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Search of human proteins with 38348382
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38348382 spermatogenesis associated 21 [Homo sapiens]
(469 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38348382 spermatogenesis associated 21 [Homo sapiens] 947 0.0
gi|222418696 EF-hand calcium binding domain 3 isoform a [Homo sa... 82 1e-15
gi|27735113 EF-hand calcium binding domain 3 isoform b [Homo sap... 82 1e-15
gi|55749531 splicing factor 3B subunit 2 [Homo sapiens] 52 2e-06
gi|4757974 centrin 1 [Homo sapiens] 50 4e-06
gi|4757902 caltractin [Homo sapiens] 49 1e-05
gi|58218968 calmodulin 3 [Homo sapiens] 49 1e-05
gi|4502549 calmodulin 2 [Homo sapiens] 49 1e-05
gi|5901912 calmodulin 1 [Homo sapiens] 49 1e-05
gi|4503519 eukaryotic translation initiation factor 3, subunit 5... 47 4e-05
gi|4507617 fast skeletal muscle troponin C [Homo sapiens] 47 4e-05
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 47 5e-05
gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens] 46 6e-05
gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens] 46 6e-05
gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens] 46 6e-05
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 45 1e-04
gi|4507615 troponin C, slow [Homo sapiens] 45 1e-04
gi|50897266 calmodulin-like 6 [Homo sapiens] 45 1e-04
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 45 2e-04
gi|4885111 calmodulin-like 3 [Homo sapiens] 45 2e-04
gi|4505101 microtubule-associated protein 7 [Homo sapiens] 45 2e-04
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 45 2e-04
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 44 2e-04
gi|33186895 selenoprotein V [Homo sapiens] 44 2e-04
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 44 3e-04
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 44 3e-04
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 44 3e-04
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 44 3e-04
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 44 3e-04
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 44 3e-04
>gi|38348382 spermatogenesis associated 21 [Homo sapiens]
Length = 469
Score = 947 bits (2449), Expect = 0.0
Identities = 469/469 (100%), Positives = 469/469 (100%)
Query: 1 MDNRNTQMYTEEEKTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPD 60
MDNRNTQMYTEEEKTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPD
Sbjct: 1 MDNRNTQMYTEEEKTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPD 60
Query: 61 RAQQQPQKPAVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPV 120
RAQQQPQKPAVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPV
Sbjct: 61 RAQQQPQKPAVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPV 120
Query: 121 PTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPVLLGPALDLGWRRME 180
PTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPVLLGPALDLGWRRME
Sbjct: 121 PTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPVLLGPALDLGWRRME 180
Query: 181 LLHQSSERTLSYAKARQEPEEQSLQKLYQNREKSEEQLTLKQEEAFRSYFEIFNGPGEVD 240
LLHQSSERTLSYAKARQEPEEQSLQKLYQNREKSEEQLTLKQEEAFRSYFEIFNGPGEVD
Sbjct: 181 LLHQSSERTLSYAKARQEPEEQSLQKLYQNREKSEEQLTLKQEEAFRSYFEIFNGPGEVD 240
Query: 241 AQSLKNILLLMGFSVTLAQVEDALMSADVNGDGRVDFKDFLAVMTDTRRFFCSVEQNALS 300
AQSLKNILLLMGFSVTLAQVEDALMSADVNGDGRVDFKDFLAVMTDTRRFFCSVEQNALS
Sbjct: 241 AQSLKNILLLMGFSVTLAQVEDALMSADVNGDGRVDFKDFLAVMTDTRRFFCSVEQNALS 300
Query: 301 DMAPHNPHTLLFEILSLLVEMLALPEAVLEEITNYYQKKLKEGTCKAQEMEAAVGRLRLQ 360
DMAPHNPHTLLFEILSLLVEMLALPEAVLEEITNYYQKKLKEGTCKAQEMEAAVGRLRLQ
Sbjct: 301 DMAPHNPHTLLFEILSLLVEMLALPEAVLEEITNYYQKKLKEGTCKAQEMEAAVGRLRLQ 360
Query: 361 KLPYNPQQEESSEVPERKVLSILSRLKQQNYAPNLQSPYAQVPCILLCPQLDKKMVRRQP 420
KLPYNPQQEESSEVPERKVLSILSRLKQQNYAPNLQSPYAQVPCILLCPQLDKKMVRRQP
Sbjct: 361 KLPYNPQQEESSEVPERKVLSILSRLKQQNYAPNLQSPYAQVPCILLCPQLDKKMVRRQP 420
Query: 421 SNHYALDQCTPPGLDPDIRSPFFQSGSQGNREHNSDSRKWLSSVPARTH 469
SNHYALDQCTPPGLDPDIRSPFFQSGSQGNREHNSDSRKWLSSVPARTH
Sbjct: 421 SNHYALDQCTPPGLDPDIRSPFFQSGSQGNREHNSDSRKWLSSVPARTH 469
>gi|222418696 EF-hand calcium binding domain 3 isoform a [Homo
sapiens]
Length = 490
Score = 81.6 bits (200), Expect = 1e-15
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 21/225 (9%)
Query: 203 SLQKLYQNREKSEEQLTLKQEEAFRSYFEIF--NGPGEVDAQSLKNILLLMGFSVTLAQV 260
SLQ Q++EK +L+ Q AF+ + F + G +D L + +G ++T V
Sbjct: 84 SLQCQLQHKEK---KLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDV 140
Query: 261 EDALMSADVNGDGRVDFKDFLAVMTDTRRFFCSV--EQNALSDMAPHNPHTLLFEILSLL 318
+ L AD++ DG+V+F DF+ V+TD F +V E+ D+A NP LLFEILS L
Sbjct: 141 YNELKCADIDRDGKVNFSDFIKVLTDKNLFLKAVVPEKETCLDLA-GNPGILLFEILSRL 199
Query: 319 VEMLALPEAVLEEITNYYQKKLKE--GTCKAQEMEAAVGRLRLQKLPYNPQQEESSE--- 373
+E ALP + EI +Y+Q+K + G+ L+ P +
Sbjct: 200 LETSALPRKSIIEIVSYFQRKFQHTGPGMLWSPYTMGYGKRTLKPDICTPPSSSMAAFAN 259
Query: 374 ------VPERKVLSILSRLKQQNYAPNLQSPYAQVPCILLCPQLD 412
+ E+ + L LK+ N + SPY+++P L P +D
Sbjct: 260 AARIAIMKEKDLFKFLEELKRCNSGSD--SPYSKIPIFPLFPNVD 302
>gi|27735113 EF-hand calcium binding domain 3 isoform b [Homo
sapiens]
Length = 438
Score = 81.6 bits (200), Expect = 1e-15
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 21/225 (9%)
Query: 203 SLQKLYQNREKSEEQLTLKQEEAFRSYFEIF--NGPGEVDAQSLKNILLLMGFSVTLAQV 260
SLQ Q++EK +L+ Q AF+ + F + G +D L + +G ++T V
Sbjct: 32 SLQCQLQHKEK---KLSASQMAAFQDAYNFFYKDKTGCIDFHGLMCTVAKLGMNLTKHDV 88
Query: 261 EDALMSADVNGDGRVDFKDFLAVMTDTRRFFCSV--EQNALSDMAPHNPHTLLFEILSLL 318
+ L AD++ DG+V+F DF+ V+TD F +V E+ D+A NP LLFEILS L
Sbjct: 89 YNELKCADIDRDGKVNFSDFIKVLTDKNLFLKAVVPEKETCLDLA-GNPGILLFEILSRL 147
Query: 319 VEMLALPEAVLEEITNYYQKKLKE--GTCKAQEMEAAVGRLRLQKLPYNPQQEESSE--- 373
+E ALP + EI +Y+Q+K + G+ L+ P +
Sbjct: 148 LETSALPRKSIIEIVSYFQRKFQHTGPGMLWSPYTMGYGKRTLKPDICTPPSSSMAAFAN 207
Query: 374 ------VPERKVLSILSRLKQQNYAPNLQSPYAQVPCILLCPQLD 412
+ E+ + L LK+ N + SPY+++P L P +D
Sbjct: 208 AARIAIMKEKDLFKFLEELKRCNSGSD--SPYSKIPIFPLFPNVD 250
>gi|55749531 splicing factor 3B subunit 2 [Homo sapiens]
Length = 895
Score = 51.6 bits (122), Expect = 2e-06
Identities = 54/211 (25%), Positives = 81/211 (38%), Gaps = 18/211 (8%)
Query: 21 PSTPGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPDRAQQQPQKPAVAAGTQSLGN 80
P P P G G + P GP PP V + E +R + Q+ A+ Q
Sbjct: 106 PPPPPPPPGLGLGFPMAHPPNLGPPPPLRVGEPVALSEEERLKLAQQQAALLM--QQEER 163
Query: 81 FRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVP----------TSAPSLPQT 130
+Q L E E +E R A + Q+ + TPVP P P+
Sbjct: 164 AKQQGDHSLKEHELLEQQKRAAVLLEQERQQEIAKMGTPVPRPPQDMGQIGVRTPLGPRV 223
Query: 131 PASVPASGPSWARLPAPGPEPAPMGAPVP-----TSMPCPVLLGPALDLGWRRMELLHQS 185
A V GP+ LP P P P G P P M P +GP + ++ L +S
Sbjct: 224 AAPVGPVGPTPTVLPMGAPVPRPRGPPPPPGDENREMDDP-SVGPKIPQALEKILQLKES 282
Query: 186 SERTLSYAKARQEPEEQSLQKLYQNREKSEE 216
+ ++ + +E E + L Q+ ++EE
Sbjct: 283 RQEEMNSQQEEEEMETDARSSLGQSASETEE 313
Score = 30.0 bits (66), Expect = 4.7
Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 9/106 (8%)
Query: 119 PVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPVLLGPALDLGWRR 178
P P SA LP P P G + P P P P P G + M P LGP L R
Sbjct: 80 PPPMSA-QLPGIPMPPPPLGLPPLQ-PPPPPPPPPPGLGLGFPMAHPPNLGPPPPL--RV 135
Query: 179 MELLHQSSERTLSYAKARQEPEEQSLQKLYQNREKSEEQLTLKQEE 224
E + S E L A+ ++ +L + R K + +LK+ E
Sbjct: 136 GEPVALSEEERLKLAQ-----QQAALLMQQEERAKQQGDHSLKEHE 176
>gi|4757974 centrin 1 [Homo sapiens]
Length = 172
Score = 50.1 bits (118), Expect = 4e-06
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 217 QLTLKQEEAFRSYFEIFN--GPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDGR 274
+LT Q++ R F++F+ G G +DA+ LK + +GF +++ + D G G+
Sbjct: 24 ELTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEVDREGTGK 83
Query: 275 VDFKDFLAVMT 285
+ F DFLAVMT
Sbjct: 84 ISFNDFLAVMT 94
Score = 35.8 bits (81), Expect = 0.086
Identities = 22/76 (28%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 212 EKSEEQLTLKQEEAFRSYFEIFNGPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNG 271
EK ++ LK AFR + + + G++ ++LK + +G ++T ++++ + AD +G
Sbjct: 99 EKDTKEEILK---AFRLFDD--DETGKISFKNLKRVANELGENLTDEELQEMIDEADRDG 153
Query: 272 DGRVDFKDFLAVMTDT 287
DG V+ ++FL +M T
Sbjct: 154 DGEVNEEEFLRIMKKT 169
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 48.9 bits (115), Expect = 1e-05
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 209 QNREKSEEQLTLKQEEAFRSYFEIFN--GPGEVDAQSLKNILLLMGFSVTLAQVEDALMS 266
+ R + +LT +Q++ R F++F+ G G +D + LK + +GF +++ +
Sbjct: 16 RKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISE 75
Query: 267 ADVNGDGRVDFKDFLAVMT 285
D G G+++F DFL VMT
Sbjct: 76 IDKEGTGKMNFGDFLTVMT 94
Score = 35.4 bits (80), Expect = 0.11
Identities = 18/67 (26%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 223 EEAFRSYFEIFNGP--GEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDGRVDFKDF 280
+E F++F+ G++ ++LK + +G ++T ++++ + AD +GDG V ++F
Sbjct: 103 KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 162
Query: 281 LAVMTDT 287
L +M T
Sbjct: 163 LRIMKKT 169
>gi|58218968 calmodulin 3 [Homo sapiens]
Length = 149
Score = 48.5 bits (114), Expect = 1e-05
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 223 EEAFRSYFEIFN--GPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDGRVDFKDF 280
EE R F +F+ G G + A L++++ +G +T +V++ + AD++GDG+V++++F
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 281 LAVMT 285
+ +MT
Sbjct: 143 VQMMT 147
Score = 46.6 bits (109), Expect = 5e-05
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 216 EQLTLKQEEAFRSYFEIFN--GPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDG 273
+QLT +Q F+ F +F+ G G + + L ++ +G + T A+++D + D +G+G
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 274 RVDFKDFLAVM 284
+DF +FL +M
Sbjct: 63 TIDFPEFLTMM 73
>gi|4502549 calmodulin 2 [Homo sapiens]
Length = 149
Score = 48.5 bits (114), Expect = 1e-05
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 223 EEAFRSYFEIFN--GPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDGRVDFKDF 280
EE R F +F+ G G + A L++++ +G +T +V++ + AD++GDG+V++++F
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 281 LAVMT 285
+ +MT
Sbjct: 143 VQMMT 147
Score = 46.6 bits (109), Expect = 5e-05
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 216 EQLTLKQEEAFRSYFEIFN--GPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDG 273
+QLT +Q F+ F +F+ G G + + L ++ +G + T A+++D + D +G+G
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 274 RVDFKDFLAVM 284
+DF +FL +M
Sbjct: 63 TIDFPEFLTMM 73
>gi|5901912 calmodulin 1 [Homo sapiens]
Length = 149
Score = 48.5 bits (114), Expect = 1e-05
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 223 EEAFRSYFEIFN--GPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDGRVDFKDF 280
EE R F +F+ G G + A L++++ +G +T +V++ + AD++GDG+V++++F
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 281 LAVMT 285
+ +MT
Sbjct: 143 VQMMT 147
Score = 46.6 bits (109), Expect = 5e-05
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 216 EQLTLKQEEAFRSYFEIFN--GPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDG 273
+QLT +Q F+ F +F+ G G + + L ++ +G + T A+++D + D +G+G
Sbjct: 3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62
Query: 274 RVDFKDFLAVM 284
+DF +FL +M
Sbjct: 63 TIDFPEFLTMM 73
>gi|4503519 eukaryotic translation initiation factor 3, subunit 5
epsilon, 47kDa [Homo sapiens]
Length = 357
Score = 47.0 bits (110), Expect = 4e-05
Identities = 27/71 (38%), Positives = 31/71 (43%), Gaps = 12/71 (16%)
Query: 114 PRTLTPVPTSAPSLPQTPASVPASGPSWARLPAPGPEPA------------PMGAPVPTS 161
P T TPVP +AP+ P PA+ P A PA +PA P A P
Sbjct: 12 PATPTPVPAAAPASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATAAPGQTPASAQAPAQ 71
Query: 162 MPCPVLLGPAL 172
P P L GPAL
Sbjct: 72 TPAPALPGPAL 82
Score = 38.9 bits (89), Expect = 0.010
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 120 VPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMP 163
VP SAP TP VPA+ P+ P P PAP APVP + P
Sbjct: 6 VPVSAPP--ATPTPVPAAAPA----SVPAPTPAPAAAPVPAAAP 43
Score = 30.0 bits (66), Expect = 4.7
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 130 TPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPV 166
TPA VP S P P P PA + AP P PV
Sbjct: 3 TPA-VPVSAPPATPTPVPAAAPASVPAPTPAPAAAPV 38
Score = 29.3 bits (64), Expect = 8.0
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 21/79 (26%)
Query: 119 PVPTSAPSLPQTPASV----------PASGPSWARLPAPGPEPAPMGAPVPTSMP----- 163
PVP +AP+ PA+ PAS A+ PA P PA G +P P
Sbjct: 37 PVPAAAPASSSDPAAAAAATAAPGQTPAS----AQAPAQTPAPALPGPALPGPFPGGRVV 92
Query: 164 --CPVLLGPALDLGWRRME 180
PV+L +D RR E
Sbjct: 93 RLHPVILASIVDSYERRNE 111
>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
Length = 160
Score = 47.0 bits (110), Expect = 4e-05
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 221 KQEEAFRSYFEIF--NGPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDGRVDFK 278
K EE F IF N G +D + L I G VT ++E + D N DGR+DF
Sbjct: 91 KSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFD 150
Query: 279 DFLAVM 284
+FL +M
Sbjct: 151 EFLKMM 156
Score = 40.0 bits (92), Expect = 0.005
Identities = 19/77 (24%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 212 EKSEEQLTLKQE--EAFRSYFEIFN--GPGEVDAQSLKNILLLMGFSVTLAQVEDALMSA 267
+++E + L +E F++ F++F+ G G++ + L ++ ++G + T +++ +
Sbjct: 4 QQAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEV 63
Query: 268 DVNGDGRVDFKDFLAVM 284
D +G G +DF++FL +M
Sbjct: 64 DEDGSGTIDFEEFLVMM 80
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 46.6 bits (109), Expect = 5e-05
Identities = 42/140 (30%), Positives = 50/140 (35%), Gaps = 25/140 (17%)
Query: 24 PGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPDRAQQQPQKPAVAAGTQSLGNFRQ 83
P P A G + PAP PL P P Q P P+
Sbjct: 284 PVPASAPPSGPVPLSAPAPAPLSVPV------SAPPLALIQAPVPPSAPT---------- 327
Query: 84 GFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTSAPSLPQTPASVPASGPSWAR 143
L V + AS + A S TP P+S P P TP +PA P+
Sbjct: 328 ---LVLAPVPTPVLAPMPASTPPAAPAPPSVPMPTPTPSSGP--PSTPTLIPAFAPT--- 379
Query: 144 LPAPGPEPAPMGAPVPTSMP 163
P P P PAP+ P PT MP
Sbjct: 380 -PVPAPTPAPIFTPAPTPMP 398
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/46 (45%), Positives = 23/46 (50%)
Query: 120 VPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCP 165
VP SAP L A VP S P+ P P P APM A P + P P
Sbjct: 307 VPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPAP 352
Score = 40.8 bits (94), Expect = 0.003
Identities = 21/48 (43%), Positives = 25/48 (52%)
Query: 119 PVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPV 166
P P S P TP+S P S P+ AP P PAP AP+ T P P+
Sbjct: 350 PAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPM 397
Score = 40.0 bits (92), Expect = 0.005
Identities = 27/57 (47%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 119 PVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAP--MGAPVPTSM--PCPVLLGPA 171
PVP SAP+ P SVP S P A + AP P AP + APVPT + P P PA
Sbjct: 294 PVPLSAPA--PAPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPA 348
Score = 38.5 bits (88), Expect = 0.013
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 117 LTPVPTSAPSLPQTPASVPASGP--SWARLPAPGPEPAPMGAPVPTSMPCPVLL 168
L PVP AP+ P P + S P A + P P AP PVP S P P L
Sbjct: 252 LAPVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLSAPAPAPL 305
Score = 38.1 bits (87), Expect = 0.017
Identities = 24/57 (42%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 119 PVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMG--------APVPTSMPCPVL 167
P+ SA L PAS P SGP PAP P P+ APVP S P VL
Sbjct: 274 PLSVSASVLVPVPASAPPSGPVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLVL 330
Score = 35.0 bits (79), Expect = 0.15
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 120 VPTSAPSLPQTPASVPASGPSWARLPAPG----PEPAPMGAPVPTSMPCP 165
VP S P Q P SVPA P +P P P+P APVP P P
Sbjct: 213 VPHSVPDAFQVPLSVPAPVPHSGLVPVQVATSVPAPSPPLAPVPALAPAP 262
Score = 32.3 bits (72), Expect = 0.95
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Query: 121 PTSAPSLPQTP--ASVPASGPSWARLPAPGPEPAPMGAPVP----TSMPCP 165
P AP P P ASVP S P ++P P P P VP TS+P P
Sbjct: 198 PLPAPICPPAPGSASVPHSVPDAFQVPLSVPAPVPHSGLVPVQVATSVPAP 248
Score = 29.6 bits (65), Expect = 6.1
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 101 RASKARSQTAQKSPRTLTPVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPT 160
+A +R +K+ L + T P ++P +++ LPAP PAP A VP
Sbjct: 160 KALDSRQGVGEKNTFILATLGTGVP----VEGTLPLVTTNFSPLPAPICPPAPGSASVPH 215
Query: 161 SMP 163
S+P
Sbjct: 216 SVP 218
>gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]
Length = 370
Score = 46.2 bits (108), Expect = 6e-05
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 224 EAFRSYFEIFNGPGEVDAQSLKNILL-LMGFSVTLAQVEDALMSADVNGDGRVDFKDFLA 282
+AFR + NG GE+ L+ + L+G V +E+ + D+NGDGRVDF++F+
Sbjct: 309 DAFREFDT--NGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVR 366
Query: 283 VMT 285
+M+
Sbjct: 367 MMS 369
Score = 43.1 bits (100), Expect = 5e-04
Identities = 71/298 (23%), Positives = 106/298 (35%), Gaps = 54/298 (18%)
Query: 31 GGGEAVETHPAPGPLPPPEVRDIGERREPDRAQQQPQKPAVAA----GTQSLGNFRQGFM 86
GG A P G V +G RREP P A G S G M
Sbjct: 3 GGDGAAFKRPGDGARLQ-RVLGLGSRREPRSLPAGGPAPRRTAPPPPGHASAG---PAAM 58
Query: 87 KCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTSAPSLP--QTPASVPA----SGPS 140
+ + + S +A+ A + ++PR P P LP + P S PA SG
Sbjct: 59 SSHIAKSESKTSLLKAAAAAASGGSRAPRH---GPARDPGLPSRRLPGSCPATPQSSGDP 115
Query: 141 WARLPAPGPEPAPMGA------------------PVPTSMPCPVL--------------L 168
+R P P P GA P S P P L
Sbjct: 116 SSRRPLCRPAPREEGARGSQRVLPQAHCRPREALPAAASRPSPSSPLPPARGRDGEERGL 175
Query: 169 GPALDLGWRRMELLHQSSERTLSYAKARQEPEEQSLQKLYQNREKSEEQLTLKQEEAFRS 228
PAL L R L + ++ A + +P L+ + + + L ++ E R
Sbjct: 176 SPALGL---RGSLRARGRGDSVPAAASEADPFLHRLRPMLSSAFGQDRSLRPEEIEELRE 232
Query: 229 YFEIFNGP--GEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDGRVDFKDFLAVM 284
F F+ G ++ + L N + MG+ T ++ + ++N G VDF DF+ +M
Sbjct: 233 AFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELM 290
>gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens]
Length = 167
Score = 46.2 bits (108), Expect = 6e-05
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 224 EAFRSYFEIFNGPGEVDAQSLKNILL-LMGFSVTLAQVEDALMSADVNGDGRVDFKDFLA 282
+AFR + NG GE+ L+ + L+G V +E+ + D+NGDGRVDF++F+
Sbjct: 106 DAFREFDT--NGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVR 163
Query: 283 VMT 285
+M+
Sbjct: 164 MMS 166
Score = 34.3 bits (77), Expect = 0.25
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 209 QNREKSEEQLTLKQEEAFRSYFEIFNGP--GEVDAQSLKNILLLMGFSVTLAQVEDALMS 266
+N + + L ++ E R F F+ G ++ + L N + MG+ T ++ +
Sbjct: 10 RNLSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQ 69
Query: 267 ADVNGDGRVDFKDFLAVM 284
++N G VDF DF+ +M
Sbjct: 70 INMNLGGHVDFDDFVELM 87
>gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens]
Length = 227
Score = 46.2 bits (108), Expect = 6e-05
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 224 EAFRSYFEIFNGPGEVDAQSLKNILL-LMGFSVTLAQVEDALMSADVNGDGRVDFKDFLA 282
+AFR + NG GE+ L+ + L+G V +E+ + D+NGDGRVDF++F+
Sbjct: 166 DAFREFDT--NGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVR 223
Query: 283 VMT 285
+M+
Sbjct: 224 MMS 226
Score = 34.7 bits (78), Expect = 0.19
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 204 LQKLYQNREKSEEQLTLKQEEAFRSYFEIFNGP--GEVDAQSLKNILLLMGFSVTLAQVE 261
L+K + + + L ++ E R F F+ G ++ + L N + MG+ T ++
Sbjct: 65 LRKGFAENRQPDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELI 124
Query: 262 DALMSADVNGDGRVDFKDFLAVM 284
+ ++N G VDF DF+ +M
Sbjct: 125 ELSQQINMNLGGHVDFDDFVELM 147
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 45.4 bits (106), Expect = 1e-04
Identities = 41/143 (28%), Positives = 58/143 (40%), Gaps = 13/143 (9%)
Query: 106 RSQTAQKSPRTLTPVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCP 165
R QT + P P P P+ P PAS PA S + +P PA P+ T + P
Sbjct: 2033 RPQTPEPPPPPPPPPPPPLPAAPPQPASTPAIPASAPPITSPTIAPAQPSVPL-TQLSMP 2091
Query: 166 VLLGPALDLGWRRMELLHQSSERTLSYAKARQEPEEQSLQKLYQNR----------EKSE 215
+ L L + M L Q+ L EP L +LYQ++ ++
Sbjct: 2092 MELPIFSPLMMQTMPL--QTLPAQLPPQLGPVEPLPADLAQLYQHQLNPTLLQQQNKRPR 2149
Query: 216 EQLTLKQEEAFRSYFEIFNGPGE 238
++T Q R YF+I N P E
Sbjct: 2150 TRITDDQLRVLRQYFDINNSPSE 2172
Score = 31.2 bits (69), Expect = 2.1
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Query: 91 EVEKMEASHRRASKARSQTAQKS--PRTLTPVPTSAPSLPQTPASVPASGPSWARLPAPG 148
+ ++ + + + + Q QK+ P+ P S PSLPQ P P P LP
Sbjct: 2442 QTQEKQGQPKPELQQQEQPEQKTNTPQQKLPQLVSLPSLPQPPPQAP---PPQCPLPQSS 2498
Query: 149 PEPAPMG----APVPTSMP 163
P P+ + P+ TS P
Sbjct: 2499 PSPSQLSHLPLKPLHTSTP 2517
>gi|4507615 troponin C, slow [Homo sapiens]
Length = 161
Score = 45.4 bits (106), Expect = 1e-04
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 221 KQEEAFRSYFEIF--NGPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDGRVDFK 278
K EE F +F N G +D LK +L G ++T +E+ + D N DGR+D+
Sbjct: 92 KSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 279 DFLAVM 284
+FL M
Sbjct: 152 EFLEFM 157
Score = 43.1 bits (100), Expect = 5e-04
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 216 EQLTLKQEEAFRSYFEIF---NGPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGD 272
EQLT +Q+ F++ F+IF G + + L ++ ++G + T ++++ + D +G
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGS 69
Query: 273 GRVDFKDFLAVM 284
G VDF +FL +M
Sbjct: 70 GTVDFDEFLVMM 81
>gi|50897266 calmodulin-like 6 [Homo sapiens]
Length = 181
Score = 45.4 bits (106), Expect = 1e-04
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 222 QEEAFRSYFEIFN--GPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDGRVDFKD 279
QE R+ F +F+ G G +D +LK +L+ G + + E + AD +GD +D+++
Sbjct: 108 QESELRAAFRVFDKEGKGYIDWNTLKYVLMNAGEPLNEVEAEQMMKEADKDGDRTIDYEE 167
Query: 280 FLAVMT 285
F+A+MT
Sbjct: 168 FVAMMT 173
Score = 34.7 bits (78), Expect = 0.19
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 216 EQLTLKQEEAFRSYFEIFN--GPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDG 273
E+L+ +Q + ++ FE+F+ G GEV L+ ++ L+G + T +++ D + G
Sbjct: 28 ERLSAEQIKEYKGVFEMFDEEGNGEVKTGELEWLMSLLGINPTKSELASMAKDVDRDNKG 87
Query: 274 RVDFKDFLAVM 284
+ FLA+M
Sbjct: 88 FFNCDGFLALM 98
>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
sapiens]
Length = 1158
Score = 44.7 bits (104), Expect = 2e-04
Identities = 37/160 (23%), Positives = 67/160 (41%), Gaps = 6/160 (3%)
Query: 11 EEEKTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPDRAQQQPQKPA 70
E++ P TP +KA+ GG+ + +PP + +D G++ + D+ + P K +
Sbjct: 51 EDDVEAPPPPEPTPRVRKAQAGGKPGKRPGTAAEVPPEKTKDKGKKGKKDKGPKVP-KES 109
Query: 71 VAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPT-SAPSLPQ 129
+ + ++ K + ++ + K + A K P+ P T PS +
Sbjct: 110 LEGSPRPPKKGKEKPPKATKKPKEKPPKATKKPKEKPPKATKKPKEKPPKATKKPPSGKR 169
Query: 130 TPASVPASGPSW--ARLPAPGPEPAPM--GAPVPTSMPCP 165
P P+ W P+PGPE P GAP+ + P
Sbjct: 170 PPILAPSETLEWPLPPPPSPGPEELPQEGGAPLSNNWQNP 209
>gi|4885111 calmodulin-like 3 [Homo sapiens]
Length = 149
Score = 44.7 bits (104), Expect = 2e-04
Identities = 20/64 (31%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 223 EEAFRSYFEIFN--GPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDGRVDFKDF 280
EE R F +F+ G G V A L++++ +G ++ +V++ + +AD +GDG+V++++F
Sbjct: 83 EEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEF 142
Query: 281 LAVM 284
+ V+
Sbjct: 143 VRVL 146
Score = 44.3 bits (103), Expect = 2e-04
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 216 EQLTLKQEEAFRSYFEIFN--GPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDG 273
+QLT +Q F+ F +F+ G G + + L ++ +G + T A++ D + D +G+G
Sbjct: 3 DQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNG 62
Query: 274 RVDFKDFLAVM 284
VDF +FL +M
Sbjct: 63 TVDFPEFLGMM 73
>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
Length = 749
Score = 44.7 bits (104), Expect = 2e-04
Identities = 49/226 (21%), Positives = 81/226 (35%), Gaps = 45/226 (19%)
Query: 18 PFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPDRAQQQPQKPAVAAGTQS 77
P LP TP P + G AP + PP +I + + + + + P
Sbjct: 337 PHLPGTPRPTSSLPPGSV---KAAPAQVRPPSPGNIRPVKREVKVEPEKKDP-------- 385
Query: 78 LGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTSAPSLPQTPASVPAS 137
E E + ++ + K R+ + T V P+ P+ + PA
Sbjct: 386 -------------EKEPQKVANEPSLKGRAPLVKVEEAT---VEERTPAEPEVGPAAPAM 429
Query: 138 GPSWARLPAPGPEPAPMGAPVPTSMPCPVLL----------------GPALDLGWRRMEL 181
P+ A PAP PAP P P + P A L + L
Sbjct: 430 APAPASAPAPASAPAPAPVPTPAMVSAPSSTVNASASVKTSAGTTDPEEATRLLAEKRRL 489
Query: 182 LHQSSERTLSYAKARQEPEEQSLQKLYQNREKSEEQLTLKQEEAFR 227
+ E+ + ++E E Q ++L Q +EE+ T ++EE+ R
Sbjct: 490 AREQREKEERERREQEELERQKREELAQ--RVAEERTTRREEESRR 533
>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
Length = 651
Score = 44.7 bits (104), Expect = 2e-04
Identities = 47/176 (26%), Positives = 71/176 (40%), Gaps = 28/176 (15%)
Query: 20 LPSTPGPKKAKGGGE-------AVETHPAPGPLPPPEVRDIGERREPDRAQQQPQKP--A 70
+PS+ G GGG A P PGP PPPE +E A + P +P A
Sbjct: 1 MPSSLGQPDGGGGGGGGGGGVGAAGEDPGPGPAPPPE-----GAQEAAPAPRPPPEPDDA 55
Query: 71 VAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTP-------VPTS 123
AA +L + + ++ A+ A+ A +P + P PT
Sbjct: 56 AAALRLALDQLSALGLGGAGDTDEEGAAGDGAAAAGGADGGAAPEPVPPDGPEAGAPPTL 115
Query: 124 APSLPQTPASVPASGPSWARLPAPGPEPAPMG-----APVPTSMPCPVLLGPALDL 174
AP++ P S+P P+ + P P P P+P AP P ++ P LL + +
Sbjct: 116 APAV--APGSLPLLDPNASPPPPPPPRPSPPDVFAGFAPHPAALGPPTLLADQMSV 169
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 44.3 bits (103), Expect = 2e-04
Identities = 53/221 (23%), Positives = 78/221 (35%), Gaps = 35/221 (15%)
Query: 42 PGPLPPPEVRDIGERREPDRAQQQPQKPAVAAGTQSLGNFRQGFMKCLLEVEKMEASHRR 101
P LP PE G +P A P + G + + +K EAS
Sbjct: 721 PRLLPGPENHRAGSNEDPILAPSGTPPPTIPPDETFGGRVPR---PAFVHYDKEEASDVE 777
Query: 102 AS--KARSQTAQKSPRTLTPVPTSAPSLPQTPASVPASGPSWARLP------------AP 147
S + P L P+P PS TP + +GP A P AP
Sbjct: 778 ISLESDSDDSVVIVPEGLPPLPPPPPS-GATPPPIAPTGPPTASPPVPAKEEPEELPAAP 836
Query: 148 GPEPAPMGAPVPTSMPCPVLL---------------GPALDLGWRRMELLHQSSERTLSY 192
GP P P P P +P PV L PAL+ + + E
Sbjct: 837 GPLPPP--PPPPPPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEEEEE 894
Query: 193 AKARQEPEEQSLQKLYQNREKSEEQLTLKQEEAFRSYFEIF 233
+ +E EE+ ++ ++ E+ EE+ ++EE + E F
Sbjct: 895 EEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEF 935
Score = 34.3 bits (77), Expect = 0.25
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 8/60 (13%)
Query: 114 PRTLTPVPTSAPSLPQT----PASVPASGPSWARLPAPGPEPA----PMGAPVPTSMPCP 165
P TP P P P P P PS +P+ GP P+ P PVP++ P P
Sbjct: 643 PTCPTPAPVPPPEAPSPFRAPPFHPPGPMPSVGSMPSAGPMPSAGPMPSAGPVPSARPGP 702
Score = 30.0 bits (66), Expect = 4.7
Identities = 46/201 (22%), Positives = 70/201 (34%), Gaps = 46/201 (22%)
Query: 11 EEEKTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPDRAQQQPQ-KP 69
EE++ L + GGE E P P LPP + P + Q +P+ +P
Sbjct: 948 EEDEEEEEELEEVEDLEFGTAGGEVEEGAPPPPTLPPA----LPPPESPPKVQPEPEPEP 1003
Query: 70 AVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTSAPSLPQ 129
+ LLEVE+ R + PT AP
Sbjct: 1004 GL-----------------LLEVEEPGTEEERGADT--------------APTLAPEALP 1032
Query: 130 TPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPVLLGPALDLGWRRMELLHQSSERT 189
+ V G S PA GP P + P++ P LL + G ++ Q T
Sbjct: 1033 SQGEVEREGES----PAAGPPPQELVEEEPSAP--PTLLEEETEDGSDKV----QPPPET 1082
Query: 190 LSYAKARQEPEEQSLQKLYQN 210
+ + E E ++LQ+ Q+
Sbjct: 1083 PAEEEMETETEAEALQEKEQD 1103
>gi|33186895 selenoprotein V [Homo sapiens]
Length = 346
Score = 44.3 bits (103), Expect = 2e-04
Identities = 24/57 (42%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 110 AQKSPRTLTPVPTSAPSLPQTPAS------VPASGPSWARLPAPGPEPAPMGAPVPT 160
A SP LTP P P+L TPA VP P+W P P P P PVPT
Sbjct: 55 AGTSPLVLTPAPAQIPTLVPTPALARIPRLVPPPAPAWIPTPVPTPVPVRNPTPVPT 111
Score = 40.8 bits (94), Expect = 0.003
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 94 KMEASHRRASKARSQTAQKSP---------RTLTPVPTSAPS------LPQTPASVPA-- 136
+ S R ++ R+ T ++P RTLTPV T +P+ L PA +P
Sbjct: 14 RTSTSVRASTPTRTPTPLRTPTPVRTRTPIRTLTPVLTPSPAGTSPLVLTPAPAQIPTLV 73
Query: 137 SGPSWARLPAPGPEPAPMGAPVPTSMPCPV 166
P+ AR+P P PAP A +PT +P PV
Sbjct: 74 PTPALARIPRLVPPPAP--AWIPTPVPTPV 101
Score = 40.8 bits (94), Expect = 0.003
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 117 LTPVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPV-LLGPALDLG 175
L P P AP LP P P PS +P+ E P P+PT P GP LD
Sbjct: 151 LDPPPEPAPELPLLPEEDPEPAPSLKLIPSVSSEAGPAPGPLPTRTPLAANSPGPTLDFT 210
Query: 176 WR 177
+R
Sbjct: 211 FR 212
Score = 39.7 bits (91), Expect = 0.006
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 23/93 (24%)
Query: 97 ASHRRASKARSQTAQKSP---RTLTPVPTSAPSLPQTPASVPASG--------------- 138
+S R ++ R+ T ++P RT TPV T P TP P+
Sbjct: 11 SSARTSTSVRASTPTRTPTPLRTPTPVRTRTPIRTLTPVLTPSPAGTSPLVLTPAPAQIP 70
Query: 139 -----PSWARLPAPGPEPAPMGAPVPTSMPCPV 166
P+ AR+P P PAP P P P PV
Sbjct: 71 TLVPTPALARIPRLVPPPAPAWIPTPVPTPVPV 103
Score = 31.2 bits (69), Expect = 2.1
Identities = 17/53 (32%), Positives = 21/53 (39%)
Query: 118 TPVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPVLLGP 170
TP P+SA + AS P P+ R P P P+ P P P P
Sbjct: 7 TPAPSSARTSTSVRASTPTRTPTPLRTPTPVRTRTPIRTLTPVLTPSPAGTSP 59
Score = 31.2 bits (69), Expect = 2.1
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 12/70 (17%)
Query: 110 AQKSPRTLTPV----PTSAPSLPQTPASVPASGPSWARLPAPGPEPA--------PMGAP 157
A S RT T V PT P+ +TP V P P P PA P A
Sbjct: 9 APSSARTSTSVRASTPTRTPTPLRTPTPVRTRTPIRTLTPVLTPSPAGTSPLVLTPAPAQ 68
Query: 158 VPTSMPCPVL 167
+PT +P P L
Sbjct: 69 IPTLVPTPAL 78
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 43.9 bits (102), Expect = 3e-04
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 117 LTPVPTSAPSLPQTPASVPAS----GPSWARLPAPGPEPAPMGAPVPTSMPCP 165
L P P AP+ P + P + P+ A PAP P PAP+ AP P P P
Sbjct: 143 LAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAP 195
Score = 41.2 bits (95), Expect = 0.002
Identities = 19/45 (42%), Positives = 22/45 (48%)
Query: 121 PTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCP 165
P + L PA PA P+ A + AP P PAP AP P P P
Sbjct: 161 PVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 205
Score = 40.4 bits (93), Expect = 0.003
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 16/71 (22%)
Query: 111 QKSPRTL--TPVPTSAPSLPQTPASVPASGPSWARL--------------PAPGPEPAPM 154
+++P L PVP A + P P PA P+ A + PAP P PAP
Sbjct: 119 EEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPA 178
Query: 155 GAPVPTSMPCP 165
AP P + P P
Sbjct: 179 PAPAPVAAPAP 189
Score = 40.4 bits (93), Expect = 0.003
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 119 PVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAP 157
P P AP+ P + PA P+ A PAP P PAP AP
Sbjct: 171 PAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAP 209
Score = 39.3 bits (90), Expect = 0.008
Identities = 20/46 (43%), Positives = 21/46 (45%)
Query: 120 VPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCP 165
V AP+ PA PA P A PAP P PAP AP P P
Sbjct: 164 VAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAP 209
Score = 38.9 bits (89), Expect = 0.010
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 119 PVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPV-LLGPALDLGWR 177
P P +AP +V A P+ A PAP P P AP P P P PA D
Sbjct: 151 PAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAA-- 208
Query: 178 RMELLHQSSERTLSYAKARQEP 199
+S+E+ + + QEP
Sbjct: 209 ----PQESAEQGANQGQRGQEP 226
Score = 38.5 bits (88), Expect = 0.013
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 117 LTPVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVP 159
L P P AP+ PA V A P+ A PAP P PAP P
Sbjct: 167 LAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAP 209
Score = 36.6 bits (83), Expect = 0.050
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 105 ARSQTAQKSPRTLTPVPTSAPSLPQTPASVPASGPSWARL--PAPGPEPAPMGAPVPTSM 162
A S + + +L + + LP P PAS P + PAP P PAP+ APV +
Sbjct: 103 AVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPV 162
Query: 163 PCPVL 167
VL
Sbjct: 163 AVAVL 167
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 43.9 bits (102), Expect = 3e-04
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 117 LTPVPTSAPSLPQTPASVPAS----GPSWARLPAPGPEPAPMGAPVPTSMPCP 165
L P P AP+ P + P + P+ A PAP P PAP+ AP P P P
Sbjct: 143 LAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAP 195
Score = 41.2 bits (95), Expect = 0.002
Identities = 19/45 (42%), Positives = 22/45 (48%)
Query: 121 PTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCP 165
P + L PA PA P+ A + AP P PAP AP P P P
Sbjct: 161 PVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 205
Score = 40.4 bits (93), Expect = 0.003
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 16/71 (22%)
Query: 111 QKSPRTL--TPVPTSAPSLPQTPASVPASGPSWARL--------------PAPGPEPAPM 154
+++P L PVP A + P P PA P+ A + PAP P PAP
Sbjct: 119 EEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPA 178
Query: 155 GAPVPTSMPCP 165
AP P + P P
Sbjct: 179 PAPAPVAAPAP 189
Score = 40.4 bits (93), Expect = 0.003
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 119 PVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAP 157
P P AP+ P + PA P+ A PAP P PAP AP
Sbjct: 171 PAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAP 209
Score = 39.3 bits (90), Expect = 0.008
Identities = 20/46 (43%), Positives = 21/46 (45%)
Query: 120 VPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCP 165
V AP+ PA PA P A PAP P PAP AP P P
Sbjct: 164 VAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAP 209
Score = 38.9 bits (89), Expect = 0.010
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 119 PVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPV-LLGPALDLGWR 177
P P +AP +V A P+ A PAP P P AP P P P PA D
Sbjct: 151 PAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAA-- 208
Query: 178 RMELLHQSSERTLSYAKARQEP 199
+S+E+ + + QEP
Sbjct: 209 ----PQESAEQGANQGQRGQEP 226
Score = 38.5 bits (88), Expect = 0.013
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 117 LTPVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVP 159
L P P AP+ PA V A P+ A PAP P PAP P
Sbjct: 167 LAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAP 209
Score = 36.6 bits (83), Expect = 0.050
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 105 ARSQTAQKSPRTLTPVPTSAPSLPQTPASVPASGPSWARL--PAPGPEPAPMGAPVPTSM 162
A S + + +L + + LP P PAS P + PAP P PAP+ APV +
Sbjct: 103 AVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPV 162
Query: 163 PCPVL 167
VL
Sbjct: 163 AVAVL 167
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 43.9 bits (102), Expect = 3e-04
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 117 LTPVPTSAPSLPQTPASVPAS----GPSWARLPAPGPEPAPMGAPVPTSMPCP 165
L P P AP+ P + P + P+ A PAP P PAP+ AP P P P
Sbjct: 154 LAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAP 206
Score = 41.2 bits (95), Expect = 0.002
Identities = 19/45 (42%), Positives = 22/45 (48%)
Query: 121 PTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCP 165
P + L PA PA P+ A + AP P PAP AP P P P
Sbjct: 172 PVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 216
Score = 40.4 bits (93), Expect = 0.003
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 16/71 (22%)
Query: 111 QKSPRTL--TPVPTSAPSLPQTPASVPASGPSWARL--------------PAPGPEPAPM 154
+++P L PVP A + P P PA P+ A + PAP P PAP
Sbjct: 130 EEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPA 189
Query: 155 GAPVPTSMPCP 165
AP P + P P
Sbjct: 190 PAPAPVAAPAP 200
Score = 40.4 bits (93), Expect = 0.003
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 119 PVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAP 157
P P AP+ P + PA P+ A PAP P PAP AP
Sbjct: 182 PAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAP 220
Score = 39.3 bits (90), Expect = 0.008
Identities = 20/46 (43%), Positives = 21/46 (45%)
Query: 120 VPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCP 165
V AP+ PA PA P A PAP P PAP AP P P
Sbjct: 175 VAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAP 220
Score = 38.9 bits (89), Expect = 0.010
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 119 PVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPV-LLGPALDLGWR 177
P P +AP +V A P+ A PAP P P AP P P P PA D
Sbjct: 162 PAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAA-- 219
Query: 178 RMELLHQSSERTLSYAKARQEP 199
+S+E+ + + QEP
Sbjct: 220 ----PQESAEQGANQGQRGQEP 237
Score = 38.5 bits (88), Expect = 0.013
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 117 LTPVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVP 159
L P P AP+ PA V A P+ A PAP P PAP P
Sbjct: 178 LAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAP 220
Score = 36.6 bits (83), Expect = 0.050
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 105 ARSQTAQKSPRTLTPVPTSAPSLPQTPASVPASGPSWARL--PAPGPEPAPMGAPVPTSM 162
A S + + +L + + LP P PAS P + PAP P PAP+ APV +
Sbjct: 114 AVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPV 173
Query: 163 PCPVL 167
VL
Sbjct: 174 AVAVL 178
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 43.9 bits (102), Expect = 3e-04
Identities = 50/179 (27%), Positives = 67/179 (37%), Gaps = 34/179 (18%)
Query: 10 TEEEKTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPDRAQQQPQKP 69
T EE T P P P P K A T P P P +EP A P++P
Sbjct: 518 TPEEPT--PTTPEEPAPTTPKAA--APNTPKEPAPTTP---------KEP--APTTPKEP 562
Query: 70 AVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLT---PVPTS--- 123
A ++ +G L+ + A K + T K P + T P PT+
Sbjct: 563 APTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKG 622
Query: 124 -APSLPQTPASVPASGPSWARLPAP----GPEPAPMGAPVPTS--MPCPVLLGPALDLG 175
AP+ P+ PA P+ + PAP G P + P PT+ P P L P G
Sbjct: 623 TAPTTPKEPA------PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKG 675
Score = 37.7 bits (86), Expect = 0.023
Identities = 38/172 (22%), Positives = 57/172 (33%), Gaps = 15/172 (8%)
Query: 14 KTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRD----IGERREPDR----AQQQ 65
K P P P K PAP L P ++ ++ P A
Sbjct: 568 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 627
Query: 66 PQKPAVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLT---PVPT 122
P++PA + +G L+ + A K + T K P + T P PT
Sbjct: 628 PKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPT 687
Query: 123 S----APSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPVLLGP 170
+ AP+ P+ PA P+ P P + + P T P + P
Sbjct: 688 TPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSP 739
Score = 33.5 bits (75), Expect = 0.43
Identities = 39/169 (23%), Positives = 48/169 (28%), Gaps = 40/169 (23%)
Query: 18 PFLPSTPGPKKAKGGGEAVETHPAPGPL--PPPEVRDIGERREPDRAQQQPQKPAVAAGT 75
P P P P K PAP P P + A P+KPA
Sbjct: 256 PTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTT-- 313
Query: 76 QSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTS------------ 123
K A + + +P T P PT+
Sbjct: 314 -----------------PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKP 356
Query: 124 APSLPQTPASVPASGPSWARLPAPGP----EPAP---MGAPVPTSMPCP 165
AP+ P+ PA P+ P P EPAP AP T P P
Sbjct: 357 APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP 405
Score = 33.1 bits (74), Expect = 0.56
Identities = 43/166 (25%), Positives = 55/166 (33%), Gaps = 26/166 (15%)
Query: 18 PFLPSTPGPKKAKGGGEAVETHPAPG----PLPPPEVRDIGERREPDRAQQQPQKPAVAA 73
P P P P K PAP P P +EP A P++PA A
Sbjct: 295 PTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEP--APTTPKEPAPTA 352
Query: 74 GTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRT-LTPVPTSAPSLPQT-- 130
+ K A A + T + SP T P PT+ S P T
Sbjct: 353 PKKPAPT-----------TPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTK 401
Query: 131 -PA-SVPASGPSWARLPAP----GPEPAPMGAPVPTSMPCPVLLGP 170
PA + S P+ + P+P P P P PT+ P P
Sbjct: 402 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 447
Score = 32.7 bits (73), Expect = 0.73
Identities = 35/158 (22%), Positives = 54/158 (34%), Gaps = 28/158 (17%)
Query: 10 TEEEKTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPDRAQQQPQKP 69
T+E P P+ PKK A T P P P E +EP + P++P
Sbjct: 337 TKEPAPTTPKEPAPTAPKKP-----APTTPKEPAPTTPKEPAPT-TTKEP--SPTTPKEP 388
Query: 70 AVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTS--APSL 127
A + + + + +++A +P+ +P T AP+
Sbjct: 389 APTT------------------TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTT 430
Query: 128 PQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCP 165
P+ PA P+ P P AP T P P
Sbjct: 431 PKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAP 468
Score = 31.6 bits (70), Expect = 1.6
Identities = 36/160 (22%), Positives = 52/160 (32%), Gaps = 15/160 (9%)
Query: 14 KTVNPFLPSTPGPKKAKGGGEAVETHPAP-----GPLPPPE-----VRDIGERREPDRAQ 63
K +P P P P K + PAP P P E ++ + A
Sbjct: 378 KEPSPTTPKEPAPTTTKSAPTTTK-EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 436
Query: 64 QQPQKPAVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTS 123
P+KPA + + + A +TA +P+ LTP
Sbjct: 437 TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 496
Query: 124 --APSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTS 161
AP+ P+ PA P + A P P P PT+
Sbjct: 497 KLAPTTPEKPA--PTTPEELAPTTPEEPTPTTPEEPAPTT 534
Score = 31.6 bits (70), Expect = 1.6
Identities = 39/156 (25%), Positives = 56/156 (35%), Gaps = 16/156 (10%)
Query: 10 TEEEKTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPDRAQQQPQKP 69
T+E P P+ PKK A T P P P E ++ A P++P
Sbjct: 423 TKEPAPTTPKEPAPTTPKKP-----APTTPKEPAPTTPKEPAPTTTKKP---APTTPKEP 474
Query: 70 AVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTSAPSLPQ 129
A ++ + E + A + A +P TP P+ P
Sbjct: 475 APTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA-PT 533
Query: 130 TPASVPASGPSWARLPAPGP--EPAPM--GAPVPTS 161
TP A+ P+ + PAP EPAP P PT+
Sbjct: 534 TPK---AAAPNTPKEPAPTTPKEPAPTTPKEPAPTT 566
Score = 31.2 bits (69), Expect = 2.1
Identities = 38/154 (24%), Positives = 49/154 (31%), Gaps = 15/154 (9%)
Query: 24 PGPK-KAKGGGEAVETHPAPGPLPPPEVRDIGERRE-PDRAQQQPQKPAVAAGTQSLGNF 81
P PK + G A+ T P P P E + P + P P A T +
Sbjct: 197 PTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTT---- 252
Query: 82 RQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLT-PVPT---SAPSLPQTPASVPAS 137
K K A A + + +P T P PT SAP+ P+ PA
Sbjct: 253 -----KSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPK 307
Query: 138 GPSWARLPAPGPEPAPMGAPVPTSMPCPVLLGPA 171
P+ P P P P P PA
Sbjct: 308 KPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPA 341
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 43.9 bits (102), Expect = 3e-04
Identities = 50/179 (27%), Positives = 67/179 (37%), Gaps = 34/179 (18%)
Query: 10 TEEEKTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPDRAQQQPQKP 69
T EE T P P P P K A T P P P +EP A P++P
Sbjct: 559 TPEEPT--PTTPEEPAPTTPKAA--APNTPKEPAPTTP---------KEP--APTTPKEP 603
Query: 70 AVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLT---PVPTS--- 123
A ++ +G L+ + A K + T K P + T P PT+
Sbjct: 604 APTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKG 663
Query: 124 -APSLPQTPASVPASGPSWARLPAP----GPEPAPMGAPVPTS--MPCPVLLGPALDLG 175
AP+ P+ PA P+ + PAP G P + P PT+ P P L P G
Sbjct: 664 TAPTTPKEPA------PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKG 716
Score = 37.7 bits (86), Expect = 0.023
Identities = 38/172 (22%), Positives = 57/172 (33%), Gaps = 15/172 (8%)
Query: 14 KTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRD----IGERREPDR----AQQQ 65
K P P P K PAP L P ++ ++ P A
Sbjct: 609 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 668
Query: 66 PQKPAVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLT---PVPT 122
P++PA + +G L+ + A K + T K P + T P PT
Sbjct: 669 PKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPT 728
Query: 123 S----APSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPVLLGP 170
+ AP+ P+ PA P+ P P + + P T P + P
Sbjct: 729 TPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSP 780
Score = 33.5 bits (75), Expect = 0.43
Identities = 39/169 (23%), Positives = 48/169 (28%), Gaps = 40/169 (23%)
Query: 18 PFLPSTPGPKKAKGGGEAVETHPAPGPL--PPPEVRDIGERREPDRAQQQPQKPAVAAGT 75
P P P P K PAP P P + A P+KPA
Sbjct: 297 PTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTT-- 354
Query: 76 QSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTS------------ 123
K A + + +P T P PT+
Sbjct: 355 -----------------PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKP 397
Query: 124 APSLPQTPASVPASGPSWARLPAPGP----EPAP---MGAPVPTSMPCP 165
AP+ P+ PA P+ P P EPAP AP T P P
Sbjct: 398 APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP 446
Score = 33.1 bits (74), Expect = 0.56
Identities = 43/166 (25%), Positives = 55/166 (33%), Gaps = 26/166 (15%)
Query: 18 PFLPSTPGPKKAKGGGEAVETHPAPG----PLPPPEVRDIGERREPDRAQQQPQKPAVAA 73
P P P P K PAP P P +EP A P++PA A
Sbjct: 336 PTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEP--APTTPKEPAPTA 393
Query: 74 GTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRT-LTPVPTSAPSLPQT-- 130
+ K A A + T + SP T P PT+ S P T
Sbjct: 394 PKKPAPT-----------TPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTK 442
Query: 131 -PA-SVPASGPSWARLPAP----GPEPAPMGAPVPTSMPCPVLLGP 170
PA + S P+ + P+P P P P PT+ P P
Sbjct: 443 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 488
Score = 32.7 bits (73), Expect = 0.73
Identities = 35/158 (22%), Positives = 54/158 (34%), Gaps = 28/158 (17%)
Query: 10 TEEEKTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPDRAQQQPQKP 69
T+E P P+ PKK A T P P P E +EP + P++P
Sbjct: 378 TKEPAPTTPKEPAPTAPKKP-----APTTPKEPAPTTPKEPAPT-TTKEP--SPTTPKEP 429
Query: 70 AVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTS--APSL 127
A + + + + +++A +P+ +P T AP+
Sbjct: 430 APTT------------------TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTT 471
Query: 128 PQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCP 165
P+ PA P+ P P AP T P P
Sbjct: 472 PKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAP 509
Score = 31.6 bits (70), Expect = 1.6
Identities = 36/160 (22%), Positives = 52/160 (32%), Gaps = 15/160 (9%)
Query: 14 KTVNPFLPSTPGPKKAKGGGEAVETHPAP-----GPLPPPE-----VRDIGERREPDRAQ 63
K +P P P P K + PAP P P E ++ + A
Sbjct: 419 KEPSPTTPKEPAPTTTKSAPTTTK-EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 477
Query: 64 QQPQKPAVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTS 123
P+KPA + + + A +TA +P+ LTP
Sbjct: 478 TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 537
Query: 124 --APSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTS 161
AP+ P+ PA P + A P P P PT+
Sbjct: 538 KLAPTTPEKPA--PTTPEELAPTTPEEPTPTTPEEPAPTT 575
Score = 31.6 bits (70), Expect = 1.6
Identities = 39/156 (25%), Positives = 56/156 (35%), Gaps = 16/156 (10%)
Query: 10 TEEEKTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPDRAQQQPQKP 69
T+E P P+ PKK A T P P P E ++ A P++P
Sbjct: 464 TKEPAPTTPKEPAPTTPKKP-----APTTPKEPAPTTPKEPAPTTTKKP---APTTPKEP 515
Query: 70 AVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTSAPSLPQ 129
A ++ + E + A + A +P TP P+ P
Sbjct: 516 APTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA-PT 574
Query: 130 TPASVPASGPSWARLPAPGP--EPAPM--GAPVPTS 161
TP A+ P+ + PAP EPAP P PT+
Sbjct: 575 TPK---AAAPNTPKEPAPTTPKEPAPTTPKEPAPTT 607
Score = 31.2 bits (69), Expect = 2.1
Identities = 38/154 (24%), Positives = 49/154 (31%), Gaps = 15/154 (9%)
Query: 24 PGPK-KAKGGGEAVETHPAPGPLPPPEVRDIGERRE-PDRAQQQPQKPAVAAGTQSLGNF 81
P PK + G A+ T P P P E + P + P P A T +
Sbjct: 238 PTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTT---- 293
Query: 82 RQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLT-PVPT---SAPSLPQTPASVPAS 137
K K A A + + +P T P PT SAP+ P+ PA
Sbjct: 294 -----KSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPK 348
Query: 138 GPSWARLPAPGPEPAPMGAPVPTSMPCPVLLGPA 171
P+ P P P P P PA
Sbjct: 349 KPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPA 382
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 43.9 bits (102), Expect = 3e-04
Identities = 50/179 (27%), Positives = 67/179 (37%), Gaps = 34/179 (18%)
Query: 10 TEEEKTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPDRAQQQPQKP 69
T EE T P P P P K A T P P P +EP A P++P
Sbjct: 611 TPEEPT--PTTPEEPAPTTPKAA--APNTPKEPAPTTP---------KEP--APTTPKEP 655
Query: 70 AVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLT---PVPTS--- 123
A ++ +G L+ + A K + T K P + T P PT+
Sbjct: 656 APTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKG 715
Query: 124 -APSLPQTPASVPASGPSWARLPAP----GPEPAPMGAPVPTS--MPCPVLLGPALDLG 175
AP+ P+ PA P+ + PAP G P + P PT+ P P L P G
Sbjct: 716 TAPTTPKEPA------PTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKG 768
Score = 37.7 bits (86), Expect = 0.023
Identities = 38/172 (22%), Positives = 57/172 (33%), Gaps = 15/172 (8%)
Query: 14 KTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRD----IGERREPDR----AQQQ 65
K P P P K PAP L P ++ ++ P A
Sbjct: 661 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 720
Query: 66 PQKPAVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLT---PVPT 122
P++PA + +G L+ + A K + T K P + T P PT
Sbjct: 721 PKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPT 780
Query: 123 S----APSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPVLLGP 170
+ AP+ P+ PA P+ P P + + P T P + P
Sbjct: 781 TPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSP 832
Score = 33.5 bits (75), Expect = 0.43
Identities = 39/169 (23%), Positives = 48/169 (28%), Gaps = 40/169 (23%)
Query: 18 PFLPSTPGPKKAKGGGEAVETHPAPGPL--PPPEVRDIGERREPDRAQQQPQKPAVAAGT 75
P P P P K PAP P P + A P+KPA
Sbjct: 349 PTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTT-- 406
Query: 76 QSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTS------------ 123
K A + + +P T P PT+
Sbjct: 407 -----------------PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKP 449
Query: 124 APSLPQTPASVPASGPSWARLPAPGP----EPAP---MGAPVPTSMPCP 165
AP+ P+ PA P+ P P EPAP AP T P P
Sbjct: 450 APTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP 498
Score = 33.1 bits (74), Expect = 0.56
Identities = 43/166 (25%), Positives = 55/166 (33%), Gaps = 26/166 (15%)
Query: 18 PFLPSTPGPKKAKGGGEAVETHPAPG----PLPPPEVRDIGERREPDRAQQQPQKPAVAA 73
P P P P K PAP P P +EP A P++PA A
Sbjct: 388 PTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEP--APTTPKEPAPTA 445
Query: 74 GTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRT-LTPVPTSAPSLPQT-- 130
+ K A A + T + SP T P PT+ S P T
Sbjct: 446 PKKPAPT-----------TPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTK 494
Query: 131 -PA-SVPASGPSWARLPAP----GPEPAPMGAPVPTSMPCPVLLGP 170
PA + S P+ + P+P P P P PT+ P P
Sbjct: 495 EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 540
Score = 32.7 bits (73), Expect = 0.73
Identities = 35/158 (22%), Positives = 54/158 (34%), Gaps = 28/158 (17%)
Query: 10 TEEEKTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPDRAQQQPQKP 69
T+E P P+ PKK A T P P P E +EP + P++P
Sbjct: 430 TKEPAPTTPKEPAPTAPKKP-----APTTPKEPAPTTPKEPAPT-TTKEP--SPTTPKEP 481
Query: 70 AVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTS--APSL 127
A + + + + +++A +P+ +P T AP+
Sbjct: 482 APTT------------------TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTT 523
Query: 128 PQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCP 165
P+ PA P+ P P AP T P P
Sbjct: 524 PKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAP 561
Score = 31.6 bits (70), Expect = 1.6
Identities = 36/160 (22%), Positives = 52/160 (32%), Gaps = 15/160 (9%)
Query: 14 KTVNPFLPSTPGPKKAKGGGEAVETHPAP-----GPLPPPE-----VRDIGERREPDRAQ 63
K +P P P P K + PAP P P E ++ + A
Sbjct: 471 KEPSPTTPKEPAPTTTKSAPTTTK-EPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 529
Query: 64 QQPQKPAVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTS 123
P+KPA + + + A +TA +P+ LTP
Sbjct: 530 TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 589
Query: 124 --APSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTS 161
AP+ P+ PA P + A P P P PT+
Sbjct: 590 KLAPTTPEKPA--PTTPEELAPTTPEEPTPTTPEEPAPTT 627
Score = 31.6 bits (70), Expect = 1.6
Identities = 39/156 (25%), Positives = 56/156 (35%), Gaps = 16/156 (10%)
Query: 10 TEEEKTVNPFLPSTPGPKKAKGGGEAVETHPAPGPLPPPEVRDIGERREPDRAQQQPQKP 69
T+E P P+ PKK A T P P P E ++ A P++P
Sbjct: 516 TKEPAPTTPKEPAPTTPKKP-----APTTPKEPAPTTPKEPAPTTTKKP---APTTPKEP 567
Query: 70 AVAAGTQSLGNFRQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLTPVPTSAPSLPQ 129
A ++ + E + A + A +P TP P+ P
Sbjct: 568 APTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA-PT 626
Query: 130 TPASVPASGPSWARLPAPGP--EPAPM--GAPVPTS 161
TP A+ P+ + PAP EPAP P PT+
Sbjct: 627 TPK---AAAPNTPKEPAPTTPKEPAPTTPKEPAPTT 659
Score = 31.2 bits (69), Expect = 2.1
Identities = 38/154 (24%), Positives = 49/154 (31%), Gaps = 15/154 (9%)
Query: 24 PGPK-KAKGGGEAVETHPAPGPLPPPEVRDIGERRE-PDRAQQQPQKPAVAAGTQSLGNF 81
P PK + G A+ T P P P E + P + P P A T +
Sbjct: 290 PTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTT---- 345
Query: 82 RQGFMKCLLEVEKMEASHRRASKARSQTAQKSPRTLT-PVPT---SAPSLPQTPASVPAS 137
K K A A + + +P T P PT SAP+ P+ PA
Sbjct: 346 -----KSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPK 400
Query: 138 GPSWARLPAPGPEPAPMGAPVPTSMPCPVLLGPA 171
P+ P P P P P PA
Sbjct: 401 KPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPA 434
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,545,511
Number of Sequences: 37866
Number of extensions: 1298681
Number of successful extensions: 15166
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 696
Number of HSP's that attempted gapping in prelim test: 9217
Number of HSP's gapped (non-prelim): 4569
length of query: 469
length of database: 18,247,518
effective HSP length: 106
effective length of query: 363
effective length of database: 14,233,722
effective search space: 5166841086
effective search space used: 5166841086
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.