Guide to the Human Genome
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Name: MAP7 Sequence: fasta or formatted (749aa) NCBI GI: 4505101
Description:

microtubule-associated protein 7

Referenced in:

Tubulins and Microtubules

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         72           2
 C cysteine            0.3          2           1
 D aspartate           3.1         23           2
 E glutamate          13.1         98           3
 F phenylalanine       0.8          6           1
 G glycine             4.5         34           2
 H histidine           2.0         15           1
 I isoleucine          2.3         17           2
 K lysine              6.5         49           2
 L leucine             6.4         48           2
 M methionine          1.1          8           1
 N asparagine          3.3         25           3
 P proline             8.8         66           3
 Q glutamine           4.7         35           2
 R arginine           12.1         91           3
 S serine              8.9         67           4
 T threonine           5.1         38           2
 V valine              6.0         45           2
 W tryptophan          0.7          5           1
 Y tyrosine            0.7          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microtubule-associated protein 7 
MAP7D1                0.253   MAP7 domain containing 1 
MAP7D2                0.176   MAP7 domain containing 2 
MAP7D3                0.090   MAP7 domain containing 3 
TCHH                  0.045   trichohyalin 
GIGYF2                0.044   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.044   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.044   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.044   GRB10 interacting GYF protein 2 isoform b 
LOC100133599          0.044   PREDICTED: hypothetical protein 
LOC100133599          0.041   PREDICTED: hypothetical protein 
CALD1                 0.039   caldesmon 1 isoform 1 
INCENP                0.039   inner centromere protein antigens 135/155kDa isofor...
EIF3A                 0.039   eukaryotic translation initiation factor 3, subunit 1...
INCENP                0.038   inner centromere protein antigens 135/155kDa isofor...
NEFH                  0.038   neurofilament, heavy polypeptide 200kDa 
ZC3H13                0.038   zinc finger CCCH-type containing 13 
MAP4K4                0.037   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.037   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.037   mitogen-activated protein kinase kinase kinase kinas...
LOC100133758          0.037   PREDICTED: hypothetical protein, partial 
ACIN1                 0.036   apoptotic chromatin condensation inducer 1 
LOC283685             0.036   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC400352             0.036   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.036   PREDICTED: similar to Putative golgin subfamily A m...
SAFB2                 0.036   scaffold attachment factor B2 
CHAF1A                0.036   chromatin assembly factor 1, subunit A (p150) 
LOC100286959          0.035   PREDICTED: hypothetical protein XP_002343921 
LOC283685             0.035   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC100133220          0.035   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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