Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: AEBP1 Sequence: fasta or formatted (1158aa) NCBI GI: 53692189
Description:

adipocyte enhancer binding protein 1 precursor

Referenced in:

Adipose Tissue
Carboxypeptidases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         73           3
 C cysteine            1.1         13           1
 D aspartate           5.0         58           2
 E glutamate          11.9        138           7
 F phenylalanine       2.9         34           2
 G glycine             6.9         80           2
 H histidine           1.9         22           2
 I isoleucine          3.6         42           2
 K lysine              6.0         69           2
 L leucine             7.1         82           5
 M methionine          1.9         22           1
 N asparagine          3.5         41           3
 P proline            10.9        126           4
 Q glutamine           3.4         39           2
 R arginine            6.4         74           4
 S serine              4.1         48           2
 T threonine           7.2         83           3
 V valine              4.8         56           2
 W tryptophan          1.8         21           1
 Y tyrosine            3.2         37           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adipocyte enhancer binding protein 1 precursor [Homo... 
CPXM2                 0.316   carboxypeptidase X (M14 family), member 2 
CPXM1                 0.265   carboxypeptidase X, member 1 precursor 
CPN1                  0.136   carboxypeptidase N, polypeptide 1 precursor 
CPE                   0.133   carboxypeptidase E preproprotein 
CPZ                   0.132   carboxypeptidase Z isoform 3 
CPZ                   0.132   carboxypeptidase Z isoform 2 precursor 
CPZ                   0.132   carboxypeptidase Z isoform 1 
CPD                   0.119   carboxypeptidase D precursor 
CPM                   0.080   carboxypeptidase M precursor 
CPM                   0.080   carboxypeptidase M precursor 
CPM                   0.080   carboxypeptidase M precursor 
F8                    0.032   coagulation factor VIII isoform b precursor 
F8                    0.032   coagulation factor VIII isoform a precursor 
EDIL3                 0.032   EGF-like repeats and discoidin I-like domains-contai...
NRP1                  0.030   neuropilin 1 isoform c 
NRP1                  0.030   neuropilin 1 isoform b 
NRP1                  0.030   neuropilin 1 isoform a 
F5                    0.028   coagulation factor V precursor 
NRP2                  0.028   neuropilin 2 isoform 3 precursor 
NRP2                  0.028   neuropilin 2 isoform 5 precursor 
NRP2                  0.028   neuropilin 2 isoform 1 precursor 
NRP2                  0.028   neuropilin 2 isoform 6 precursor 
NRP2                  0.028   neuropilin 2 isoform 4 precursor 
NRP2                  0.028   neuropilin 2 isoform 2 precursor 
TTN                   0.028   titin isoform N2-A 
PRB2                  0.027   proline-rich protein BstNI subfamily 2 
DDR2                  0.026   discoidin domain receptor family, member 2 precursor...
DDR2                  0.026   discoidin domain receptor family, member 2 precursor...
MFGE8                 0.026   milk fat globule-EGF factor 8 protein isoform a [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press