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Search of human proteins with 38016916
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38016916 syndecan binding protein 2 isoform b [Homo sapiens]
(207 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|134152672 syndecan binding protein 2 isoform a [Homo sapiens] 414 e-116
gi|38016916 syndecan binding protein 2 isoform b [Homo sapiens] 414 e-116
gi|55749523 syntenin isoform 3 [Homo sapiens] 298 2e-81
gi|55749515 syntenin isoform 3 [Homo sapiens] 298 2e-81
gi|55749504 syntenin isoform 2 [Homo sapiens] 298 2e-81
gi|55749490 syntenin isoform 1 [Homo sapiens] 298 2e-81
gi|56243522 syntenin isoform 1 [Homo sapiens] 298 2e-81
gi|22035548 amyloid beta A4 precursor protein-binding, family A,... 67 8e-12
gi|11342678 amyloid beta (A4) precursor protein-binding, family ... 66 2e-11
gi|194353992 amyloid beta A4 precursor protein-binding, family A... 58 5e-09
gi|22035550 amyloid beta A4 precursor protein-binding, family A,... 58 5e-09
gi|112382257 InaD-like [Homo sapiens] 45 6e-05
gi|194018553 solute carrier family 9 isoform 3 regulator 2 isofo... 44 7e-05
gi|71897229 solute carrier family 9 isoform 3 regulator 2 isofor... 44 7e-05
gi|4557529 post-synaptic density protein 95 isoform 1 [Homo sapi... 44 1e-04
gi|192447426 post-synaptic density protein 95 isoform 2 [Homo sa... 44 1e-04
gi|218156340 chapsyn-110 isoform 3 [Homo sapiens] 43 2e-04
gi|218156338 chapsyn-110 isoform 1 [Homo sapiens] 43 2e-04
gi|91199538 chapsyn-110 isoform 2 [Homo sapiens] 43 2e-04
gi|95089461 discs large homolog 5 [Homo sapiens] 43 2e-04
gi|11993943 Tax1 binding protein 3 [Homo sapiens] 43 2e-04
gi|21361142 PDZ domain containing 1 [Homo sapiens] 42 5e-04
gi|45827729 scribble isoform b [Homo sapiens] 41 8e-04
gi|45827731 scribble isoform a [Homo sapiens] 41 8e-04
gi|119943108 synapse-associated protein 102 isoform b [Homo sapi... 40 0.001
gi|119943106 synapse-associated protein 102 isoform a [Homo sapi... 40 0.001
gi|148539628 discs, large homolog 1 isoform 1 [Homo sapiens] 40 0.002
gi|148539578 discs, large homolog 1 isoform 2 [Homo sapiens] 40 0.002
gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithora... 39 0.004
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora... 39 0.004
>gi|134152672 syndecan binding protein 2 isoform a [Homo sapiens]
Length = 292
Score = 414 bits (1063), Expect = e-116
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG 60
MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG
Sbjct: 86 MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG 145
Query: 61 LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHVGF 120
LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHVGF
Sbjct: 146 LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHVGF 205
Query: 121 VIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIP 180
VIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIP
Sbjct: 206 VIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIP 265
Query: 181 SVIYEHMVKKLPPVLLHHTMDHSIPDA 207
SVIYEHMVKKLPPVLLHHTMDHSIPDA
Sbjct: 266 SVIYEHMVKKLPPVLLHHTMDHSIPDA 292
>gi|38016916 syndecan binding protein 2 isoform b [Homo sapiens]
Length = 207
Score = 414 bits (1063), Expect = e-116
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG 60
MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG
Sbjct: 1 MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG 60
Query: 61 LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHVGF 120
LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHVGF
Sbjct: 61 LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHVGF 120
Query: 121 VIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIP 180
VIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIP
Sbjct: 121 VIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIP 180
Query: 181 SVIYEHMVKKLPPVLLHHTMDHSIPDA 207
SVIYEHMVKKLPPVLLHHTMDHSIPDA
Sbjct: 181 SVIYEHMVKKLPPVLLHHTMDHSIPDA 207
>gi|55749523 syntenin isoform 3 [Homo sapiens]
Length = 297
Score = 298 bits (764), Expect = 2e-81
Identities = 136/206 (66%), Positives = 177/206 (85%)
Query: 1 MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG 60
MVAPVTG +G+RRAEIK G+RE+ LCKD+ GK GLRL+ +D G+FVQLVQAN+PASLVG
Sbjct: 91 MVAPVTGNDVGIRRAEIKQGIREVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVG 150
Query: 61 LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHVGF 120
LRFGDQ+LQI+G +CAGWSS KAH+V+K+A G+KI + +RDRPF+RT+TMHKDS GHVGF
Sbjct: 151 LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDRPFERTITMHKDSTGHVGF 210
Query: 121 VIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIP 180
+ K GKI S+VK SSAARNGLLT H +CE++GQNVIGLKD +I +IL+T+G VVT+TI+P
Sbjct: 211 IFKNGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP 270
Query: 181 SVIYEHMVKKLPPVLLHHTMDHSIPD 206
+ I+EH++K++ P ++ MDH+IP+
Sbjct: 271 AFIFEHIIKRMAPSIMKSLMDHTIPE 296
>gi|55749515 syntenin isoform 3 [Homo sapiens]
Length = 297
Score = 298 bits (764), Expect = 2e-81
Identities = 136/206 (66%), Positives = 177/206 (85%)
Query: 1 MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG 60
MVAPVTG +G+RRAEIK G+RE+ LCKD+ GK GLRL+ +D G+FVQLVQAN+PASLVG
Sbjct: 91 MVAPVTGNDVGIRRAEIKQGIREVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVG 150
Query: 61 LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHVGF 120
LRFGDQ+LQI+G +CAGWSS KAH+V+K+A G+KI + +RDRPF+RT+TMHKDS GHVGF
Sbjct: 151 LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDRPFERTITMHKDSTGHVGF 210
Query: 121 VIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIP 180
+ K GKI S+VK SSAARNGLLT H +CE++GQNVIGLKD +I +IL+T+G VVT+TI+P
Sbjct: 211 IFKNGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP 270
Query: 181 SVIYEHMVKKLPPVLLHHTMDHSIPD 206
+ I+EH++K++ P ++ MDH+IP+
Sbjct: 271 AFIFEHIIKRMAPSIMKSLMDHTIPE 296
>gi|55749504 syntenin isoform 2 [Homo sapiens]
Length = 292
Score = 298 bits (764), Expect = 2e-81
Identities = 136/206 (66%), Positives = 177/206 (85%)
Query: 1 MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG 60
MVAPVTG +G+RRAEIK G+RE+ LCKD+ GK GLRL+ +D G+FVQLVQAN+PASLVG
Sbjct: 86 MVAPVTGNDVGIRRAEIKQGIREVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVG 145
Query: 61 LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHVGF 120
LRFGDQ+LQI+G +CAGWSS KAH+V+K+A G+KI + +RDRPF+RT+TMHKDS GHVGF
Sbjct: 146 LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDRPFERTITMHKDSTGHVGF 205
Query: 121 VIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIP 180
+ K GKI S+VK SSAARNGLLT H +CE++GQNVIGLKD +I +IL+T+G VVT+TI+P
Sbjct: 206 IFKNGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP 265
Query: 181 SVIYEHMVKKLPPVLLHHTMDHSIPD 206
+ I+EH++K++ P ++ MDH+IP+
Sbjct: 266 AFIFEHIIKRMAPSIMKSLMDHTIPE 291
>gi|55749490 syntenin isoform 1 [Homo sapiens]
Length = 298
Score = 298 bits (764), Expect = 2e-81
Identities = 136/206 (66%), Positives = 177/206 (85%)
Query: 1 MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG 60
MVAPVTG +G+RRAEIK G+RE+ LCKD+ GK GLRL+ +D G+FVQLVQAN+PASLVG
Sbjct: 92 MVAPVTGNDVGIRRAEIKQGIREVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVG 151
Query: 61 LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHVGF 120
LRFGDQ+LQI+G +CAGWSS KAH+V+K+A G+KI + +RDRPF+RT+TMHKDS GHVGF
Sbjct: 152 LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDRPFERTITMHKDSTGHVGF 211
Query: 121 VIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIP 180
+ K GKI S+VK SSAARNGLLT H +CE++GQNVIGLKD +I +IL+T+G VVT+TI+P
Sbjct: 212 IFKNGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP 271
Query: 181 SVIYEHMVKKLPPVLLHHTMDHSIPD 206
+ I+EH++K++ P ++ MDH+IP+
Sbjct: 272 AFIFEHIIKRMAPSIMKSLMDHTIPE 297
>gi|56243522 syntenin isoform 1 [Homo sapiens]
Length = 298
Score = 298 bits (764), Expect = 2e-81
Identities = 136/206 (66%), Positives = 177/206 (85%)
Query: 1 MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG 60
MVAPVTG +G+RRAEIK G+RE+ LCKD+ GK GLRL+ +D G+FVQLVQAN+PASLVG
Sbjct: 92 MVAPVTGNDVGIRRAEIKQGIREVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVG 151
Query: 61 LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHVGF 120
LRFGDQ+LQI+G +CAGWSS KAH+V+K+A G+KI + +RDRPF+RT+TMHKDS GHVGF
Sbjct: 152 LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDRPFERTITMHKDSTGHVGF 211
Query: 121 VIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIP 180
+ K GKI S+VK SSAARNGLLT H +CE++GQNVIGLKD +I +IL+T+G VVT+TI+P
Sbjct: 212 IFKNGKITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP 271
Query: 181 SVIYEHMVKKLPPVLLHHTMDHSIPD 206
+ I+EH++K++ P ++ MDH+IP+
Sbjct: 272 AFIFEHIIKRMAPSIMKSLMDHTIPE 297
>gi|22035548 amyloid beta A4 precursor protein-binding, family A,
member 1 [Homo sapiens]
Length = 837
Score = 67.4 bits (163), Expect = 8e-12
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 55 PASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVV--VVRDRPFQRTVTMH 111
PA G L GDQ++ I+G G ++K V +VR P +
Sbjct: 693 PAEKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKGLKNQSRVKLNIVRCPPVTTVLIRR 752
Query: 112 KDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAG 171
D +GF ++ G I SL++G A R G+ H + E++GQ+V+ +KI+ IL+ A
Sbjct: 753 PDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAV 812
Query: 172 NVVTLTIIPSVIYEHMVKKLPPVLL 196
+ + +P+ +Y + + PV +
Sbjct: 813 GEIHMKTMPAAMYRLLTAQEQPVYI 837
>gi|11342678 amyloid beta (A4) precursor protein-binding, family A,
member 3 [Homo sapiens]
Length = 575
Score = 65.9 bits (159), Expect = 2e-11
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 12/185 (6%)
Query: 22 REIHLCKDERGKTGLRLRKVDQG---LFVQLVQANT----PASLVG-LRFGDQLLQIDGR 73
RE+HL ++R GL + V+ G L V AN PA G L GD+L I+G
Sbjct: 393 REVHL--EKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGT 450
Query: 74 DCAGWSSHKAHQVVKKASGDKIVV--VVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLV 131
G V++ V +V P + + +GF ++ G I SL+
Sbjct: 451 SLVGLPLAACQAAVRETKSQTSVTLSIVHCPPVTTAIIHRPHAREQLGFCVEDGIICSLL 510
Query: 132 KGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEHMVKKL 191
+G A R G+ H + E++GQ+V+ +I+E+L A V + +P+ Y + +
Sbjct: 511 RGGIAERGGIRVGHRIIEINGQSVVATPHARIIELLTEAYGEVHIKTMPAATYRLLTGQE 570
Query: 192 PPVLL 196
PV L
Sbjct: 571 QPVYL 575
>gi|194353992 amyloid beta A4 precursor protein-binding, family A,
member 2 isoform b [Homo sapiens]
Length = 737
Score = 58.2 bits (139), Expect = 5e-09
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 55 PASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVV--VVRDRPFQRTVTMH 111
PA+ G L GDQ++ I+G G ++K V +V P +
Sbjct: 593 PAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVTTVLIKR 652
Query: 112 KDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAG 171
D +GF ++ G I SL++G A R G+ H + E++GQ+V+ +KI++ L+ +
Sbjct: 653 PDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSV 712
Query: 172 NVVTLTIIPSVIYEHMVKKLPPVLL 196
+ + +P+ ++ + + P+ +
Sbjct: 713 GEIHMKTMPAAMFRLLTGQETPLYI 737
>gi|22035550 amyloid beta A4 precursor protein-binding, family A,
member 2 isoform a [Homo sapiens]
Length = 749
Score = 58.2 bits (139), Expect = 5e-09
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Query: 55 PASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVV--VVRDRPFQRTVTMH 111
PA+ G L GDQ++ I+G G ++K V +V P +
Sbjct: 605 PAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVTTVLIKR 664
Query: 112 KDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAG 171
D +GF ++ G I SL++G A R G+ H + E++GQ+V+ +KI++ L+ +
Sbjct: 665 PDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSV 724
Query: 172 NVVTLTIIPSVIYEHMVKKLPPVLL 196
+ + +P+ ++ + + P+ +
Sbjct: 725 GEIHMKTMPAAMFRLLTGQETPLYI 749
>gi|112382257 InaD-like [Homo sapiens]
Length = 1801
Score = 44.7 bits (104), Expect = 6e-05
Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 48/206 (23%)
Query: 21 VREIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWS 79
V E+ L D G + G+ V+ + A G L+ GD +L+I G + G +
Sbjct: 246 VEEVELINDGSGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMT 305
Query: 80 SHKAHQVVKKASGDKIVVVVRDRPFQRTVT------------------------------ 109
S + QV++ ++V RD +VT
Sbjct: 306 SEQVAQVLRNCGNSVRMLVARDPAGDISVTPPAPAALPVALPTVASKGPGSDSSLFETYN 365
Query: 110 ---MHKDS-------MGHVGFVIKKGK-----IVSLVKGSSAARNG-LLTNHYVCEVDGQ 153
+ KD +G+VG G+ + S++ GS+A NG + N + VDG
Sbjct: 366 VELVRKDGQSLGIRIVGYVG-TSHTGEASGIYVKSIIPGSAAYHNGHIQVNDKIVAVDGV 424
Query: 154 NVIGLKDKKIMEILATAGNVVTLTII 179
N+ G + ++E+L AG VV LT++
Sbjct: 425 NIQGFANHDVVEVLRNAGQVVHLTLV 450
Score = 37.0 bits (84), Expect = 0.012
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 38/195 (19%)
Query: 22 REIHLCKDERGKTG------LRLRKVDQG---LFVQLVQANTPASL-VGLRFGDQLLQID 71
R+I ER TG + LR + G +FV+ VQ + A L+ DQ+L I+
Sbjct: 130 RQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAIN 189
Query: 72 GRDCAGWSSHK-AHQVVKKASGDKIVVVVRDRPFQRTVTMHKDS---------MGHV--- 118
SH+ A ++++ +G ++V R+ ++ T + GHV
Sbjct: 190 HTPLDQNISHQQAIALLQQTTGSLRLIVAREPVHTKSSTSSSLNDTTLPETVCWGHVEEV 249
Query: 119 ---------GFVIKKGK-----IVSLVKGSSAARNGLL-TNHYVCEVDGQNVIGLKDKKI 163
GF I GK + ++V G A R+G L T ++ ++ G NV G+ +++
Sbjct: 250 ELINDGSGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQV 309
Query: 164 MEILATAGNVVTLTI 178
++L GN V + +
Sbjct: 310 AQVLRNCGNSVRMLV 324
Score = 36.6 bits (83), Expect = 0.015
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 23 EIHLCKDERGKTGLRLR------KVDQGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDC 75
E+H+ + E+ K GL L + +FV + PA+ G +R GD+LL+I+ +
Sbjct: 1236 ELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQIL 1295
Query: 76 AGWSSHKAHQVVKKASGDKIVVVVRD 101
G S A ++K A +V +R+
Sbjct: 1296 YGRSHQNASAIIKTAPSKVKLVFIRN 1321
Score = 33.9 bits (76), Expect = 0.100
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 15/130 (11%)
Query: 64 GDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQR--------TVTMHKDSM 115
GDQ+L+++G D S +A +++ +VV RD R V + K +
Sbjct: 1482 GDQILEVNGVDLRNSSHEEAITALRQTPQKVRLVVYRDEAHYRDEENLEIFPVDLQKKAG 1541
Query: 116 GHVGFVI---KKGK---IVSLVKGSSAARNG-LLTNHYVCEVDGQNVIGLKDKKIMEILA 168
+G I + G I +VKG +A +G L+ + V+G+++ + + IL
Sbjct: 1542 RGLGLSIVGKRNGSGVFISDIVKGGAADLDGRLIQGDQILSVNGEDMRNASQETVATILK 1601
Query: 169 TAGNVVTLTI 178
A +V L I
Sbjct: 1602 CAQGLVQLEI 1611
Score = 30.0 bits (66), Expect = 1.4
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 42 DQGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVR 100
D +F+ ++QA+ A+ L+ GD+++ I+G+ G S ++K A G I+ VV
Sbjct: 1701 DIPVFIAMIQASGVAARTQKLKVGDRIVSINGQPLDGLSHADVVNLLKNAYGRIILQVVA 1760
Query: 101 D 101
D
Sbjct: 1761 D 1761
>gi|194018553 solute carrier family 9 isoform 3 regulator 2
isoform a [Homo sapiens]
Length = 337
Score = 44.3 bits (103), Expect = 7e-05
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 26 LCKDERGKTG----LRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSH 81
LC+ RG+ G L K +G F++ V+ +PA LR GD+L++++G + G + H
Sbjct: 11 LCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHH 70
Query: 82 KAHQVVKKASGDKIVVVV 99
+ Q +K G ++VV
Sbjct: 71 QVVQRIKAVEGQTRLLVV 88
Score = 36.2 bits (82), Expect = 0.020
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 74 DCAGWSSHKAHQVVKKASGDKIVVVVRD-RPFQRTVTMHKDSMGHVGFVIKKGK------ 126
D A SH + K SG +R+ RP R + K G+ GF + K
Sbjct: 124 DWAHTGSHSSEAGKKDVSGP-----LRELRP--RLCHLRKGPQGY-GFNLHSDKSRPGQY 175
Query: 127 IVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEH 186
I S+ GS AAR+GL + EV+GQNV GL+ +++ + + L ++ EH
Sbjct: 176 IRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEH 235
Score = 32.7 bits (73), Expect = 0.22
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 16 EIKPGVREIHLCKDERGKT-GLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRD 74
E++P R HL K +G L K G +++ V +PA+ GLR D+L++++G++
Sbjct: 146 ELRP--RLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQN 203
Query: 75 CAGWSSHKAHQVVKKASGDKIVVVV---RDRPFQR 106
G + +K + ++VV D F+R
Sbjct: 204 VEGLRHAEVVASIKAREDEARLLVVDPETDEHFKR 238
>gi|71897229 solute carrier family 9 isoform 3 regulator 2 isoform
b [Homo sapiens]
Length = 326
Score = 44.3 bits (103), Expect = 7e-05
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 26 LCKDERGKTG----LRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSH 81
LC+ RG+ G L K +G F++ V+ +PA LR GD+L++++G + G + H
Sbjct: 11 LCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHH 70
Query: 82 KAHQVVKKASGDKIVVVV 99
+ Q +K G ++VV
Sbjct: 71 QVVQRIKAVEGQTRLLVV 88
Score = 36.2 bits (82), Expect = 0.020
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 74 DCAGWSSHKAHQVVKKASGDKIVVVVRD-RPFQRTVTMHKDSMGHVGFVIKKGK------ 126
D A SH + K SG +R+ RP R + K G+ GF + K
Sbjct: 124 DWAHTGSHSSEAGKKDVSGP-----LRELRP--RLCHLRKGPQGY-GFNLHSDKSRPGQY 175
Query: 127 IVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEH 186
I S+ GS AAR+GL + EV+GQNV GL+ +++ + + L ++ EH
Sbjct: 176 IRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEH 235
Score = 32.7 bits (73), Expect = 0.22
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 16 EIKPGVREIHLCKDERGKT-GLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRD 74
E++P R HL K +G L K G +++ V +PA+ GLR D+L++++G++
Sbjct: 146 ELRP--RLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQN 203
Query: 75 CAGWSSHKAHQVVKKASGDKIVVVV---RDRPFQR 106
G + +K + ++VV D F+R
Sbjct: 204 VEGLRHAEVVASIKAREDEARLLVVDPETDEHFKR 238
>gi|4557529 post-synaptic density protein 95 isoform 1 [Homo
sapiens]
Length = 767
Score = 43.9 bits (102), Expect = 1e-04
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 31 RGKTGLRLRKVD----QGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQ 85
RG TGL V +G+F+ + A PA L G LR GDQ+L ++G D +SH+
Sbjct: 361 RGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRN-ASHEQAA 419
Query: 86 VVKKASGDKIVVVVRDRP 103
+ K +G + ++ + +P
Sbjct: 420 IALKNAGQTVTIIAQYKP 437
>gi|192447426 post-synaptic density protein 95 isoform 2 [Homo
sapiens]
Length = 721
Score = 43.9 bits (102), Expect = 1e-04
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 31 RGKTGLRLRKVD----QGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQ 85
RG TGL V +G+F+ + A PA L G LR GDQ+L ++G D +SH+
Sbjct: 315 RGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRN-ASHEQAA 373
Query: 86 VVKKASGDKIVVVVRDRP 103
+ K +G + ++ + +P
Sbjct: 374 IALKNAGQTVTIIAQYKP 391
>gi|218156340 chapsyn-110 isoform 3 [Homo sapiens]
Length = 749
Score = 43.1 bits (100), Expect = 2e-04
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 31 RGKTGLRLRKVD----QGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQ 85
+G TGL V +G+FV + A PA L G L+ GDQ+L ++G D G +SH+
Sbjct: 323 KGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELQRGDQILSVNGIDLRG-ASHEQAA 381
Query: 86 VVKKASGDKIVVVVRDRP 103
K +G + ++ + +P
Sbjct: 382 AALKGAGQTVTIIAQYQP 399
>gi|218156338 chapsyn-110 isoform 1 [Homo sapiens]
Length = 975
Score = 43.1 bits (100), Expect = 2e-04
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 31 RGKTGLRLRKVD----QGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQ 85
+G TGL V +G+FV + A PA L G L+ GDQ+L ++G D G +SH+
Sbjct: 531 KGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELQRGDQILSVNGIDLRG-ASHEQAA 589
Query: 86 VVKKASGDKIVVVVRDRP 103
K +G + ++ + +P
Sbjct: 590 AALKGAGQTVTIIAQYQP 607
>gi|91199538 chapsyn-110 isoform 2 [Homo sapiens]
Length = 870
Score = 43.1 bits (100), Expect = 2e-04
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 31 RGKTGLRLRKVD----QGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQ 85
+G TGL V +G+FV + A PA L G L+ GDQ+L ++G D G +SH+
Sbjct: 426 KGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELQRGDQILSVNGIDLRG-ASHEQAA 484
Query: 86 VVKKASGDKIVVVVRDRP 103
K +G + ++ + +P
Sbjct: 485 AALKGAGQTVTIIAQYQP 502
>gi|95089461 discs large homolog 5 [Homo sapiens]
Length = 1919
Score = 42.7 bits (99), Expect = 2e-04
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 9 SLGVRRAEIKPGVREIHLCKDERGKTGLRLRKVDQ---GLFVQLVQANTPASLVGLRFGD 65
SLG RR + +P V E K ++G L + V G++V V + A GL +GD
Sbjct: 1334 SLGERRKD-RPYVEEPRHVKVQKGSEPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGD 1392
Query: 66 QLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHV 118
QLL+ +G + + +A ++ + D I ++ + P ++ H S H+
Sbjct: 1393 QLLEFNGINLRSATEQQARLIIGQQC-DTITILAQYNPHVHQLSSHSRSSSHL 1444
>gi|11993943 Tax1 binding protein 3 [Homo sapiens]
Length = 124
Score = 42.7 bits (99), Expect = 2e-04
Identities = 20/69 (28%), Positives = 40/69 (57%)
Query: 40 KVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVV 99
K D+G++V V PA + GL+ GD+++Q++G D + +A + + K S + + ++V
Sbjct: 50 KTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLV 109
Query: 100 RDRPFQRTV 108
+ Q+ V
Sbjct: 110 TRQSLQKAV 118
>gi|21361142 PDZ domain containing 1 [Homo sapiens]
Length = 519
Score = 41.6 bits (96), Expect = 5e-04
Identities = 44/205 (21%), Positives = 84/205 (40%), Gaps = 47/205 (22%)
Query: 22 REIHLCKDERGKTG--LRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWS 79
RE L K E G LR+ K +G V++V+ +PA GL+ GD++L+I+G
Sbjct: 8 RECKLSKQEGQNYGFFLRIEKDTEGHLVRVVEKCSPAEKAGLQDGDRVLRINGVFVDKEE 67
Query: 80 SHKAHQVVKKASGDKIVVVVRDRPFQRTVTMHKD-------------------------- 113
+ +V+K+ ++V+ +++ V D
Sbjct: 68 HMQVVDLVRKSGNSVTLLVLDGDSYEKAVKTRVDLKELGQSQKEQGLSDNILSPVMNGGV 127
Query: 114 -------------SMGHVGFVIK--KGK----IVSLVKGSSAARNGLLTNHYVCEVDGQN 154
G GF +K +GK + + A R G+L + ++ EV+G+N
Sbjct: 128 QTWTQPRLCYLVKEGGSYGFSLKTVQGKKGVYMTDITPQGVAMRAGVLADDHLIEVNGEN 187
Query: 155 VIGLKDKKIMEILATAGNVVTLTII 179
V ++++E + +G+ V ++
Sbjct: 188 VEDASHEEVVEKVKKSGSRVMFLLV 212
Score = 33.9 bits (76), Expect = 0.100
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 127 IVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTIIPSVIYEH 186
I + KG A GL + EV+G NV+ +K+++ + ++G VTL + Y++
Sbjct: 403 IKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGKKAYDY 462
Query: 187 -MVKKLPPV 194
KK+P V
Sbjct: 463 FQAKKIPIV 471
Score = 32.7 bits (73), Expect = 0.22
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 110 MHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLLTNHYVCEVDGQNVIGLKDKKIMEILAT 169
+ KD+ GH+ V++K S A + GL V ++G V + ++++++
Sbjct: 26 IEKDTEGHLVRVVEKC--------SPAEKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRK 77
Query: 170 AGNVVTLTIIPSVIYEHMVK 189
+GN VTL ++ YE VK
Sbjct: 78 SGNSVTLLVLDGDSYEKAVK 97
>gi|45827729 scribble isoform b [Homo sapiens]
Length = 1630
Score = 40.8 bits (94), Expect = 8e-04
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 32 GKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKAS 91
GK + D+G+F+ V PA+ G+R GD+LL+++G G H+A + ++ A
Sbjct: 745 GKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAG 804
Query: 92 GDKIVVVVRDR 102
+ V R+R
Sbjct: 805 TAVQMRVWRER 815
Score = 40.0 bits (92), Expect = 0.001
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 1 MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLR------------KVDQGLFVQ 48
++ P SL VRR PG+RE+ + K + G+ +R D+G+F+
Sbjct: 1078 LLRPCLELSLLVRRDPAPPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFIS 1137
Query: 49 LVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRD 101
V A G LR G +LL+++ + G + +A Q+++ GD + V+V D
Sbjct: 1138 KVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSV-GDTLTVLVCD 1190
Score = 39.7 bits (91), Expect = 0.002
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 19/156 (12%)
Query: 42 DQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRD 101
+ G+F+ V A+ GLR GD++L ++G+D + +A + + + ++V RD
Sbjct: 1033 EPGVFISKVLPRGLAARSGLRVGDRILAVNGQDVRDATHQEAVSALLRPCLELSLLVRRD 1092
Query: 102 -------------RPFQRT-VTMHKDSMGHVG---FVIKKGKIVSLVKGSSAA-RNG-LL 142
P +R +++ + GH G +G +S V + AA R+G L
Sbjct: 1093 PAPPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLR 1152
Query: 143 TNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTI 178
+ EV+ Q+++GL + +++L + G+ +T+ +
Sbjct: 1153 VGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLV 1188
>gi|45827731 scribble isoform a [Homo sapiens]
Length = 1655
Score = 40.8 bits (94), Expect = 8e-04
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 32 GKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKAS 91
GK + D+G+F+ V PA+ G+R GD+LL+++G G H+A + ++ A
Sbjct: 745 GKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAG 804
Query: 92 GDKIVVVVRDR 102
+ V R+R
Sbjct: 805 TAVQMRVWRER 815
Score = 40.0 bits (92), Expect = 0.001
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 1 MVAPVTGYSLGVRRAEIKPGVREIHLCKDERGKTGLRLR------------KVDQGLFVQ 48
++ P SL VRR PG+RE+ + K + G+ +R D+G+F+
Sbjct: 1078 LLRPCLELSLLVRRDPAPPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFIS 1137
Query: 49 LVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRD 101
V A G LR G +LL+++ + G + +A Q+++ GD + V+V D
Sbjct: 1138 KVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSV-GDTLTVLVCD 1190
Score = 39.7 bits (91), Expect = 0.002
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 19/156 (12%)
Query: 42 DQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHKAHQVVKKASGDKIVVVVRD 101
+ G+F+ V A+ GLR GD++L ++G+D + +A + + + ++V RD
Sbjct: 1033 EPGVFISKVLPRGLAARSGLRVGDRILAVNGQDVRDATHQEAVSALLRPCLELSLLVRRD 1092
Query: 102 -------------RPFQRT-VTMHKDSMGHVG---FVIKKGKIVSLVKGSSAA-RNG-LL 142
P +R +++ + GH G +G +S V + AA R+G L
Sbjct: 1093 PAPPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLR 1152
Query: 143 TNHYVCEVDGQNVIGLKDKKIMEILATAGNVVTLTI 178
+ EV+ Q+++GL + +++L + G+ +T+ +
Sbjct: 1153 VGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLV 1188
>gi|119943108 synapse-associated protein 102 isoform b [Homo
sapiens]
Length = 512
Score = 40.4 bits (93), Expect = 0.001
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 17 IKPG--VREIHLCKDERGKTGLRLRKVD----QGLFVQLVQANTPASLVG-LRFGDQLLQ 69
++PG RE +G TGL V +G+FV + A PA L G LR GD++L
Sbjct: 38 LRPGGDAREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILS 97
Query: 70 IDGRDCAGWSSHKAHQVVKKASGDKIVVVVRDRP 103
++G + + +A +K+A G + +V + RP
Sbjct: 98 VNGVNLRNATHEQAAAALKRA-GQSVTIVAQYRP 130
>gi|119943106 synapse-associated protein 102 isoform a [Homo
sapiens]
Length = 817
Score = 40.0 bits (92), Expect = 0.001
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 31 RGKTGLRLRKVD----QGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQ 85
+G TGL V +G+FV + A PA L G LR GD++L ++G + + +A
Sbjct: 391 KGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAA 450
Query: 86 VVKKASGDKIVVVVRDRP 103
+K+A G + +V + RP
Sbjct: 451 ALKRA-GQSVTIVAQYRP 467
>gi|148539628 discs, large homolog 1 isoform 1 [Homo sapiens]
Length = 904
Score = 39.7 bits (91), Expect = 0.002
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 31 RGKTGLRLRKVD----QGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQ 85
RG TGL V +G+F+ + A PA L G LR GD+++ ++ D +SH+
Sbjct: 471 RGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRA-ASHEQAA 529
Query: 86 VVKKASGDKIVVVVRDRP 103
K +G + +V + RP
Sbjct: 530 AALKNAGQAVTIVAQYRP 547
>gi|148539578 discs, large homolog 1 isoform 2 [Homo sapiens]
Length = 926
Score = 39.7 bits (91), Expect = 0.002
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 31 RGKTGLRLRKVD----QGLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQ 85
RG TGL V +G+F+ + A PA L G LR GD+++ ++ D +SH+
Sbjct: 471 RGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDRIISVNSVDLRA-ASHEQAA 529
Query: 86 VVKKASGDKIVVVVRDRP 103
K +G + +V + RP
Sbjct: 530 AALKNAGQAVTIVAQYRP 547
>gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 1 [Homo
sapiens]
Length = 1834
Score = 38.5 bits (88), Expect = 0.004
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 99 VRDRPFQRTVTMHKDSMGHVGFVIKKGK--------IVSLVKGSSAARNG-LLTNHYVCE 149
+R P TVT+ K + + V KG + S+VKG +A +G L +
Sbjct: 1000 LRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLS 1059
Query: 150 VDGQNVIGLKDKKIMEILATAGNVVTLTI 178
VDG++++GL ++ E++ +VVTL +
Sbjct: 1060 VDGRSLVGLSQERAAELMTRTSSVVTLEV 1088
Score = 33.1 bits (74), Expect = 0.17
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 44 GLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKAS 91
G++V+ V A + G L GDQLL +DGR G S +A +++ + S
Sbjct: 1033 GIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTS 1081
>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 2 [Homo
sapiens]
Length = 1651
Score = 38.5 bits (88), Expect = 0.004
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 99 VRDRPFQRTVTMHKDSMGHVGFVIKKGK--------IVSLVKGSSAARNG-LLTNHYVCE 149
+R P TVT+ K + + V KG + S+VKG +A +G L +
Sbjct: 1001 LRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLS 1060
Query: 150 VDGQNVIGLKDKKIMEILATAGNVVTLTI 178
VDG++++GL ++ E++ +VVTL +
Sbjct: 1061 VDGRSLVGLSQERAAELMTRTSSVVTLEV 1089
Score = 33.1 bits (74), Expect = 0.17
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 44 GLFVQLVQANTPASLVG-LRFGDQLLQIDGRDCAGWSSHKAHQVVKKAS 91
G++V+ V A + G L GDQLL +DGR G S +A +++ + S
Sbjct: 1034 GIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTS 1082
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,451,612
Number of Sequences: 37866
Number of extensions: 281004
Number of successful extensions: 867
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 676
Number of HSP's gapped (non-prelim): 239
length of query: 207
length of database: 18,247,518
effective HSP length: 98
effective length of query: 109
effective length of database: 14,536,650
effective search space: 1584494850
effective search space used: 1584494850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.