein 1 isoform
           1 [Homo sapiens]
          Length = 281

 Score =  416 bits (1070), Expect = e-117
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK 60
           MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK
Sbjct: 83  MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK 142

Query: 61  SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 120
           SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW
Sbjct: 143 SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 202

Query: 121 NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE 180
           NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE
Sbjct: 203 NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE 262

Query: 181 ELDTYITFSGYLVKHATEP 199
           ELDTYITFSGYLVKHATEP
Sbjct: 263 ELDTYITFSGYLVKHATEP 281


>gi|38372913 C1q and tumor necrosis factor related protein 1 [Homo
           sapiens]
          Length = 199

 Score =  416 bits (1070), Expect = e-117
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK 60
           MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK
Sbjct: 1   MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK 60

Query: 61  SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 120
           SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW
Sbjct: 61  SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 120

Query: 121 NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE 180
           NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE
Sbjct: 121 NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE 180

Query: 181 ELDTYITFSGYLVKHATEP 199
           ELDTYITFSGYLVKHATEP
Sbjct: 181 ELDTYITFSGYLVKHATEP 199


>gi|13569944 C1q and tumor necrosis factor related protein 1 isoform
           1 [Homo sapiens]
          Length = 281

 Score =  416 bits (1070), Expect = e-117
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK 60
           MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK
Sbjct: 83  MYPATAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCK 142

Query: 61  SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 120
           SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW
Sbjct: 143 SHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 202

Query: 121 NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE 180
           NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE
Sbjct: 203 NQKETYLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSE 262

Query: 181 ELDTYITFSGYLVKHATEP 199
           ELDTYITFSGYLVKHATEP
Sbjct: 263 ELDTYITFSGYLVKHATEP 281


>gi|32967300 C1q and tumor necrosis factor related protein 6 [Homo
           sapiens]
          Length = 278

 Score =  228 bits (580), Expect = 3e-60
 Identities = 110/187 (58%), Positives = 139/187 (74%)

Query: 8   PQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFS 67
           P INITILKG+KGD G  GL G  G+ G  G  G  G KG KG MG+PG  C+  + AFS
Sbjct: 88  PYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKRFFAFS 147

Query: 68  VGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYL 127
           VGRK  +HS   +QT++F+  FVNL   F+M TG+F   + G+YFFSLNVH+WN KETY+
Sbjct: 148 VGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYV 207

Query: 128 HIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYIT 187
           HIM N++E VIL+AQ  +RSIMQSQS+ML+L   D+VWVRL+K +RENAI+S + DTYIT
Sbjct: 208 HIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYIT 267

Query: 188 FSGYLVK 194
           FSG+L+K
Sbjct: 268 FSGHLIK 274


>gi|32967294 C1q and tumor necrosis factor related protein 6 [Homo
           sapiens]
          Length = 278

 Score =  228 bits (580), Expect = 3e-60
 Identities = 110/187 (58%), Positives = 139/187 (74%)

Query: 8   PQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFS 67
           P INITILKG+KGD G  GL G  G+ G  G  G  G KG KG MG+PG  C+  + AFS
Sbjct: 88  PYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKRFFAFS 147

Query: 68  VGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYL 127
           VGRK  +HS   +QT++F+  FVNL   F+M TG+F   + G+YFFSLNVH+WN KETY+
Sbjct: 148 VGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYV 207

Query: 128 HIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYIT 187
           HIM N++E VIL+AQ  +RSIMQSQS+ML+L   D+VWVRL+K +RENAI+S + DTYIT
Sbjct: 208 HIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYIT 267

Query: 188 FSGYLVK 194
           FSG+L+K
Sbjct: 268 FSGHLIK 274


>gi|116686136 C1q and tumor necrosis factor related protein 8 [Homo
           sapiens]
          Length = 252

 Score =  227 bits (578), Expect = 6e-60
 Identities = 110/191 (57%), Positives = 138/191 (72%)

Query: 8   PQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFS 67
           P I+I ILKGEKG+ G RG  G+ GK G  GARG  G +GQKG +G PG  C+  YAAFS
Sbjct: 61  PTIDIEILKGEKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFS 120

Query: 68  VGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYL 127
           VGR++ +HS+ ++Q V FDTE VNL   F++  G+F C VPG+YF SLNVHTWN KETYL
Sbjct: 121 VGRREGLHSSDHFQAVPFDTELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYL 180

Query: 128 HIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYIT 187
           HIM N     +L+AQ  +RS+MQ+QSLML L   D VWVR+++ +R+NAI+ E  D YIT
Sbjct: 181 HIMLNRRPAAVLYAQPSERSVMQAQSLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYIT 240

Query: 188 FSGYLVKHATE 198
           FSG+LVK A E
Sbjct: 241 FSGHLVKPAAE 251


>gi|4757760 adiponectin precursor [Homo sapiens]
          Length = 244

 Score =  106 bits (265), Expect = 1e-23
 Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 5/183 (2%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMH 75
           KGEKGD G  G +G  G+TG  GA G  G  G +G  G PGE    + +AFSVG +  + 
Sbjct: 65  KGEKGDPGLIGPKGDIGETGVPGAEGPRGFPGIQGRKGEPGEGAYVYRSAFSVGLETYVT 124

Query: 76  SNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEE 135
             +    + F   F N  +H++  TGKF+C +PGLY+F+ ++ T   K+  + + K ++ 
Sbjct: 125 IPN--MPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHI-TVYMKDVKVSLFKKDKA 181

Query: 136 VVILFAQVGDRSIMQ-SQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLVK 194
           ++  + Q  + ++ Q S S++L L   DQVW+++Y     N ++++  D   TF+G+L+ 
Sbjct: 182 MLFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYADN-DNDSTFTGFLLY 240

Query: 195 HAT 197
           H T
Sbjct: 241 HDT 243


>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
           b [Homo sapiens]
          Length = 289

 Score = 88.6 bits (218), Expect = 3e-18
 Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 13/188 (6%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE-------RCKSHY--AA 65
           L GEKGD+G+ G +G  G  G  G  G  GP G KG  G  G+       RC S    +A
Sbjct: 90  LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSA 149

Query: 66  FSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKET 125
           FSVG             +IF+    N  +H+N  TGKF C  PG+Y+FS ++   N+   
Sbjct: 150 FSVGITTSYPEERL--PIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLA 207

Query: 126 YLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTY 185
              +   +  +    A  G+  +  S S ++ L+ +D+VW+ ++  + +N +FS+     
Sbjct: 208 IGLVHNGQYRIKTFDANTGNHDV-ASGSTVIYLQPEDEVWLEIFFTD-QNGLFSDPGWAD 265

Query: 186 ITFSGYLV 193
             FSG+L+
Sbjct: 266 SLFSGFLL 273



 Score = 37.4 bits (85), Expect = 0.008
 Identities = 19/47 (40%), Positives = 23/47 (48%)

Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKS 61
          L G  G  G  G  G +G+ G  G  G  G KG+KG  G  G R K+
Sbjct: 39 LPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKT 85


>gi|206597454 C1q and tumor necrosis factor related protein 7
           isoform b [Homo sapiens]
          Length = 289

 Score = 88.6 bits (218), Expect = 3e-18
 Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 13/188 (6%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE-------RCKSHY--AA 65
           L GEKGD+G+ G +G  G  G  G  G  GP G KG  G  G+       RC S    +A
Sbjct: 90  LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSA 149

Query: 66  FSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKET 125
           FSVG             +IF+    N  +H+N  TGKF C  PG+Y+FS ++   N+   
Sbjct: 150 FSVGITTSYPEERL--PIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLA 207

Query: 126 YLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTY 185
              +   +  +    A  G+  +  S S ++ L+ +D+VW+ ++  + +N +FS+     
Sbjct: 208 IGLVHNGQYRIKTFDANTGNHDV-ASGSTVIYLQPEDEVWLEIFFTD-QNGLFSDPGWAD 265

Query: 186 ITFSGYLV 193
             FSG+L+
Sbjct: 266 SLFSGFLL 273



 Score = 37.4 bits (85), Expect = 0.008
 Identities = 19/47 (40%), Positives = 23/47 (48%)

Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKS 61
          L G  G  G  G  G +G+ G  G  G  G KG+KG  G  G R K+
Sbjct: 39 LPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKT 85


>gi|206597452 C1q and tumor necrosis factor related protein 7
           isoform a [Homo sapiens]
          Length = 296

 Score = 88.6 bits (218), Expect = 3e-18
 Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 13/188 (6%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE-------RCKSHY--AA 65
           L GEKGD+G+ G +G  G  G  G  G  GP G KG  G  G+       RC S    +A
Sbjct: 97  LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSA 156

Query: 66  FSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKET 125
           FSVG             +IF+    N  +H+N  TGKF C  PG+Y+FS ++   N+   
Sbjct: 157 FSVGITTSYPEERL--PIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLANKHLA 214

Query: 126 YLHIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTY 185
              +   +  +    A  G+  +  S S ++ L+ +D+VW+ ++  + +N +FS+     
Sbjct: 215 IGLVHNGQYRIKTFDANTGNHDV-ASGSTVIYLQPEDEVWLEIFFTD-QNGLFSDPGWAD 272

Query: 186 ITFSGYLV 193
             FSG+L+
Sbjct: 273 SLFSGFLL 280



 Score = 37.4 bits (85), Expect = 0.008
 Identities = 19/47 (40%), Positives = 23/47 (48%)

Query: 15 LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKS 61
          L G  G  G  G  G +G+ G  G  G  G KG+KG  G  G R K+
Sbjct: 46 LPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKT 92


>gi|7705753 complement component 1, q subcomponent, A chain
           precursor [Homo sapiens]
          Length = 245

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 19/178 (10%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFS-VGRKKP 73
           LKG++G+ G  G  GK G  G +G  G  G  G KG+ G+PG        AFS + R  P
Sbjct: 66  LKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQPRPAFSAIRRNPP 125

Query: 74  MHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNE 133
           M  N     VIFDT   N  + +   +G+F C VPG Y+F+  V   +Q E  L I+ + 
Sbjct: 126 MGGN----VVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQV--LSQWEICLSIVSSS 179

Query: 134 EEVV---ILFAQVGDRSIMQ--SQSLMLELREQDQVWV-------RLYKGERENAIFS 179
              V   + F    ++ + Q  S  ++L+L++ DQVWV        +Y+G   +++FS
Sbjct: 180 RGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHIYQGSEADSVFS 237



 Score = 36.6 bits (83), Expect = 0.014
 Identities = 17/34 (50%), Positives = 20/34 (58%)

Query: 25 RGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
          R   GK G+ G  G RG  G KG++G  GAPG R
Sbjct: 27 RAPDGKKGEAGRPGRRGRPGLKGEQGEPGAPGIR 60


>gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo
           sapiens]
          Length = 333

 Score = 85.5 bits (210), Expect = 3e-17
 Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 2/177 (1%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHS 76
           G  G  G +G  G  G  G  G RG  G KG +G  G  GE      +AF+VG       
Sbjct: 155 GPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKF 214

Query: 77  NHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEV 136
                 + FD    N ++H++   GKF C++ G+Y+F+ ++  ++ +   + ++KN  ++
Sbjct: 215 PSSDMPIKFDKILYNEFNHYDTAAGKFTCHIAGVYYFTYHITVFS-RNVQVSLVKNGVKI 273

Query: 137 VILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 193
           +             S  ++L+L+  D+VW+++  GER N +F++E D   TF+G+L+
Sbjct: 274 LHTKDAYMSSEDQASGGIVLQLKLGDEVWLQVTGGERFNGLFADE-DDDTTFTGFLL 329



 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 6/47 (12%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSA------GARGHTGPKGQKGSMGAPG 56
           KG KGD+G RG  GK+G  G A      G RG TGP+GQKG+ G  G
Sbjct: 85  KGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVG 131



 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 9/51 (17%)

Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGP---------KGQKGSMGAPGE 57
          KG+KGD G+ G  G  GK G++G +G  G          KG +GS G+PG+
Sbjct: 49 KGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGK 99



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 6/48 (12%)

Query: 17  GEKGDRGDRGLQGKY------GKTGSAGARGHTGPKGQKGSMGAPGER 58
           G  G++G+RG  GK       G  GS G+ G  GPKG  G MG  G R
Sbjct: 68  GTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLR 115



 Score = 37.7 bits (86), Expect = 0.006
 Identities = 17/40 (42%), Positives = 21/40 (52%)

Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
          G KGD+GD G  G+ G  G  G  G  G +G  G + A G
Sbjct: 47 GAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKG 86



 Score = 37.0 bits (84), Expect = 0.011
 Identities = 16/37 (43%), Positives = 24/37 (64%)

Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMG 53
          G  G +GD+G  G+ G+ GS G  G +G KG++G+ G
Sbjct: 44 GRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADG 80



 Score = 35.0 bits (79), Expect = 0.042
 Identities = 17/45 (37%), Positives = 24/45 (53%)

Query: 13 TILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
          T  +G  G  G+ G  G  G+ G  GA+G  G  G+ G  G+PG+
Sbjct: 22 TCRQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGK 66


>gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo
           sapiens]
          Length = 333

 Score = 85.1 bits (209), Expect = 4e-17
 Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 2/177 (1%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHS 76
           G  G  G +G  G  G  G  G RG  G KG +G  G  GE      +AF+VG       
Sbjct: 155 GPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKF 214

Query: 77  NHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEV 136
                 + FD    N ++H++   GKF C++ G+Y+F+ ++  ++ +   + ++KN  ++
Sbjct: 215 PSSDVPIKFDKILYNEFNHYDTAVGKFTCHIAGVYYFTYHITVFS-RNVQVSLVKNGVKI 273

Query: 137 VILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 193
           +             S S++L+L+  D++W+++  GER N +F++E D   TF+G+L+
Sbjct: 274 LHTRDAYVSSEDQASGSIVLQLKLGDEMWLQVTGGERFNGLFADE-DDDTTFTGFLL 329



 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 6/47 (12%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSA------GARGHTGPKGQKGSMGAPG 56
           KG KGD+G RG  GK+G  G A      G RG TGP+GQKG+ G  G
Sbjct: 85  KGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVG 131



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 9/51 (17%)

Query: 16 KGEKGDRGDRGLQGKYGKTGSAGARGHTGP---------KGQKGSMGAPGE 57
          KG+KGD G+ G  G  GK G++G +G  G          KG +GS G+PG+
Sbjct: 49 KGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGK 99



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 6/48 (12%)

Query: 17  GEKGDRGDRGLQGKY------GKTGSAGARGHTGPKGQKGSMGAPGER 58
           G  G++G+RG  GK       G  GS G+ G  GPKG  G MG  G R
Sbjct: 68  GTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLR 115



 Score = 35.0 bits (79), Expect = 0.042
 Identities = 17/45 (37%), Positives = 24/45 (53%)

Query: 13 TILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
          T  +G  G  G+ G  G  G+ G  GA+G  G  G+ G  G+PG+
Sbjct: 22 TCRQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSPGK 66



 Score = 35.0 bits (79), Expect = 0.042
 Identities = 16/37 (43%), Positives = 23/37 (62%)

Query: 17 GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMG 53
          G  G +GD+G  G+ G  GS G  G +G KG++G+ G
Sbjct: 44 GRDGAKGDKGDAGEPGCPGSPGKDGTSGEKGERGADG 80


>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
           sapiens]
          Length = 330

 Score = 85.1 bits (209), Expect = 4e-17
 Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 30/202 (14%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER------------------ 58
           GE+G  G  G +GK G  G AGA G  GP+G KG  G PG+                   
Sbjct: 124 GEEGPPGRTGNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLP 183

Query: 59  ----CKSHY--AAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYF 112
               C S +  +AFSV   K          + FD   +N   H+N  +GKF C VPG+Y+
Sbjct: 184 GPCSCGSGHTKSAFSVAVTKSYPRERL--PIKFDKILMNEGGHYNASSGKFVCGVPGIYY 241

Query: 113 FSLNVHTWNQKETYLHIMKNEEEVVILF-AQVGDRSIMQSQSLMLELREQDQVWVRLYKG 171
           F+ ++ T   K   + ++ N +  +  F A  G+  +  S S +L L++ D+VW++++  
Sbjct: 242 FTYDI-TLANKHLAIGLVHNGQYRIRTFDANTGNHDV-ASGSTILALKQGDEVWLQIFYS 299

Query: 172 ERENAIFSEELDTYITFSGYLV 193
           E +N +F +   T   F+G+L+
Sbjct: 300 E-QNGLFYDPYWTDSLFTGFLI 320



 Score = 36.2 bits (82), Expect = 0.019
 Identities = 16/40 (40%), Positives = 19/40 (47%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           G  G  G  G+ G+ G  G  G  GH G +G  G  G PG
Sbjct: 91  GPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPG 130



 Score = 27.7 bits (60), Expect = 6.7
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 32  GKTGSAGARGHTGPKGQKGSMGAPGE 57
           G  G  G  G  GP G  G MG PG+
Sbjct: 85  GPQGPPGPPGAPGPSGMMGRMGFPGK 110


>gi|14149712 C1q and tumor necrosis factor related protein 5
           precursor [Homo sapiens]
          Length = 243

 Score = 84.7 bits (208), Expect = 5e-17
 Identities = 59/179 (32%), Positives = 83/179 (46%), Gaps = 11/179 (6%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHS 76
           GEKG+ G  GL G  G  G  G  G  GP G  G    P        +AFS  R +    
Sbjct: 63  GEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPR------SAFSAKRSESRVP 116

Query: 77  NHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEV 136
                 + FD   VN   H++  TGKF C VPG+Y+F+++  T  +      ++KN E +
Sbjct: 117 PPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHA-TVYRASLQFDLVKNGESI 175

Query: 137 VILFAQVG--DRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 193
              F   G   +    S   M+ L  +DQVWV++  G+      S + D+  TFSG+LV
Sbjct: 176 ASFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDS--TFSGFLV 232


>gi|122937273 hypothetical protein LOC131149 [Homo sapiens]
          Length = 477

 Score = 81.6 bits (200), Expect = 4e-16
 Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 8/182 (4%)

Query: 15  LKGEKGDRGDRGL---QGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRK 71
           +KGEKG+ G  GL    G  G  G+ G RG TG KG +G  G+ GE  +   +AFS G  
Sbjct: 291 IKGEKGELGPPGLLGPTGPKGDIGNKGVRGPTGKKGSRGFKGSKGELARVPRSAFSAGLS 350

Query: 72  KPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMK 131
           KP    +    + F+    N   +++  TGKF C +PG Y FS ++    +      + +
Sbjct: 351 KPFPPPNI--PIKFEKILYNDQGNYSPVTGKFNCSIPGTYVFSYHITVRGRPARISLVAQ 408

Query: 132 NEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGY 191
           N+++        G      S  ++L+L   DQVW+ + K    N ++    D  I F+G+
Sbjct: 409 NKKQFKSRETLYGQEIDQASLLVILKLSAGDQVWLEVSKD--WNGVYVSAEDDSI-FTGF 465

Query: 192 LV 193
           L+
Sbjct: 466 LL 467



 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 23/41 (56%), Positives = 28/41 (68%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           KGEKG +G+RG QG  G  G  GA+G  GPKG KG++G  G
Sbjct: 148 KGEKGLKGERGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGG 188



 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 6/49 (12%)

Query: 15  LKGEKGDRGD------RGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
           +KG+KG +GD      +G +G  G  GS G  G  G KG+KG MG  GE
Sbjct: 189 VKGQKGSKGDTCGNCTKGEKGDQGAMGSPGLHGGPGAKGEKGEMGEKGE 237



 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
           KGEKGD+G  G  G +G  G+ G +G  G KG+ G  G  G+
Sbjct: 205 KGEKGDQGAMGSPGLHGGPGAKGEKGEMGEKGEMGDKGCCGD 246



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
           G KG++G+ G +G+ G  G  G  G  G KGQKG  G  GE+
Sbjct: 224 GAKGEKGEMGEKGEMGDKGCCGDSGERGGKGQKGEGGMKGEK 265



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 6/47 (12%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSAGARGHT------GPKGQKGSMGAPG 56
           +GE G +GD+G  G  G  G  G++G T      G KG +G+MG+PG
Sbjct: 172 QGEPGPKGDKGNIGLGGVKGQKGSKGDTCGNCTKGEKGDQGAMGSPG 218



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 19/42 (45%), Positives = 21/42 (50%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
           GE G  G +G  G  G  G  G  G  GP+G KG  G  GER
Sbjct: 116 GETGQPGPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGER 157



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 18/40 (45%), Positives = 22/40 (55%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           G KG+ G+ G+ G  G  G  G RG+ G KG KG  G  G
Sbjct: 122 GPKGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQG 161



 Score = 38.5 bits (88), Expect = 0.004
 Identities = 18/41 (43%), Positives = 22/41 (53%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           KGE G+ G  G  G  G  G  G +G  G KG++G  G PG
Sbjct: 124 KGEAGNLGIPGPPGVVGPQGPRGYKGEKGLKGERGDQGVPG 164


>gi|58801559 complement component 1, q subcomponent-like 3 [Homo
           sapiens]
          Length = 255

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 29/203 (14%)

Query: 13  TILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMG---------APGERCKSHY 63
           T ++G KG+ G  G  G  G  G  G  G  GP G+KG  G         APG       
Sbjct: 57  TFIQGPKGEAGRPGKAGPRGPPGEPGPPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGAI 116

Query: 64  AA----------FSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFF 113
           +A          F  G K+    +  Y+ + FD    NL +H++  TGKF C +PG+YFF
Sbjct: 117 SAATYSTVPKIAFYAGLKR---QHEGYEVLKFDDVVTNLGNHYDPTTGKFTCSIPGIYFF 173

Query: 114 SLNV--HTWNQKETYLHIMKNEEEVVILFAQVGDRSI-MQSQSLMLELREQDQVWVRLYK 170
           + +V     +    +  + KN +      AQ  D++    S S++L L   D+V+++L  
Sbjct: 174 TYHVLMRGGDGTSMWADLCKNNQVRASAIAQDADQNYDYASNSVVLHLEPGDEVYIKLDG 233

Query: 171 GERENAIFSEELDTYITFSGYLV 193
           G+          + Y TFSG+++
Sbjct: 234 GKAHGG----NNNKYSTFSGFII 252


>gi|148233912 C1q and tumor necrosis factor related protein 4 [Homo
           sapiens]
          Length = 329

 Score = 78.2 bits (191), Expect = 4e-15
 Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 9/137 (6%)

Query: 64  AAFSVGRKKPMHSNHY-----YQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVH 118
           +AFS  R + +  +       +Q + FDTEFVN+   F+   G F C +PG YFFS  + 
Sbjct: 177 SAFSAARTRSLVGSDAGPGPRHQPLAFDTEFVNIGGDFDAAAGVFRCRLPGAYFFSFTLG 236

Query: 119 TWNQKETYLHIMKNEEEVVILFAQVG--DRSIMQSQSLMLELREQDQVWVRLYKGERENA 176
              +K   + +MKN +EV  +    G   R  MQSQS+ML LR  D VW+  +  +   A
Sbjct: 237 KLPRKTLSVKLMKNRDEVQAMIYDDGASRRREMQSQSVMLALRRGDAVWLLSHDHDGYGA 296

Query: 177 IFSEELDTYITFSGYLV 193
             +     YITFSG+LV
Sbjct: 297 YSNH--GKYITFSGFLV 311



 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 53/156 (33%), Positives = 72/156 (46%), Gaps = 9/156 (5%)

Query: 41  GHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFT 100
           G  GP         PG       +AFS  R  P+        V FD  +VN+   F++ T
Sbjct: 7   GLLGPAACWALGPTPGPGSSELRSAFSAARTTPLEGTSE-MAVTFDKVYVNIGGDFDVAT 65

Query: 101 GKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQ---SQSLMLE 157
           G+F C VPG YFFS        K   + +++N +EV  L      R   +   SQS ML+
Sbjct: 66  GQFRCRVPGAYFFSFTAGKAPHKSLSVMLVRNRDEVQALAFDEQRRPGARRAASQSAMLQ 125

Query: 158 LREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 193
           L   D VW+RL+ G  + A+ +       TFSGYLV
Sbjct: 126 LDYGDTVWLRLH-GAPQYALGAPG----ATFSGYLV 156


>gi|13569919 C1q and tumor necrosis factor related protein 3 isoform
           a [Homo sapiens]
          Length = 246

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 22/195 (11%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKP-- 73
           +G  G  G  G+ G +G  G+ GA GH G KG+KG  G  G R +         +  P  
Sbjct: 53  QGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGI 112

Query: 74  -------------MHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 120
                         H ++    +IF +   N+ + F++ TG+F   V G+YFF+ ++   
Sbjct: 113 PPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKH 172

Query: 121 NQ-KETYLHIMKNEEEVVILFA-QVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIF 178
              +E Y+++M N   V  +++ ++  +S   S   +L+L + D+VW+R+      N   
Sbjct: 173 EDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM-----GNGAL 227

Query: 179 SEELDTYITFSGYLV 193
             +   + TF+G+L+
Sbjct: 228 HGDHQRFSTFAGFLL 242


>gi|62739183 C1q and tumor necrosis factor related protein 3 isoform
           b [Homo sapiens]
          Length = 319

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 22/195 (11%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKP-- 73
           +G  G  G  G+ G +G  G+ GA GH G KG+KG  G  G R +         +  P  
Sbjct: 126 QGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGI 185

Query: 74  -------------MHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTW 120
                         H ++    +IF +   N+ + F++ TG+F   V G+YFF+ ++   
Sbjct: 186 PPELQIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKH 245

Query: 121 NQ-KETYLHIMKNEEEVVILFA-QVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIF 178
              +E Y+++M N   V  +++ ++  +S   S   +L+L + D+VW+R+      N   
Sbjct: 246 EDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM-----GNGAL 300

Query: 179 SEELDTYITFSGYLV 193
             +   + TF+G+L+
Sbjct: 301 HGDHQRFSTFAGFLL 315


>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
           sapiens]
          Length = 258

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 26/200 (13%)

Query: 13  TILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER-----------CKS 61
           T+++G +G  G  G  G  G  G  G  G  GP G+KG  G PG               +
Sbjct: 63  TLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTA 122

Query: 62  HY-----AAFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLN 116
            Y      AF  G K P   +  Y+ + FD    NL ++++  +GKF C +PG YFF+ +
Sbjct: 123 TYTTVPRVAFYAGLKNP---HEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYH 179

Query: 117 V--HTWNQKETYLHIMKNEEEVVILFAQVGDRSI-MQSQSLMLELREQDQVWVRLYKGER 173
           V     +    +  + KN +      AQ  D++    S S++L L   D+V+++L  G+ 
Sbjct: 180 VLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGKA 239

Query: 174 ENAIFSEELDTYITFSGYLV 193
                    + Y TFSG+++
Sbjct: 240 HGG----NSNKYSTFSGFII 255


>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
           sapiens]
          Length = 287

 Score = 74.3 bits (181), Expect = 6e-14
 Identities = 63/218 (28%), Positives = 91/218 (41%), Gaps = 46/218 (21%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG------------------ 56
           ++G KGD G  G  G  G  G  G  G  GP G+KG  G PG                  
Sbjct: 74  IQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVG 133

Query: 57  -----------ERCKSHYAAFS-------VGRKKPMHSNHYYQTVIFDTEFVNLYDHFNM 98
                      E   +  A FS       VG K P      Y+ + FD    NL +H++ 
Sbjct: 134 GGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEG---YEVLKFDDVVTNLGNHYDP 190

Query: 99  FTGKFYCYVPGLYFFSLNV--HTWNQKETYLHIMKNEEEVVILFAQVGDRSI-MQSQSLM 155
            TGKF C V G+YFF+ ++     +    +  + KN +      AQ  D++    S S++
Sbjct: 191 TTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVV 250

Query: 156 LELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 193
           L L   D+V+V+L  G+          + Y TFSG+L+
Sbjct: 251 LHLDSGDEVYVKLDGGKAHGG----NNNKYSTFSGFLL 284


>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
           sapiens]
          Length = 238

 Score = 73.9 bits (180), Expect = 8e-14
 Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 18/188 (9%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE-----RCKSHYA---AFSV 68
           G KG+ G RG  G  G  G  G RG  G  G+ G  G PG         + Y    AF  
Sbjct: 55  GAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGPGPGGVAPAAGYVPRIAFYA 114

Query: 69  GRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNV--HTWNQKETY 126
           G ++P   +  Y+ + FD    N+ + +   +GKF C +PG+YFF+ +V     +    +
Sbjct: 115 GLRRP---HEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMW 171

Query: 127 LHIMKNEEEVVILFAQVGDRSI-MQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTY 185
             +MKN +      AQ  D++    S S++L L   D+V+++L  G+    +     + Y
Sbjct: 172 ADLMKNGQVRASAIAQDADQNYDYASNSVILHLDVGDEVFIKLDGGK----VHGGNTNKY 227

Query: 186 ITFSGYLV 193
            TFSG+++
Sbjct: 228 STFSGFII 235


>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
          Length = 680

 Score = 71.6 bits (174), Expect = 4e-13
 Identities = 61/217 (28%), Positives = 90/217 (41%), Gaps = 43/217 (19%)

Query: 17  GEKGDRGD-----------RGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE--RCKSHY 63
           G KGD G            +GL G  G  G  G RGH+G  G  G  G PG   +     
Sbjct: 464 GSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRGHSGEPGLPGPPGPPGPPGQAVMPE 523

Query: 64  AAFSVGRKKPMHSNHYYQ-------------TVI-------------FDTEFVNLYDHFN 97
                G++  +                    TVI             FD    N   H++
Sbjct: 524 GFIKAGQRPSLSGTPLVSANQGVTGMPVSAFTVILSKAYPAIGTPIPFDKILYNRQQHYD 583

Query: 98  MFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQ-SQSLML 156
             TG F C +PG+Y+FS +VH       ++ + KN   V+  + +     + Q S S ++
Sbjct: 584 PRTGIFTCQIPGIYYFSYHVHV-KGTHVWVGLYKNGTPVMYTYDEYTKGYLDQASGSAII 642

Query: 157 ELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLV 193
           +L E DQVW++L   E  N ++S E   + +FSG+LV
Sbjct: 643 DLTENDQVWLQLPNAE-SNGLYSSEY-VHSSFSGFLV 677



 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 22/42 (52%), Positives = 25/42 (59%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
           G KG++G  GL GK G TG  G  G  GPKG  GS G PG +
Sbjct: 320 GAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPK 361



 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 20/42 (47%), Positives = 27/42 (64%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
           +G KG  G  GL G  G+TG AG  G+ G KG++GS G+ G+
Sbjct: 346 QGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGK 387



 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 19/43 (44%), Positives = 23/43 (53%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
           KG+ G  G  GL G  G  G+ G  GH G  G +G+ G PG R
Sbjct: 409 KGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTR 451



 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 21/42 (50%), Positives = 23/42 (54%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           L G KGD G  G  G  G  G AGA+G  G  G+ G  GAPG
Sbjct: 405 LPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPG 446



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           G +G  G+RG +G  GK G+AGA G  G  G KG  GAPG
Sbjct: 250 GPQGPPGERGPEG-IGKPGAAGAPGQPGIPGTKGLPGAPG 288



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 20/44 (45%), Positives = 24/44 (54%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
           L G  G+ G +G +G  G  G  G +G TGP G  G  GA GER
Sbjct: 336 LTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGER 379



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 18/39 (46%), Positives = 21/39 (53%)

Query: 20  GDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
           G RG+ G+ G+ G  G  G  G  GP G  G  G PGER
Sbjct: 220 GKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGER 258



 Score = 38.5 bits (88), Expect = 0.004
 Identities = 19/40 (47%), Positives = 20/40 (50%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           GE G RG  G+ G  G  G  G  G  G KG  GS G PG
Sbjct: 437 GEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPGPPG 476



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 14/68 (20%)

Query: 5   TAVPQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGP--------------KGQKG 50
           +AV +  +  L G+ G+RG  G +G  G  G  G RG  GP               GQ+G
Sbjct: 103 SAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQG 162

Query: 51  SMGAPGER 58
             GAPG R
Sbjct: 163 PTGAPGPR 170



 Score = 37.4 bits (85), Expect = 0.008
 Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 5/45 (11%)

Query: 17  GEKGDRGDRGLQGK-----YGKTGSAGARGHTGPKGQKGSMGAPG 56
           GEKG  G  G+ G+     YG  G  G RG  GP+G  G  G PG
Sbjct: 174 GEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPG 218



 Score = 37.4 bits (85), Expect = 0.008
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 5/46 (10%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPK-----GQKGSMGAPGE 57
           G+ G +GDRG  G+ G  G  G +G  G +     G+ G+ GAPG+
Sbjct: 229 GQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQ 274



 Score = 37.0 bits (84), Expect = 0.011
 Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 5/47 (10%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSM-----GAPGER 58
           G+ G +G  G  G  G  G  GA G  G  GQKG M     G PGER
Sbjct: 156 GKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGER 202



 Score = 36.6 bits (83), Expect = 0.014
 Identities = 18/41 (43%), Positives = 21/41 (51%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
           G  G +G+RG  G  GK G  G  G  GPKG  G  G  G+
Sbjct: 371 GYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGD 411



 Score = 36.6 bits (83), Expect = 0.014
 Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 3/44 (6%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSAGARGH---TGPKGQKGSMGAPG 56
           KGE+G  G  G  G  GK G  G +G+    GPKG  G  G PG
Sbjct: 376 KGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPG 419



 Score = 35.4 bits (80), Expect = 0.032
 Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 25 RGLQGKYGKTGSAGARGHTGPKGQKG--SMGAPG 56
          RG QG  G  G AG RGH GP G  G    G+PG
Sbjct: 56 RGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPG 89



 Score = 35.4 bits (80), Expect = 0.032
 Identities = 18/40 (45%), Positives = 19/40 (47%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           G KG+RG  G  GK G  G  G  G  G  G  G  G PG
Sbjct: 374 GAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPG 413



 Score = 34.7 bits (78), Expect = 0.055
 Identities = 17/40 (42%), Positives = 20/40 (50%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           G  G +G+ GL G  G  G  G  G  GP G  G+ G PG
Sbjct: 395 GLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPG 434



 Score = 34.3 bits (77), Expect = 0.072
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)

Query: 15  LKGEKGDRGDRGLQGK-----YGKTGSAGARGHTGPKGQKGSMGAPGER 58
           + G KG  G  G+ G      +GK G  G +G  GP G  G  GA GE+
Sbjct: 277 IPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQ 325



 Score = 34.3 bits (77), Expect = 0.072
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 23  GDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
           G  GL G  G+ G AG  G  G KG++G  G PG+
Sbjct: 299 GKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGK 333



 Score = 34.3 bits (77), Expect = 0.072
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           + G  G+ G RG  G  G  G  G  G  G  G KG  G+PG
Sbjct: 432 MPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPG 473



 Score = 33.5 bits (75), Expect = 0.12
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           +GE G  G  G++G  G  G  G  G  GP+G  G  G  G
Sbjct: 222 RGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEG 262



 Score = 33.5 bits (75), Expect = 0.12
 Identities = 19/43 (44%), Positives = 21/43 (48%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
           L G KG+ G  G +G  G  G  G  G  GP G KG  G  GE
Sbjct: 396 LDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGE 438



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 16/40 (40%), Positives = 21/40 (52%)

Query: 26  GLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAA 65
           G  G+ G TG+ G RG  G KG  G  G  G++ +  Y A
Sbjct: 156 GKPGQQGPTGAPGPRGFPGEKGAPGVPGMNGQKGEMGYGA 195



 Score = 32.0 bits (71), Expect = 0.36
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           G+ G  G +G +G  G  G  GA+G  GP G  G  G  G
Sbjct: 299 GKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTG 338



 Score = 32.0 bits (71), Expect = 0.36
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           L G KG+RG  GL G     G+ G +G  G  G+ G  G PG
Sbjct: 303 LPGLKGERGPAGLPGG---PGAKGEQGPAGLPGKPGLTGPPG 341



 Score = 31.6 bits (70), Expect = 0.47
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
           G  G +G  G  G+ G  G+ G  G  GP G  G  G PG +
Sbjct: 425 GPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSK 466



 Score = 29.3 bits (64), Expect = 2.3
 Identities = 17/43 (39%), Positives = 18/43 (41%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
           KG  G  G +G  G  G  G  G  G  G KG  G  G  G R
Sbjct: 400 KGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPR 442



 Score = 28.5 bits (62), Expect = 3.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 32 GKTGSAGARGHTGPKGQKGSMGAPGE 57
          G+ G+ G  G  GP+G  G  G PG+
Sbjct: 57 GEQGTPGPPGPAGPRGHPGPSGPPGK 82


>gi|87298828 complement component 1, q subcomponent, B chain
           precursor [Homo sapiens]
          Length = 253

 Score = 71.2 bits (173), Expect = 5e-13
 Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 22/182 (12%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKS------HYAAFSV 68
           L G+ G+ G++G  G  G  G  G +G  GPKG  G+ GAPG + +S         AFS 
Sbjct: 67  LAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKATQKIAFSA 126

Query: 69  GR--KKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETY 126
            R    P+  +   QT+ FD    N+ +++   +GKF C VPGLY+F+   H  ++    
Sbjct: 127 TRTINVPLRRD---QTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFT--YHASSRGNLC 181

Query: 127 LHIMKNEE--EVVILFAQVGDRSI-MQSQSLMLELREQDQVWVR------LYKGERENAI 177
           +++M+  E  + V+ F      +  + +  ++L+L + + V+++      L   E  N+I
Sbjct: 182 VNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEGANSI 241

Query: 178 FS 179
           FS
Sbjct: 242 FS 243


>gi|56786155 complement component 1, q subcomponent, C chain
           precursor [Homo sapiens]
          Length = 245

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE--RCKSHY-AAFSVGRK 71
           ++G KG +G+ GL G  GK G  G  G  G  G  G  G PGE  R K  + + F+V R+
Sbjct: 68  IRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYKQKFQSVFTVTRQ 127

Query: 72  --KPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHI 129
             +P   N     + F+    N    ++  TGKF C VPGLY+F    H  +     + +
Sbjct: 128 THQPPAPN---SLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFV--YHASHTANLCVLL 182

Query: 130 MKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWV 166
            ++  +VV         + + S  ++L L+  ++VW+
Sbjct: 183 YRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWL 219


>gi|166235903 complement component 1, q subcomponent, C chain
           precursor [Homo sapiens]
          Length = 245

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 10/157 (6%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE--RCKSHY-AAFSVGRK 71
           ++G KG +G+ GL G  GK G  G  G  G  G  G  G PGE  R K  + + F+V R+
Sbjct: 68  IRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYKQKFQSVFTVTRQ 127

Query: 72  --KPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHI 129
             +P   N     + F+    N    ++  TGKF C VPGLY+F    H  +     + +
Sbjct: 128 THQPPAPN---SLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFV--YHASHTANLCVLL 182

Query: 130 MKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWV 166
            ++  +VV         + + S  ++L L+  ++VW+
Sbjct: 183 YRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWL 219


>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
          Length = 703

 Score = 63.9 bits (154), Expect = 8e-11
 Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 35/210 (16%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRK---- 71
           +G  G+ G  G  G  G  GS G  G  GP G  G  GAPG   ++  A   +       
Sbjct: 494 EGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEG 553

Query: 72  -------KPM--------HSNHYYQTVI------------FDTEFVNLYDHFNMFTGKFY 104
                  KP         H+   +  V+            FD    N +  +N  TG F 
Sbjct: 554 AVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFT 613

Query: 105 CYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQ-SQSLMLELREQDQ 163
           C V G+Y+F+ +VH       ++ + KN       + +     + Q S   +L+LR  DQ
Sbjct: 614 CPVGGVYYFAYHVHV-KGTNVWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQ 672

Query: 164 VWVRLYKGERENAIFSEELDTYITFSGYLV 193
           VWV++   ++ N ++S E   + +FSG+L+
Sbjct: 673 VWVQM-PSDQANGLYSTEY-IHSSFSGFLL 700



 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 24/53 (45%), Positives = 27/53 (50%), Gaps = 9/53 (16%)

Query: 15  LKGEKGDR---------GDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
           L G KGDR         GDRG  G+ G+ G  G +G  GP G  GS G PG R
Sbjct: 320 LPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRR 372



 Score = 41.6 bits (96), Expect = 4e-04
 Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 3/43 (6%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGA---RGHTGPKGQKGSMGAPG 56
           GE G++G +GL G  G  GSAG    RG  GPKG+ G  G PG
Sbjct: 346 GEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPG 388



 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 20/44 (45%), Positives = 22/44 (50%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
           L G +G  G +G  G  G  G  G RG  GP G  G  G PGER
Sbjct: 368 LPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGER 411



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           L+GE G RGD+GL+G  G  G  G  G T P G+ G+ G PG
Sbjct: 142 LRGEPGIRGDQGLRGPPGPPGLPGPSGITIP-GKPGAQGVPG 182



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 19/40 (47%), Positives = 21/40 (52%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           G +GD+G  GL GK G  G  G  G  GP G  G  G PG
Sbjct: 391 GIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPG 430



 Score = 38.5 bits (88), Expect = 0.004
 Identities = 19/43 (44%), Positives = 23/43 (53%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
           L G  G  G  G +G+ G TG  G  G  G  GQKG +G PG+
Sbjct: 413 LPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQ 455



 Score = 38.5 bits (88), Expect = 0.004
 Identities = 19/43 (44%), Positives = 23/43 (53%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
           L G+ G RG  G+ G  G  G  G +G  G KG+ G  G PGE
Sbjct: 452 LPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGE 494



 Score = 37.4 bits (85), Expect = 0.008
 Identities = 18/40 (45%), Positives = 21/40 (52%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           G  G +GD GL G+ G  G +G  G  GP G  G  G PG
Sbjct: 442 GALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPG 481



 Score = 36.6 bits (83), Expect = 0.014
 Identities = 17/37 (45%), Positives = 19/37 (51%)

Query: 20  GDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           G  G  GL GK G  G  G RG  G +G +G  G PG
Sbjct: 123 GKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPG 159



 Score = 35.8 bits (81), Expect = 0.025
 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 11/54 (20%)

Query: 16  KGEKGDRGDRGLQGK--YGKTGSAGARGHTGP---------KGQKGSMGAPGER 58
           KGE G RG  GL G   YG  G  G +G  GP         +G+ G  G PGE+
Sbjct: 298 KGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQ 351



 Score = 35.4 bits (80), Expect = 0.032
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
           L G+ G  G  G   + GK G  G  G  GP GQ G  G PG R
Sbjct: 107 LHGQPGPAGPPGFS-RMGKAGPPGLPGKVGPPGQPGLRGEPGIR 149



 Score = 35.4 bits (80), Expect = 0.032
 Identities = 18/41 (43%), Positives = 22/41 (53%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGE 57
           G+KGD G  G  G  G +G  G +G  GP G +G  G  GE
Sbjct: 445 GQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGE 485



 Score = 35.0 bits (79), Expect = 0.042
 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           L G  GD+G+ G  G  G  G  GA G  GP G  G +G PG
Sbjct: 244 LPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDG-VGVPG 284



 Score = 35.0 bits (79), Expect = 0.042
 Identities = 18/41 (43%), Positives = 21/41 (51%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           KG+ G  G  GL+G  G  G  G  G  GP+G  G  G PG
Sbjct: 447 KGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPG 487



 Score = 34.7 bits (78), Expect = 0.055
 Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           +GE G  GDRGL+G  G  G  G  G  G  G  G  G PG
Sbjct: 193 QGEPGPPGDRGLKGDNG-VGQPGLPGAPGQGGAPGPPGLPG 232



 Score = 34.7 bits (78), Expect = 0.055
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 14/56 (25%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAG--------------ARGHTGPKGQKGSMGAPGER 58
           G+KG+ G  G+ G  G+ G+ G              A G  GP+G  G+ G PG R
Sbjct: 249 GDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTR 304



 Score = 33.5 bits (75), Expect = 0.12
 Identities = 17/39 (43%), Positives = 20/39 (51%)

Query: 15  LKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMG 53
           L G+ G  G  GL+G+ G  G  G RG  GP G  G  G
Sbjct: 130 LPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSG 168



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 17/42 (40%), Positives = 19/42 (45%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGER 58
           G  G  G +G  G  G+ G  G  G  G KG  G  G PG R
Sbjct: 418 GPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLR 459



 Score = 32.7 bits (73), Expect = 0.21
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 17  GEKGDRGDRGLQGK--YGKTGSAGARGHTGPKGQKGSMGAPGER 58
           G+ G  G  GL G    GK G  G  G  G KG+ G  G PG R
Sbjct: 220 GQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPR 263



 Score = 31.6 bits (70), Expect = 0.47
 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPK-----GQKGSMGAPGE 57
           G +G  G  G QG+ G  G  G  G  G K     GQ G  GAPG+
Sbjct: 176 GAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQ 221



 Score = 31.6 bits (70), Expect = 0.47
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 17  GEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           G KG  G  G+ G  G  G  G +G +G KG+ G+ G PG
Sbjct: 270 GPKGPPGVDGV-GVPGAAGLPGPQGPSGAKGEPGTRGPPG 308



 Score = 30.4 bits (67), Expect = 1.0
 Identities = 17/41 (41%), Positives = 18/41 (43%)

Query: 16  KGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           KGE G  G  G  G  G  G  G  G  G  G +G  G PG
Sbjct: 426 KGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPG 466



 Score = 29.3 bits (64), Expect = 2.3
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 17  GEKGDRGDRGL--QGKYGKTGSAGARGHTGPKGQKGSMGAPG 56
           G  G  G  GL   G  G  G+ G +G +GP G  G  G PG
Sbjct: 226 GPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPG 267



 Score = 28.1 bits (61), Expect = 5.1
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)

Query: 27  LQGKYGKTGSAGARGHTGPKGQKG--SMGAPG 56
           L+G+ G  G  G RG  GP G  G   MG PG
Sbjct: 75  LKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPG 106


>gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens]
          Length = 1127

 Score = 62.4 bits (150), Expect = 2e-10
 Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 9/132 (6%)

Query: 65   AFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLN-VHTWNQK 123
            AFS  R   +      Q ++FD    NL + F++  G+F C V G Y F  + +      
Sbjct: 999  AFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNV 1058

Query: 124  ETYLHIMKNEEEVVILFAQVG--DRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEE 181
              Y+++MKNEE +V  +A  G  D     + ++ L+L + DQ+W+RL++G    AI+   
Sbjct: 1059 PLYVNLMKNEEVLVSAYANDGAPDHETASNHAI-LQLFQGDQIWLRLHRG----AIYGSS 1113

Query: 182  LDTYITFSGYLV 193
               Y TFSGYL+
Sbjct: 1114 W-KYSTFSGYLL 1124


>gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens]
          Length = 793

 Score = 62.4 bits (150), Expect = 2e-10
 Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 9/132 (6%)

Query: 65  AFSVGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLN-VHTWNQK 123
           AFS  R   +      Q ++FD    NL + F++  G+F C V G Y F  + +      
Sbjct: 665 AFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNV 724

Query: 124 ETYLHIMKNEEEVVILFAQVG--DRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEE 181
             Y+++MKNEE +V  +A  G  D     + ++ L+L + DQ+W+RL++G    AI+   
Sbjct: 725 PLYVNLMKNEEVLVSAYANDGAPDHETASNHAI-LQLFQGDQIWLRLHRG----AIYGSS 779

Query: 182 LDTYITFSGYLV 193
              Y TFSGYL+
Sbjct: 780 W-KYSTFSGYLL 790


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.137    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,922,787
Number of Sequences: 37866
Number of extensions: 359569
Number of successful extensions: 11015
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1104
Number of HSP's gapped (non-prelim): 7307
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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