Guide to the Human Genome
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Name: ZFHX3 Sequence: fasta or formatted (3703aa) NCBI GI: 118498345
Description:

AT-binding transcription factor 1

Referenced in:

Homeobox and Related Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5        276           7
 C cysteine            2.2         82           2
 D aspartate           4.3        160           2
 E glutamate           7.2        268          15
 F phenylalanine       2.9        108           2
 G glycine             6.3        232          14
 H histidine           2.8        102           2
 I isoleucine          2.6         96           2
 K lysine              6.1        225           2
 L leucine             9.3        345           2
 M methionine          2.2         80           2
 N asparagine          4.1        153           2
 P proline             9.1        337          12
 Q glutamine           7.9        291          19
 R arginine            3.5        129           2
 S serine             10.5        388           4
 T threonine           5.3        197           3
 V valine              3.8        139           2
 W tryptophan          0.4         15           1
 Y tyrosine            2.2         80           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   AT-binding transcription factor 1 
ZFHX4                 0.483   zinc finger homeodomain 4 
ZFHX2                 0.068   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.068   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.068   PREDICTED: zinc finger homeobox 2 
TRERF1                0.008   transcriptional regulating factor 1 
MED15                 0.008   mediator complex subunit 15 isoform b 
MED15                 0.007   mediator complex subunit 15 isoform a 
MLL2                  0.006   myeloid/lymphoid or mixed-lineage leukemia 2 
TOX3                  0.006   TOX high mobility group box family member 3 isoform...
TOX3                  0.006   TOX high mobility group box family member 3 isoform...
TRIO                  0.006   triple functional domain (PTPRF interacting) 
PCLO                  0.006   piccolo isoform 2 
PCLO                  0.006   piccolo isoform 1 
WIPF3                 0.006   WAS/WASL interacting protein family, member 3 [Homo...
BRD4                  0.006   bromodomain-containing protein 4 isoform long 
PROP1                 0.006   PROP paired-like homeobox 1 
LHX6                  0.006   LIM homeobox protein 6 isoform 2 
LHX6                  0.006   LIM homeobox protein 6 isoform 1 
CIZ1                  0.006   CDKN1A interacting zinc finger protein 1 isoform 4 ...
CIZ1                  0.006   CDKN1A interacting zinc finger protein 1 isoform 2 ...
ZNF674                0.006   zinc finger family member 674 isoform 2 
ZNF674                0.006   zinc finger family member 674 isoform 1 
MAML2                 0.005   mastermind-like 2 
LHX4                  0.005   LIM homeobox protein 4 
FOXP2                 0.005   forkhead box P2 isoform I 
FOXP2                 0.005   forkhead box P2 isoform III 
FOXP2                 0.005   forkhead box P2 isoform II 
CIZ1                  0.005   CDKN1A interacting zinc finger protein 1 isoform 1 ...
CIZ1                  0.005   CDKN1A interacting zinc finger protein 1 isoform 1 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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